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CmoCh11G017010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G017010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxilin-related protein 2 isoform X2
Genome locationCmo_Chr11:12048251..12067147
RNA-Seq ExpressionCmoCh11G017010
SyntenyCmoCh11G017010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589135.1 DDB1- and CUL4-associated factor 13, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1179.59Show/hide
Query:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ
        +MK+REEKRTANS+VI IGSDNRVG+NKA  LDEVIAWAKE QLVLS++
Subjt:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1071.93Show/hide
Query:  EEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLLV
        EE RT NSYVI   SDNR GKNKA  LDEVIAWA EKQ VLS++  G FSHLLG+LV
Subjt:  EEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLLV

KAG6600651.1 hypothetical protein SDJN03_05884, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0968.33Show/hide
Query:  MKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLL
        MK REE+RT NSY+I IGSDNR GKNKA A D VIA  KE QLVLS++  G FSHLL +L
Subjt:  MKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLL

KAG7022833.1 hypothetical protein SDJN02_16569, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1181.25Show/hide
Query:  MKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ
        MK+REEKRTANS+VI IGSDNRVG+NKA  LDEVIAWAKE QLVLS++
Subjt:  MKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-1067.8Show/hide
Query:  EEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLLVMM
        EE RT NSYVI   SDNR GKNKA  LDEVIAWA EKQ VLS++  G FSHLLG+L+++
Subjt:  EEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLLVMM

TrEMBL top hitse value%identityAlignment
A0A6J1CXD8 uncharacterized protein LOC111015698 isoform X35.2e-0461.9Show/hide
Query:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK
        ++   +E    +SYVI IGSDNR G N+A ALDEVIAWAKEK
Subjt:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK

A0A6J1IJU2 putative tyrosine-protein phosphatase auxilin isoform X23.1e-0469.23Show/hide
Query:  NREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK
        + EE    +SYVI IGSDNR G N+A ALDEVIAWAKEK
Subjt:  NREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK

A0A6J1IL14 uncharacterized protein LOC111478006 isoform X12.7e-0867.35Show/hide
Query:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ
        ++KNREE++T NS VI IG+DN  GKN+  ALDEVIAWAKEKQ VLS++
Subjt:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQ

A0A6J1IM87 putative tyrosine-protein phosphatase auxilin isoform X13.1e-0469.23Show/hide
Query:  NREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK
        + EE    +SYVI IGSDNR G N+A ALDEVIAWAKEK
Subjt:  NREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEK

A0A6J1ING1 uncharacterized protein LOC111478006 isoform X27.0e-0965.38Show/hide
Query:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGG
        ++KNREE++T NS VI IG+DN  GKN+  ALDEVIAWAKEKQ VLS++  G
Subjt:  MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAAATAGAGAAGAGAAGAGAACGGCGAACTCTTATGTCATTGCGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGGTGCTCTTGATGAAGTGATTGC
TTGGGCAAAAGAAAAACAGTTGGTCCTGTCAATTCAGGCCGGTGGGAGGTTTTCGCATCTGCTAGGATTACTGGTCATGATGATTGAATGGACGATATGA
mRNA sequenceShow/hide mRNA sequence
CGCGGGGATCATATATATCGCTCCCGCATCCACACACTCTTCTTCGGGTCACATTCTCACACTAGAATCAGAGCGCTCCATCAACGGCCTCTTCCCTTCTGAACGTTCCT
TGCCGAATTCAACCGCTAGATAATTACCAAGCAATCGGAGGAAGAGAGAGCAGAATCGAAAGGAGTTTCTCGCCTGATCCCGATGATGAAAAATAGAGAAGAGAAGAGAA
CGGCGAACTCTTATGTCATTGCGATTGGTTCCGATAACAGAGTGGGGAAGAACAAAGCAGGTGCTCTTGATGAAGTGATTGCTTGGGCAAAAGAAAAACAGTTGGTCCTG
TCAATTCAGGCCGGTGGGAGGTTTTCGCATCTGCTAGGATTACTGGTCATGATGATTGAATGGACGATATGAGATATATACTAGTGTCTGGATCAATTTTTGAGACTGAT
TTGAGTCTGGGGCAAAATGATGGCAATCAATTTGTTGAAATCGAAGGACGGTCCGGTTCATGTAAAGTTTGTTGTAAACAATTAGGGATGCATGAAATATAACCACACAA
CCCACTACGATGGAAATGGAGGACATAGATCTAATAAAGTTGTGTTCAAGGAATCCAACTCTGGTTGCTACATTCAACACTCCATCAAACGGAGATGGATTGTTAGAGCC
GATATTCTTTTTCGAATAGCATAATCAAAGTTTAGTGTTGAACCGGTCAGCTAAATCCCAGGTACTCATACATCTTGATTGACCCATGGTTAGTTCCCTTTGTATTTTGC
ATTATTTTTATGAATTTATAAACTTTATAGTGGCTCGATAAGCTGTGTGTTGTTAAAGAGTTGAATTAGCAATATTTTTATAATCGAGTTTTCTCGTTTATTTTTTTTTT
AATGATACAAAGAG
Protein sequenceShow/hide protein sequence
MMKNREEKRTANSYVIAIGSDNRVGKNKAGALDEVIAWAKEKQLVLSIQAGGRFSHLLGLLVMMIEWTI