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CmoCh11G017510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G017510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein translocase complex, SecE/Sec61-gamma subunit
Genome locationCmo_Chr11:12342453..12343677
RNA-Seq ExpressionCmoCh11G017510
SyntenyCmoCh11G017510
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0090351 - seedling development (biological process)
GO:0009528 - plastid inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR038379 - SecE superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589021.1 hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8499.4Show/hide
Query:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
        WALLNSCSRMVIASALGANHIGMASLPHSNR FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
Subjt:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET

Query:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

KAG7015285.1 hypothetical protein SDJN02_22920, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-8498.8Show/hide
Query:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
        WALLNSC+RMVIASALGANHIGMASLPHSNR FHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
Subjt:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET

Query:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_022928229.1 uncharacterized protein LOC111435124 [Cucurbita moschata]1.6e-85100Show/hide
Query:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
        WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
Subjt:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET

Query:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_022989177.1 uncharacterized protein LOC111486331 [Cucurbita maxima]4.4e-7594.9Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGM SLPHSNRPF V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGFNHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]1.5e-7898.73Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGMASLPHSNRPFHVRYNTAR NKANIFQGLPTRISRR GHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

TrEMBL top hitse value%identityAlignment
A0A0A0K1C8 Uncharacterized protein1.2e-5475.32Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL
        MVI S LG  HIG+  LP S  P+HV +YNT RLNK+++FQ L TRIS+R G HLYA RMGFNHAA  ++ QQ  FNDELPPEPFFL +IKET WGLRSL
Subjt:  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL

Query:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT
         IFL EQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSY+LT ILRRT
Subjt:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRT

A0A1S3BJG9 uncharacterized protein LOC1034902693.3e-5273.58Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL
        MVI S LG +HIG+  LP     +HV RYN  RLNK+++FQ L TRIS+R G HLYA RMGFNHAASG++ QQ  FNDE P EPFFL +IKET WGLRSL
Subjt:  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSL

Query:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
         IFL EQPSQLKYIEWPSFQSTLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Subjt:  FIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1C3M0 uncharacterized protein LOC1110080491.4e-5573.42Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHVRY-NTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLF
        M IASALGANHIGM   PH  +P H+ + NT R NK+N FQ LP  ISRR GHLYA RM FNHAASGR+N QL FN+E PPEPF L +I+E +WGLRSL 
Subjt:  MVIASALGANHIGMASLPHSNRPFHVRY-NTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLF

Query:  IFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        IFL EQPSQLKYIEWPSFQSTLKTAT  LVLVALLIVALSSVDS LSYILT +LRR++
Subjt:  IFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1EK97 uncharacterized protein LOC1114351247.8e-86100Show/hide
Query:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
        WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET
Subjt:  WALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKET

Query:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
Subjt:  VWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

A0A6J1JF36 uncharacterized protein LOC1114863312.1e-7594.9Show/hide
Query:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI
        MVIASALGANHIGM SLPHSNRPF V YNTAR NKAN+FQGLPTRIS RGGHLYADRMGFNHAASGRDN QLRFNDELPPEPFFLGIIKETVWGLRSLFI
Subjt:  MVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFI

Query:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS
        FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLS+ILTFILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38490.1 unknown protein2.5e-2065.33Show/hide
Query:  EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRR
        EP +L ++++ VW  RSL  F+AEQPSQLKYIEWP+F STLKTAT +L LVA+ IVALSSVD+ L YIL  ILR+
Subjt:  EPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGGGCGTTATTAAACTCTTGCTCTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGACCATTTCACGT
TCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATG
CTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTC
ATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGT
AGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGGGCGTTATTAAACTCTTGCTCTAGGATGGTGATCGCTTCTGCACTTGGGGCTAATCATATTGGAATGGCTTCTCTTCCTCATTCGAATCGACCATTTCACGT
TCGTTACAACACAGCCAGATTAAACAAGGCCAACATCTTTCAGGGACTGCCCACAAGGATTTCCAGAAGGGGTGGACATCTCTATGCTGATCGAATGGGCTTTAACCATG
CTGCATCTGGAAGAGATAATCAGCAACTGAGGTTTAATGATGAATTGCCTCCTGAACCCTTCTTCTTGGGTATAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTC
ATATTTCTGGCCGAGCAGCCCAGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAGCACGCTAAAGACTGCTACATTTGCTCTTGTTCTCGTTGCACTGTTGATTGT
AGCACTCTCATCAGTGGACTCGGTGCTCAGCTACATTTTAACTTTCATTCTCAGAAGGACCTCATAATGAATTCTGGTACTTTTCACTTCTTGTTACAAAATACTCTCAG
AAGTTAAACTTTTCTTTGCTGTTTTTAAATCGATGGTTGAGAGTGAGCGTTCTTGGTGTATATTAATGTTGTTGGAGATGTTTACACTAGCGTGTCTATGAAATCATGCC
GTAAGGAAAGTATAGAGAATATTGTCTTCCATGATTCGCGCATTTGGATACAATTACGACCGTCC
Protein sequenceShow/hide protein sequence
MYWALLNSCSRMVIASALGANHIGMASLPHSNRPFHVRYNTARLNKANIFQGLPTRISRRGGHLYADRMGFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLF
IFLAEQPSQLKYIEWPSFQSTLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS