CuGenDBv2

Gene ID	CmoCh11G017090
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	HMA domain-containing protein
Genome location	Cmo_Chr11:12134972..12137989
RNA-Seq Expression	CmoCh11G017090
Synteny	CmoCh11G017090
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006121 - Heavy metal-associated domain, HMA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6588977.1 hypothetical protein SDJN03_17542, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-85

98.89

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFPIFRSSISLH+SSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

KAG7015253.1 hypothetical protein SDJN02_22887 [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-85

99.44

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_022928515.1 uncharacterized protein LOC111435303 [Cucurbita moschata]

1.0e-85

100

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_022989147.1 uncharacterized protein LOC111486304 [Cucurbita maxima]

1.2e-81

94.44

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFP+FRSSISLHTS+NFA +AA+FRHSAVYGHRQ RGL+KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

XP_023529800.1 uncharacterized protein LOC111792515 [Cucurbita pepo subsp. pepo]

8.0e-83

96.11

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFP+FRSSISLHTS+NFA SAASFRHSAVYGHRQ RGLK RRAVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D9Q3 uncharacterized protein LOC111018338

9.3e-53

72.83

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-----ETPAVTVSVSPSDML
        MASISTF   HS+SRP  ANP    I   SISL T SN + +AASFR+S V G R+ R LK+  AVE +A++PEQEVEGE     E PAVTV VSPSD+L
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-----ETPAVTVSVSPSDML

Query:  TMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVF
        TMFFQAEGTLNE+AIPSVTEALEQTEG T LKV+VVEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSF+D EEVF
Subjt:  TMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVF

A0A6J1ERV9 uncharacterized protein LOC111435303

4.9e-86

100

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1F3X5 uncharacterized protein LOC111441946

5.6e-58

74.87

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD
        MASIS FP  HSVSRPA ANP+  PI R S +L +SS+F VSAASF HSAV G  + RGLK+ R VE +AS+PEQ VEGE       E PAVTV VS SD
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD

Query:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        +LTMFFQAEGTLNESA+PSVTEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIETIQ AGFKLQTLNLSFED EEVFV
Subjt:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1J0J2 uncharacterized protein LOC111482359

4.8e-57

73.8

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD
        MASIS FP  HSVSRPA ANP+  PIFR S +L +SS+F VSAA+FRHSA  G  + RGLK+ R VE +AS+PEQ  EGE       E PAVTV VS SD
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGE-------ETPAVTVSVSPSD

Query:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        +LTMFFQAEGTLNESA+PSVTEALEQT+G T LKVQ+VEGIASVELTKQ TIQSTGVASSLIE IQ AGFKLQTLNLSFED EEVFV
Subjt:  MLTMFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

A0A6J1JF03 uncharacterized protein LOC111486304

5.6e-82

94.44

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ
        MASISTFPIFHS+SRPATANPTPFP+FRSSISLHTS+NFA +AA+FRHSAVYGHRQ RGL+KR AVEGEASVPEQEVEGEE PAVTVSVSPSDMLTMFFQ
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQ

Query:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
Subjt:  AEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G14910.1 Heavy metal transport/detoxification superfamily protein

8.1e-33

52.17

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Query:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSA-ASFRHSAVYGH-RQSR-GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLT
        MASI+    FHS  R  + N +   +    + L  + NF   A  + R+ +  G  +Q+R GL+K  ++ EG   V   E + +ET  V+V VSPSDMLT
Subjt:  MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSA-ASFRHSAVYGH-RQSR-GLKKRRAV-EGEASVPEQEVEGEETPAVTVSVSPSDMLT

Query:  MFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV
        MFFQA+GTLNE+AIP+VT AL+  +G + LKVQV EG+A VEL KQ T+Q+TGVAS+L+ETIQ AGFKLQTLNLSFED++EV V
Subjt:  MFFQAEGTLNESAIPSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

Sequences

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CDS sequence

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ATGGCTTCAATCTCCACCTTCCCCATATTTCACTCCGTTTCTCGCCCTGCTACTGCAAATCCAACTCCATTTCCCATTTTCAGATCTTCAATCTCTCTTCACACCTCCTC
CAACTTCGCCGTCTCCGCCGCCTCCTTCAGGCATTCGGCGGTTTATGGCCACAGGCAGTCACGCGGCCTGAAAAAACGGAGGGCGGTCGAAGGGGAGGCTTCTGTTCCAG
AGCAAGAAGTTGAAGGAGAAGAGACGCCGGCGGTCACCGTGTCCGTCTCGCCGTCTGATATGCTCACCATGTTCTTTCAGGCAGAGGGGACTCTAAATGAATCAGCTATT
CCTTCTGTAACTGAGGCGTTGGAGCAAACTGAGGGTGCCACTGCATTAAAGGTTCAAGTTGTTGAGGGCATTGCATCTGTTGAGCTCACAAAGCAAATAACAATACAATC
GACCGGAGTAGCCTCGAGCTTGATCGAGACCATACAAAGCGCAGGTTTCAAGTTACAAACGCTAAATCTGAGTTTCGAGGACAATGAAGAAGTTTTTGTTTAG

mRNA sequence

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Protein sequence

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MASISTFPIFHSVSRPATANPTPFPIFRSSISLHTSSNFAVSAASFRHSAVYGHRQSRGLKKRRAVEGEASVPEQEVEGEETPAVTVSVSPSDMLTMFFQAEGTLNESAI
PSVTEALEQTEGATALKVQVVEGIASVELTKQITIQSTGVASSLIETIQSAGFKLQTLNLSFEDNEEVFV

CmoCh11G017090 (gene) of Cucurbita moschata (Rifu) v1 genome