; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G018000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTubulin-tyrosine ligase
Genome locationCmo_Chr11:12633687..12636029
RNA-Seq ExpressionCmoCh11G018000
SyntenyCmoCh11G018000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589072.1 hypothetical protein SDJN03_17637, partial [Cucurbita argyrosperma subsp. sororia]4.7e-10898.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQE SNDDNSDNTK EEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

KAG7022779.1 hypothetical protein SDJN02_16515, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-10898.99Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

XP_022928482.1 uncharacterized protein LOC111435277 [Cucurbita moschata]1.7e-110100Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

XP_022989470.1 uncharacterized protein LOC111486519 isoform X1 [Cucurbita maxima]1.0e-10292.12Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFHIRGLPLS    QNQDQNRNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK+E+IDHH+EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

XP_023529793.1 uncharacterized protein LOC111792510 [Cucurbita pepo subsp. pepo]1.4e-10797.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

TrEMBL top hitse value%identityAlignment
A0A0A0K4Z6 Uncharacterized protein3.6e-5857.84Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY YS A    KS+S +  PP PRLPYPR+DGLHIYTYRAFLDA+NF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKDEEIDHHREVIKNDIFEDIVNVVDLK
        YL+K++ISD+FHIRGLPL +N D+NR W RM  E  ++ Y EGTLD+TT+ LY F + +N +N         T DEE +    + ++   ED + +V LK
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDN------SDNTKDEEIDHHREVIKNDIFEDIVNVVDLK

Query:  DIIT
        D+IT
Subjt:  DIIT

A0A6J1C2J2 uncharacterized protein LOC1110076741.0e-6058.25Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMS-TTERPPIPRLPYPRVDGLHIYTYRAFLDAIN
        M++ L++S RKL +W+T+TFKPIMTH+ELEPIMATLGF+GLEP +N   ISWKSY YS A    KS++   E PP PRLP+PR+DGLHIYTYRAFLDA+N
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMS-TTERPPIPRLPYPRVDGLHIYTYRAFLDAIN

Query:  FYLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDN-------TKDEEIDHHREVIKNDIFEDIVNVVD
        FYL+K++ISD+FHIRGLPL +NQD+NR W RM  E  ++ Y EGTLD+TT++ Y F + +   NS+N        K E+ DH+R +I+++  EDI+ +V 
Subjt:  FYLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDN-------TKDEEIDHHREVIKNDIFEDIVNVVD

Query:  LKDIIT
        LKDIIT
Subjt:  LKDIIT

A0A6J1EK23 uncharacterized protein LOC1114352778.3e-111100Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ

A0A6J1JK57 uncharacterized protein LOC111486519 isoform X28.1e-5896.46Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHI
        YLQKYNISDVFHI
Subjt:  YLQKYNISDVFHI

A0A6J1JMG4 uncharacterized protein LOC111486519 isoform X14.9e-10392.12Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVIN DEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFHIRGLPLS    QNQDQNRNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK+E+IDHH+EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHIRGLPLS----QNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATACCTCAAGCAATCCAAGCGGAAACTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGG
CTTTATCGGCCTCGAACCGGTTATTAACCCCGACGAAATCTCCTGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGC
CGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTC
TTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGGACTTTAGATCG
AACAACAATTGATCTATATGAATTTCAAGAGAAAAGTAACGATGATAATAGTGATAACACCAAGGATGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTT
TTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAATACCTCAAGCAATCCAAGCGGAAACTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGG
CTTTATCGGCCTCGAACCGGTTATTAACCCCGACGAAATCTCCTGGAAATCATACGTATACTCCGGCGCTCATAGCCTGATCAAGTCAATGTCGACGACGGAGCGTCCGC
CGATACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTC
TTCCATATTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGGACTTTAGATCG
AACAACAATTGATCTATATGAATTTCAAGAGAAAAGTAACGATGATAATAGTGATAACACCAAGGATGAAGAGATTGACCACCATCGAGAGGTGATAAAGAATGATATTT
TTGAAGATATCGTCAATGTTGTTGATTTGAAAGATATTATAACGCAATAA
Protein sequenceShow/hide protein sequence
MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINPDEISWKSYVYSGAHSLIKSMSTTERPPIPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDV
FHIRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHHREVIKNDIFEDIVNVVDLKDIITQ