; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G016830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G016830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPeptide deformylase
Genome locationCmo_Chr11:11933129..11936448
RNA-Seq ExpressionCmoCh11G016830
SyntenyCmoCh11G016830
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0018206 - peptidyl-methionine modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042586 - peptide deformylase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR023635 - Peptide deformylase
IPR036821 - Peptide deformylase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152139.1 peptide deformylase 1B, chloroplastic [Momordica charantia]1.9e-12982.09Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLHLSL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD A                       ++ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFG
        IYADV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFG

XP_022928203.1 peptide deformylase 1B, chloroplastic [Cucurbita moschata]4.9e-14691.95Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVAS                       +ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

XP_022989167.1 peptide deformylase 1B, chloroplastic [Cucurbita maxima]2.1e-14490.6Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLH+SLPHALLPTLSRRSALPAVLRRLSRFSSTG LLSNSSKFRPPTTLVYAQAKRGFSTKEDDVAS                       +ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKT+LFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

XP_023530509.1 peptide deformylase 1B, chloroplastic [Cucurbita pepo subsp. pepo]6.0e-14490.94Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLHLSLPHALLPTLSRRSALP VLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVAS                       +ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGL SPERIENLRTRKKVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

XP_038904020.1 peptide deformylase 1B, chloroplastic [Benincasa hispida]2.1e-12881.54Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        M YT RLHLSL HALLPT+SRR +LPAV RRLS F  TG+  S+ SKFRPP+T+VYAQAKRGFS KEDDVA                        + DLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPL+IVEYPD ILRAKNKRIDSFDDNLKKLV+EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+VYRYSKKTVLFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADV+RPESVKIDARDISGTRFM NLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIRPQLQALEKKYED+TGLPSPERIEN RTR KVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

TrEMBL top hitse value%identityAlignment
A0A0A0LG66 Peptide deformylase2.3e-12580.54Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAY  RLH+SLPHALLPT+S   + PAV RRLS FSST +L S+SSKF+ P+TLVYAQAKRGFS KEDDVAS                       + DLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPL+IVEYPDPILRAKNKRI SFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFN VGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADV+RPES+KIDARDISGTRFMVNLSGL ARVFQHEFDHLQG LFFDRMTDEVL+TIRPQLQALEKKYEDRTGLPSPERIEN   R+KV AGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

A0A1S3B8C2 Peptide deformylase2.3e-12580.54Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYT RLH+SLP ALLPT+S   + P V RRLS FSST  L+S+SSKFR P+TLVYAQAKRGF  KEDDVAS                       + DLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTV FNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADV+RPES+KIDARDI GTRFMVNLSGL ARVFQHEFDHLQG+LFFDRMTDEVL+TIRPQLQALEKKYEDRTGLPSPERIEN   R+KVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

A0A6J1DF55 Peptide deformylase9.1e-13082.09Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLHLSL HALLP   RR ALPAV RRLS FSST +  S+SSK RPP+TLVYAQAKRGFS KEDD A                       ++ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPL+IVEYPDPILRAKNKRIDSFDDNLKKLV EMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNP+V+RYSKKTVLFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFG
        IYADV+RPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQG+LFFDRMTDEVLDTIR QLQALEKKYE+RTGLPSPERIEN RT+KKVAAG+G
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFG

A0A6J1EN89 Peptide deformylase2.4e-14691.95Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVAS                       +ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

A0A6J1JF23 Peptide deformylase1.0e-14490.6Show/hide
Query:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE
        MAYTARLH+SLPHALLPTLSRRSALPAVLRRLSRFSSTG LLSNSSKFRPPTTLVYAQAKRGFSTKEDDVAS                       +ADLE
Subjt:  MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLE

Query:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS
        FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKT+LFNEGCLSFP 
Subjt:  FEAPLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPS

Query:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
Subjt:  IYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

SwissProt top hitse value%identityAlignment
Q5VNN5 Peptide deformylase 1B, chloroplastic1.2e-7856.84Show/hide
Query:  ARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAP
        ARLHL L   L    S  + L A   R    S  G +            L  A+A+RGF +    VA+        FAT            AADL+FE P
Subjt:  ARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAP

Query:  LQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYAD
        L++V+YPDPILRA+NKRI++FDDNL+ L  EMFDVMYKTDGIGLSAPQVGVNVQLMVFNP G +GEGEEIVLVNP VY+ SK+ +++ EGCLSFP IYA+
Subjt:  LQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYAD

Query:  VQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRK
        V RP++VKIDA+D++G +  V LSGL ARVFQHEFDHLQG+LFFDRM+ +VL+++R  L+ LEKKYE+ TGL SPE IEN + RK
Subjt:  VQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRK

Q7NIF5 Peptide deformylase 23.4e-3345Show/hide
Query:  PLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA
        PL I    D +LR  +K+I   +D ++KL Q+M   MY  DGIGL+APQVGVN +++V +   E      +VL+NP + ++S    +  EGCLS PSIYA
Subjt:  PLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA

Query:  DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL
        DV+RPE V    RD++G    +  +GL AR  QHE DHL GVLF DR+ +++   + PQL
Subjt:  DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQL

Q7UHZ5 Peptide deformylase2.4e-3441.14Show/hide
Query:  PLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA
        PL I+ +P P LR  ++ I   D  LK +  EM D+MY+ DG+GL+A QV + +++ V NP G+R EGE  V++NP++ R  K      EGCLS P +Y 
Subjt:  PLQIVEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYA

Query:  DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPS
         V+RP++V++   D+ G      L G  ARV QHE DHL G++FFDR+ +E L  +   L+  +  YE + G  S
Subjt:  DVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPS

Q9FUZ2 Peptide deformylase 1B, chloroplastic/mitochondrial2.0e-8961.32Show/hide
Query:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY
        L   LLP LSRR+    +     R  ST    S  ++  P T+ V A+ KR  S K+D VAS                       A D++FE PL+IVEY
Subjt:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY

Query:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES
        PDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+S
Subjt:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES

Query:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK
        VKIDARDI+G RF ++LS LPAR+FQHE+DHL+GVLFFDRMTD+VLD+IR +L+ALEKKYE++TGLPSPER+E  R ++K   GFGK
Subjt:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK

Q9FV54 Peptide deformylase 1B, chloroplastic7.8e-9463.23Show/hide
Query:  SLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFS--TKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQI
        S    L P LSR S+   +   L R+ S   L  ++S  +PP   VYAQA+R  S  TK D++A+                        ADL F  PL+I
Subjt:  SLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFS--TKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQI

Query:  VEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQR
        VEYPDPILRAKNKRID+FD NLKKLV EMFD+MYKTDGIGLSAPQVG+NVQLMVFN  GERGEGEEIVLVNP+V RYS++ + + EGCLSFP I+ DV+R
Subjt:  VEYPDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQR

Query:  PESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS
        PESVK+DA+DI+GTRF ++LS LPARVFQHEFDHLQGVLFFD+MTDEVLDTIR +L ALEKKYEDRTGLP+PE I N R  KK A GFGKS
Subjt:  PESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS

Arabidopsis top hitse value%identityAlignment
AT1G15390.1 peptide deformylase 1A2.1e-2234.5Show/hide
Query:  QIVEYPDPILRAKNKRIDSFD---DNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPKVYRYSKKT
        +IV   DP+L  K + +D  +   + ++K++ +M  VM    G+GL+APQ+GV ++++V                   ER   + +V+VNP +   S K 
Subjt:  QIVEYPDPILRAKNKRIDSFD---DNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNP--------------VGERGEGEEIVLVNPKVYRYSKKT

Query:  VLFNEGCLSFPSIYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTI
         LF EGCLS     A V+R   V +   D  G R  VN SG  AR+ QHE DHL G L+ D+M      T+
Subjt:  VLFNEGCLSFPSIYADVQRPESVKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTI

AT5G14660.1 peptide deformylase 1B1.4e-9061.32Show/hide
Query:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY
        L   LLP LSRR+    +     R  ST    S  ++  P T+ V A+ KR  S K+D VAS                       A D++FE PL+IVEY
Subjt:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY

Query:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES
        PDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+S
Subjt:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES

Query:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK
        VKIDARDI+G RF ++LS LPAR+FQHE+DHL+GVLFFDRMTD+VLD+IR +L+ALEKKYE++TGLPSPER+E  R ++K   GFGK
Subjt:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK

AT5G14660.2 peptide deformylase 1B1.4e-9061.32Show/hide
Query:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY
        L   LLP LSRR+    +     R  ST    S  ++  P T+ V A+ KR  S K+D VAS                       A D++FE PL+IVEY
Subjt:  LPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY

Query:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES
        PDPILRAKNKRID FD+NLK LV  MFDVMYKTDGIGLSAPQVG+NVQLMVFNP GE GEG+EIVLVNPK+ +YS K V F+EGCLSFP IYA+V RP+S
Subjt:  PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPES

Query:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK
        VKIDARDI+G RF ++LS LPAR+FQHE+DHL+GVLFFDRMTD+VLD+IR +L+ALEKKYE++TGLPSPER+E  R ++K   GFGK
Subjt:  VKIDARDISGTRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACACTGCTCGATTGCACCTTTCTCTCCCTCACGCTCTTCTTCCAACTTTATCCCGCCGGTCGGCTCTTCCCGCCGTTCTCCGCCGGCTGAGCCGTTTTTCCTC
AACAGGCGAGTTATTATCCAATTCAAGTAAGTTCAGACCTCCGACGACTCTGGTTTACGCGCAGGCCAAACGAGGCTTCTCGACAAAAGAAGACGATGTAGCTTCGTGTA
AGCTGAAACCTCGAATATCGTTCGCAACTTGTTTGTGCTATCTCTTTTCTTCAACTCTTCGCATAGCTGCTGATCTTGAATTTGAGGCGCCGCTCCAAATTGTGGAATAT
CCGGACCCAATACTCAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGTTAGTGCAGGAAATGTTTGATGTAATGTACAAAACTGATGGCATTGG
GCTCTCAGCTCCTCAAGTGGGAGTCAATGTTCAACTGATGGTATTCAATCCAGTCGGTGAACGCGGTGAAGGGGAGGAAATTGTTCTTGTGAACCCTAAAGTTTACAGAT
ATTCCAAGAAAACTGTACTGTTTAATGAAGGTTGCCTATCATTCCCCAGCATATATGCTGATGTACAGAGACCAGAATCGGTTAAGATCGATGCACGAGACATCAGTGGT
ACGAGGTTCATGGTCAACTTGTCAGGGCTTCCTGCAAGAGTGTTCCAGCATGAATTTGATCATTTGCAGGGAGTTTTGTTCTTTGACAGAATGACAGATGAAGTACTTGA
TACCATTCGCCCTCAGCTACAAGCCCTAGAAAAGAAGTACGAAGATAGAACTGGATTACCAAGCCCGGAAAGAATAGAGAACCTTAGAACAAGGAAGAAGGTGGCTGCTG
GTTTTGGAAAATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTACACTGCTCGATTGCACCTTTCTCTCCCTCACGCTCTTCTTCCAACTTTATCCCGCCGGTCGGCTCTTCCCGCCGTTCTCCGCCGGCTGAGCCGTTTTTCCTC
AACAGGCGAGTTATTATCCAATTCAAGTAAGTTCAGACCTCCGACGACTCTGGTTTACGCGCAGGCCAAACGAGGCTTCTCGACAAAAGAAGACGATGTAGCTTCGTGTA
AGCTGAAACCTCGAATATCGTTCGCAACTTGTTTGTGCTATCTCTTTTCTTCAACTCTTCGCATAGCTGCTGATCTTGAATTTGAGGCGCCGCTCCAAATTGTGGAATAT
CCGGACCCAATACTCAGAGCAAAGAATAAGCGTATTGATTCATTTGATGATAATCTGAAGAAGTTAGTGCAGGAAATGTTTGATGTAATGTACAAAACTGATGGCATTGG
GCTCTCAGCTCCTCAAGTGGGAGTCAATGTTCAACTGATGGTATTCAATCCAGTCGGTGAACGCGGTGAAGGGGAGGAAATTGTTCTTGTGAACCCTAAAGTTTACAGAT
ATTCCAAGAAAACTGTACTGTTTAATGAAGGTTGCCTATCATTCCCCAGCATATATGCTGATGTACAGAGACCAGAATCGGTTAAGATCGATGCACGAGACATCAGTGGT
ACGAGGTTCATGGTCAACTTGTCAGGGCTTCCTGCAAGAGTGTTCCAGCATGAATTTGATCATTTGCAGGGAGTTTTGTTCTTTGACAGAATGACAGATGAAGTACTTGA
TACCATTCGCCCTCAGCTACAAGCCCTAGAAAAGAAGTACGAAGATAGAACTGGATTACCAAGCCCGGAAAGAATAGAGAACCTTAGAACAAGGAAGAAGGTGGCTGCTG
GTTTTGGAAAATCATGATCATAGAGGTTTGATGATTATACATTACGAATTTGAATGCTACTAACTCCAATGATAGGAAGAAATTTGTGCTTCAGTTGGCTAAGCTTTTGT
AAGAATTAAATCTCATGGAG
Protein sequenceShow/hide protein sequence
MAYTARLHLSLPHALLPTLSRRSALPAVLRRLSRFSSTGELLSNSSKFRPPTTLVYAQAKRGFSTKEDDVASCKLKPRISFATCLCYLFSSTLRIAADLEFEAPLQIVEY
PDPILRAKNKRIDSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPSIYADVQRPESVKIDARDISG
TRFMVNLSGLPARVFQHEFDHLQGVLFFDRMTDEVLDTIRPQLQALEKKYEDRTGLPSPERIENLRTRKKVAAGFGKS