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CmoCh11G017120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G017120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-induced protein 15A-like
Genome locationCmo_Chr11:12150597..12150899
RNA-Seq ExpressionCmoCh11G017120
SyntenyCmoCh11G017120
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588983.1 hypothetical protein SDJN03_17548, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4392.71Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS
        MGFRLPRIVHARQSLQRSSSTGN ASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLS+AEEEFGY+HPMGGITIPCSE+ FL+LT+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS

XP_022135743.1 auxin-induced protein 15A-like [Momordica charantia]1.2e-4388Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHA+QSL+RSSSTGN ASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSED FL+LT+SLN S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

XP_022928518.1 auxin-induced protein 15A-like [Cucurbita moschata]6.7e-4795Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQ LLS+AEEEFGY+HPMGGITIPCSED FLNLTRSLN+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

XP_022989148.1 auxin-induced protein 15A-like [Cucurbita maxima]6.9e-4493.75Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS
        MGFRLPRIVHARQSLQRSSSTGN ASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPCSE+ FL+LT+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS

XP_022989150.1 auxin-induced protein 15A-like [Cucurbita maxima]1.4e-4797Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHAR+SLQRSSSTGN ASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQ EEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

TrEMBL top hitse value%identityAlignment
A0A6J1C5R3 auxin-induced protein 15A-like5.7e-4488Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHA+QSL+RSSSTGN ASPKAVDVPKGYFTVYVGEV+K+RFVIPLSYLN+PSFQDLL QAEEEFGY+HPMGGITIPCSED FL+LT+SLN S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

A0A6J1EPA0 auxin-induced protein 15A-like3.2e-4795Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQ LLS+AEEEFGY+HPMGGITIPCSED FLNLTRSLN+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

A0A6J1GJW5 auxin-induced protein 15A-like1.7e-4389Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIV  +QSLQRSSSTGN ASPKAVDVPKGYFTVYVGE +K+RFVIPLSYLNQPSFQDLLSQAEEEFGY HPMGGITIPCSED FL+LTRSLN+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

A0A6J1JLL2 auxin-induced protein 15A-like6.5e-4897Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
        MGFRLPRIVHAR+SLQRSSSTGN ASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQ EEEFGYEHPMGGITIPCSEDAFLNLTRSLNES
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES

A0A6J1JPE8 auxin-induced protein 15A-like3.4e-4493.75Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS
        MGFRLPRIVHARQSLQRSSSTGN ASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPCSE+ FL+LT+S
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG74.7e-2761.22Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN
        MGFRLP        ++++ S  N AS K +D PKGY  VYVGE   +RFVIP+S+LNQP FQDLLSQAEEEFGY+HPMGG+TIPCSED F ++T  L+
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN

P33079 Auxin-induced protein 10A52.1e-2761.62Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNE
        MGFR+  IV      +R+S    +A+ K VDVPKGY  VYVG+ + +RF IP+SYLN+PSFQ+LLSQAEEEFGY+HPMGG+TIPC E+ FLN+T  LNE
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNE

P33080 Auxin-induced protein X10A3.8e-2961.62Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNE
        MGFRLP        ++++S   N+AS K+V+VPKGY  VYVG+ + +RF+IP+SYLNQPSFQDLL+QAEEEFGY+HPMGG+TIPC ED FL +T  LN+
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNE

P33081 Auxin-induced protein 15A1.0e-2663.27Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN
        MGFRLP               G R + KA D PKGY  VYVGE + +RFVIP+SYLNQPSFQDLLSQAEEEFGY+HPMGG+TIPCSED F  +T  LN
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN

P33083 Auxin-induced protein 6B2.5e-2864.29Show/hide
Query:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN
        MGFRLP        ++++S + N+AS KAVDV KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEFGY HP GG+TIPCSED F ++T  LN
Subjt:  MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN

Arabidopsis top hitse value%identityAlignment
AT4G38840.1 SAUR-like auxin-responsive protein family9.7e-2853.54Show/hide
Query:  MGFRLPRIVH-ARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN
        M  R+PR++  ++Q L+++    + +S  ++DVPKGY  VYVGE   +RFV+P+SYL+QPSFQDLL +AEEEFG++HPMGG+TIPCSE+ F++L    N
Subjt:  MGFRLPRIVH-ARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLN

AT5G18010.1 SAUR-like auxin-responsive protein family3.8e-2454.44Show/hide
Query:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL
        ++ A++ L RS++ G+ A       PKG+  VYVGE +K+R+++PLSYL+QPSFQ LLS++EEEFG+ HPMGG+TIPC ED F+N+T  L
Subjt:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL

AT5G18020.1 SAUR-like auxin-responsive protein family1.1e-2356.1Show/hide
Query:  QSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLT
        +SL  +    +R++  A   PKG+  VYVGE +K+R+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC ED F+N+T
Subjt:  QSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLT

AT5G18050.1 SAUR-like auxin-responsive protein family1.1e-2353.33Show/hide
Query:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL
        ++ A++ L RS++  + A       PKG+  VYVGE +K+R+++PLSYLNQPSFQ LLS++E+EFG++HPMGG+TIPC ED F+N+T  L
Subjt:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2454.44Show/hide
Query:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL
        ++ A++ L RS+  G+ A       PKG+  VYVGE +K+R+++P+SYLNQPSFQ LLS++EEEFG++HPMGG+TIPC ED F+N+T  L
Subjt:  IVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTACCAAGGATTGTTCATGCCAGACAAAGCCTTCAACGTTCTTCATCAACAGGAAATCGAGCATCTCCCAAGGCTGTCGATGTTCCAAAGGGG
TACTTCACCGTTTATGTTGGCGAGGTAGAAAAGCAGCGTTTTGTGATCCCACTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAA
GAATTTGGATATGAACATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACGCTTTCCTCAATCTCACTCGGAGTTTGAATGAGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCGTTTACCAAGGATTGTTCATGCCAGACAAAGCCTTCAACGTTCTTCATCAACAGGAAATCGAGCATCTCCCAAGGCTGTCGATGTTCCAAAGGGG
TACTTCACCGTTTATGTTGGCGAGGTAGAAAAGCAGCGTTTTGTGATCCCACTATCTTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAA
GAATTTGGATATGAACATCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGACGCTTTCCTCAATCTCACTCGGAGTTTGAATGAGTCATGA
Protein sequenceShow/hide protein sequence
MGFRLPRIVHARQSLQRSSSTGNRASPKAVDVPKGYFTVYVGEVEKQRFVIPLSYLNQPSFQDLLSQAEEEFGYEHPMGGITIPCSEDAFLNLTRSLNES