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CmoCh11G017100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G017100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr11:12142633..12142938
RNA-Seq ExpressionCmoCh11G017100
SyntenyCmoCh11G017100
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588978.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5099.01Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

Query:  Q
        +
Subjt:  Q

XP_022928516.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.7e-50100Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

Query:  Q
        Q
Subjt:  Q

XP_022989149.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]1.0e-4793.4Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEA-----AAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        MAIRKPAIHTAALKQIVKRCSSLGRKQEA     A AGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEA-----AAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

Query:  LTAALQ
        LTAAL+
Subjt:  LTAALQ

XP_023529815.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]4.7e-4893.46Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAA------AGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFR
        MAIRKPAIHTAALKQIVKRCSSLGRKQEAAA      AGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFR
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAA------AGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFR

Query:  SLTAALQ
        SLTAAL+
Subjt:  SLTAALQ

XP_038887253.1 auxin-responsive protein SAUR50-like [Benincasa hispida]3.6e-4085.58Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA---GFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLT
        MAI KP    A LKQIVKRCSSLGRKQ+A AA    +D VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLT
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA---GFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLT

Query:  AALQ
        AAL+
Subjt:  AALQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein2.8e-3882.52Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA--GFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
        MAI KP     ALKQIVKRCSSLGRKQ+  A    +D VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTA
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAA--GFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA

Query:  ALQ
        AL+
Subjt:  ALQ

A0A6J1EKI0 auxin-responsive protein SAUR50-like8.3e-51100Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

Query:  Q
        Q
Subjt:  Q

A0A6J1GME7 auxin-responsive protein SAUR50-like6.6e-4085.44Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAA--AAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
        M I KP    AALK IVKRCSSLGRKQ+AA  A  +D VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEAA--AAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA

Query:  ALQ
        AL+
Subjt:  ALQ

A0A6J1I2G2 auxin-responsive protein SAUR50-like4.3e-3983.5Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQE--AAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
        M I KP    AALK IVKRCSSLGRKQ+  A A  +D VPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQE--AAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTA

Query:  ALQ
        AL+
Subjt:  ALQ

A0A6J1JNJ6 auxin-responsive protein SAUR50-like5.1e-4893.4Show/hide
Query:  MAIRKPAIHTAALKQIVKRCSSLGRKQEA-----AAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        MAIRKPAIHTAALKQIVKRCSSLGRKQEA     A AGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
Subjt:  MAIRKPAIHTAALKQIVKRCSSLGRKQEA-----AAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

Query:  LTAALQ
        LTAAL+
Subjt:  LTAALQ

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR509.2e-3162.73Show/hide
Query:  MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEV
        MAI K       TA LKQI+KRCSSLG+K      G+D      DVPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+
Subjt:  MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEV

Query:  VFRSLTAALQ
        VF++LT+ ++
Subjt:  VFRSLTAALQ

P0DKL1 Auxin-responsive protein SAUR501.9e-2357.89Show/hide
Query:  IRKPAIHTAAL--KQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        IRK    T AL  K+I+K+CSS G+  + +    +DVPKGHF VYVGE R+RY+VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+EV F S
Subjt:  IRKPAIHTAAL--KQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

P33081 Auxin-induced protein 15A1.4e-1555.84Show/hide
Query:  RKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL
        RK   AA    D PKG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  RKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL

P33082 Auxin-induced protein X151.9e-1557.58Show/hide
Query:  DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL
        D PKG+ AVYVGE   R+V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T  L
Subjt:  DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 108.1e-2759.81Show/hide
Query:  MAIRKPAIHT----AALKQIVKRCSSLGRKQEAAAAGFD-------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCE
        MAI++ +  T    A++KQIVKRCSSL + +      ++       DVPKGHF VYVG NRSRY+VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+
Subjt:  MAIRKPAIHT----AALKQIVKRCSSLGRKQEAAAAGFD-------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCE

Query:  EVVFRSL
        EV FRSL
Subjt:  EVVFRSL

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family3.3e-3165.14Show/hide
Query:  MAIRK--PAIHTAALKQIVKRCSSLGRKQEAAAAGFDD------VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVV
        MA++K      TA +KQI+KRCSSLG+KQ +   G D+      VPKGHF VYVGENR RYVVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEVV
Subjt:  MAIRK--PAIHTAALKQIVKRCSSLGRKQEAAAAGFDD------VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVV

Query:  FRSLTAALQ
        FRSLT+ L+
Subjt:  FRSLTAALQ

AT2G16580.1 SAUR-like auxin-responsive protein family4.7e-3063.27Show/hide
Query:  TAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALQ
        TA L+QI+KRCSSLG+K      G++      DVPKGHF VYVG NRSRY+VPIS LT+ DFQCLLR AEEEFGF H MGLTIPC+E+ F+ LT+ ++
Subjt:  TAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALQ

AT2G21220.1 SAUR-like auxin-responsive protein family4.2e-3165.05Show/hide
Query:  MAIRKPA--IHTAALKQIVKRCSSLGRKQEAAAAGFD-DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLT
        MA+++ +    TA LKQI+KRCSSL + Q     G   DVPKGHF VYVGE RSRY+VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT
Subjt:  MAIRKPA--IHTAALKQIVKRCSSLGRKQEAAAAGFD-DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLT

Query:  AAL
        + +
Subjt:  AAL

AT4G34760.1 SAUR-like auxin-responsive protein family6.6e-3262.73Show/hide
Query:  MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEV
        MAI K       TA LKQI+KRCSSLG+K      G+D      DVPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+
Subjt:  MAIRKPA---IHTAALKQIVKRCSSLGRKQEAAAAGFD------DVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEV

Query:  VFRSLTAALQ
        VF++LT+ ++
Subjt:  VFRSLTAALQ

AT4G36110.1 SAUR-like auxin-responsive protein family7.2e-3167Show/hide
Query:  MAIRK----PAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL
        MAI+K         A+LKQI+KRCSSLG+K +     F+DVPKGHF VYVG++RSRYVVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL
Subjt:  MAIRK----PAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCGAAAACCGGCGATTCACACGGCGGCGCTCAAGCAGATTGTGAAGCGCTGCTCCAGCCTAGGGCGGAAGCAAGAGGCCGCCGCGGCTGGATTTGACGATGT
TCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTTGCCGAGG
AGGAATTCGGTTTCCACCACCACATGGGCCTCACTATCCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTCGAAAACCGGCGATTCACACGGCGGCGCTCAAGCAGATTGTGAAGCGCTGCTCCAGCCTAGGGCGGAAGCAAGAGGCCGCCGCGGCTGGATTTGACGATGT
TCCCAAGGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCGATCTCGCTCTTGACTCACCCCGATTTTCAGTGCCTCCTCCGCCTTGCCGAGG
AGGAATTCGGTTTCCACCACCACATGGGCCTCACTATCCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCCAGTGA
Protein sequenceShow/hide protein sequence
MAIRKPAIHTAALKQIVKRCSSLGRKQEAAAAGFDDVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALQ