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CmoCh11G017170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G017170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationCmo_Chr11:12172279..12172581
RNA-Seq ExpressionCmoCh11G017170
SyntenyCmoCh11G017170
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588987.1 Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5099Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MGVHLTGIANAKQKLQRTFTAKQG+GSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

XP_022135840.1 auxin-induced protein 15A-like [Momordica charantia]4.3e-4690Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT +AK G+GSAVTNVPKGHFAVYVGE  KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTSALNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

XP_022952478.1 auxin-induced protein 15A-like [Cucurbita moschata]2.8e-4588Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT + K G+GSAVTNVPKGHFAVYVGE +KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTS+LNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

XP_023529826.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]8.5e-5097Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MGVHLTGIANAKQKLQRTFTAKQG+GS VTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYF+TLTSALNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

XP_023553727.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]2.8e-4588Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT + K G+GSAVTNVPKGHFAVYVGE +KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTS+LNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

TrEMBL top hitse value%identityAlignment
A0A0A0K174 Uncharacterized protein3.0e-4588.24Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVT--NVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        MG+HLTGIANAKQKLQRTF+ K G+GSAVT  NVPKGHFAVYVGE QKKRFV+PI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYF++LTSALN
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVT--NVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

Query:  CS
        CS
Subjt:  CS

A0A5D3CL70 Auxin-induced protein 15A1.2e-4488.24Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVT--NVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        MG+HLTGIANAKQKLQRTF+ K G+GSAVT  NVPKGHFAVYVGE QKKRFVIPI YLNHPLFKDLLNLAEEEFGFDHP GGLTIPCTEDYF++LTSALN
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVT--NVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

Query:  CS
        CS
Subjt:  CS

A0A6J1C266 auxin-induced protein 15A-like2.1e-4690Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT +AK G+GSAVTNVPKGHFAVYVGE  KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTSALNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

A0A6J1GKP6 auxin-induced protein 15A-like1.4e-4588Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT + K G+GSAVTNVPKGHFAVYVGE +KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTS+LNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

A0A6J1I2U1 auxin-induced protein 15A-like1.4e-4588Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        MG+HLTGIANAKQKLQRT + K G+GSAVTNVPKGHFAVYVGE +KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYF++LTS+LNCS
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG73.7e-2457.14Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        MG  L GI       ++T +A+    S V + PKG+ AVYVGE   KRFVIP+S+LN PLF+DLL+ AEEEFG+DHPMGGLTIPC+ED F  +TS L+
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

P33080 Auxin-induced protein X10A1.4e-2357.14Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        MG  L GI       ++T  A     S    VPKG+  VYVG+ + +RF+IP+SYLN P F+DLLN AEEEFG+DHPMGGLTIPC ED FLT+TS LN
Subjt:  MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

P33081 Auxin-induced protein 15A2.0e-2268.06Show/hide
Query:  SAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        S   + PKG+ AVYVGE + KRFVIP+SYLN P F+DLL+ AEEEFG+DHPMGGLTIPC+ED F  +TS LN
Subjt:  SAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

Q9FJF6 Auxin-responsive protein SAUR232.0e-2265.28Show/hide
Query:  SAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        +AV+  PKG  AVYVGE QKKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED F+ +TS L+
Subjt:  SAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN

Q9FK62 Auxin-responsive protein SAUR242.7e-2258.89Show/hide
Query:  IANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSAL
        +  AK+ L R+     G GSA    PKG  AVYVGE QKKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED F+ +TS L
Subjt:  IANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSAL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.7e-2470Show/hide
Query:  VPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS
        +PKGH AVYVGE MQK+RFV+P++YL+HP F+ LL  AEEEFGFDHPMGGLTIPCTE  F+ L S L+ S
Subjt:  VPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS

AT4G34770.1 SAUR-like auxin-responsive protein family4.1e-3468.27Show/hide
Query:  MGVHLTGIANAKQKLQRTFTAKQG---LGSAVTNVPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSA
        MG+ L G++ AKQKLQR+ +A+       S   NVPKGH AVYVGE   +KRFVIPISYLNHPLF+ LLNLAEEEFGFDHPMGGLTIPCTEDYF  L S 
Subjt:  MGVHLTGIANAKQKLQRTFTAKQG---LGSAVTNVPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSA

Query:  LNCS
        L+ S
Subjt:  LNCS

AT4G34790.1 SAUR-like auxin-responsive protein family8.5e-2455.77Show/hide
Query:  MGVHLTGIANAKQKLQ-RTFTAKQGLGSAVTN------VPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLT
        MG+  + + NAKQ  + ++   K G  S  T       VPKGH AVYVGE M+KKRFV+PISYLNHPLF++ LN AEEE GF H MGGLTIPC E+ FL 
Subjt:  MGVHLTGIANAKQKLQ-RTFTAKQGLGSAVTN------VPKGHFAVYVGE-MQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLT

Query:  LTSA
        L ++
Subjt:  LTSA

AT4G34810.1 SAUR-like auxin-responsive protein family1.0e-2454.9Show/hide
Query:  MGVHLTGIANAKQ---KLQRTFTAKQGLGSAVTNVPKGHFAVYVG---EMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLT
        MG+    I+NA +   KL       +   S+  +VPKGH AVYVG   EM+KKRFV+PIS+LNHP FK+ L+ AEEEFGF+HPMGGLTIPC E+ FL L 
Subjt:  MGVHLTGIANAKQ---KLQRTFTAKQGLGSAVTNVPKGHFAVYVG---EMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLT

Query:  SA
        ++
Subjt:  SA

AT4G38840.1 SAUR-like auxin-responsive protein family5.9e-2554.95Show/hide
Query:  IANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN
        + ++KQ L++         S+  +VPKG+ AVYVGE   KRFV+P+SYL+ P F+DLL  AEEEFGFDHPMGGLTIPC+E+ F+ L S  N
Subjt:  IANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCCACTTGACAGGAATAGCAAATGCAAAGCAAAAGCTGCAGAGAACTTTCACGGCAAAACAGGGGCTTGGATCGGCGGTGACGAATGTTCCTAAAGGG
CATTTTGCAGTGTACGTAGGCGAAATGCAGAAGAAGAGATTTGTGATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTTGCGGAAGAG
GAATTTGGATTCGATCATCCAATGGGCGGCCTCACCATTCCTTGCACCGAAGATTACTTCCTCACCTTAACTTCTGCCCTAAATTGTTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTCCACTTGACAGGAATAGCAAATGCAAAGCAAAAGCTGCAGAGAACTTTCACGGCAAAACAGGGGCTTGGATCGGCGGTGACGAATGTTCCTAAAGGG
CATTTTGCAGTGTACGTAGGCGAAATGCAGAAGAAGAGATTTGTGATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTTGCGGAAGAG
GAATTTGGATTCGATCATCCAATGGGCGGCCTCACCATTCCTTGCACCGAAGATTACTTCCTCACCTTAACTTCTGCCCTAAATTGTTCGTAG
Protein sequenceShow/hide protein sequence
MGVHLTGIANAKQKLQRTFTAKQGLGSAVTNVPKGHFAVYVGEMQKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFLTLTSALNCS