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CmoCh11G018010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:12637945..12642262
RNA-Seq ExpressionCmoCh11G018010
SyntenyCmoCh11G018010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589065.1 hypothetical protein SDJN03_17630, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2356.06Show/hide
Query:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA---------------------------------------EEYRRVIVSQGTLASK
        MNKSSPERA NNEFLGN SVADDSRSSVRVTERRWESMLPAARK                                         E + +I  +    S 
Subjt:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA---------------------------------------EEYRRVIVSQGTLASK

Query:  RFKRYRNYSILHDQYRLLKNYRSNSEIWISAY
        R   YRNYSILHDQYRLLKNYRSNSEIWISAY
Subjt:  RFKRYRNYSILHDQYRLLKNYRSNSEIWISAY

KAG6589074.1 hypothetical protein SDJN03_17639, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2355.3Show/hide
Query:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA---------------------------------------EEYRRVIVSQGTLASK
        MNKSSPERA NNEFLGNFSVADDS SSVRVTERRWESMLPAARK                                         E + +I  +    S 
Subjt:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA---------------------------------------EEYRRVIVSQGTLASK

Query:  RFKRYRNYSILHDQYRLLKNYRSNSEIWISAY
        R   +RNYSILHDQYRLLKNYRSNSEIWISAY
Subjt:  RFKRYRNYSILHDQYRLLKNYRSNSEIWISAY

KAG7022781.1 hypothetical protein SDJN02_16517, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-2355.88Show/hide
Query:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA-------EEYRRVIVS--QGTLASKRFKR--------------------------
        MNKSSPERA NNEFLGN SVADDSRSSVRVTERRWESMLPAARK         E R + +   Q   + KR K                           
Subjt:  MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKA-------EEYRRVIVS--QGTLASKRFKR--------------------------

Query:  --------YRNYSILHDQYRLLKNYRSNSEIWISAY
                YRNYSILHDQYRLLKNYRSNSEIWISAY
Subjt:  --------YRNYSILHDQYRLLKNYRSNSEIWISAY

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGAGTTCGCCGGAGAGAGCATCTAATAATGAGTTTCTTGGCAACTTCTCCGTCGCCGACGATTCTCGGTCCTCCGTACGAGTTACTGAGCGCCGGTGGGAAAG
CATGTTGCCTGCGGCTAGGAAGGCGGAGGAATATCGGAGAGTGATAGTGAGCCAAGGAACCTTAGCATCGAAGCGATTCAAGCGCTACCGGAATTATTCCATATTGCACG
ATCAGTATCGATTGTTGAAGAATTATCGCAGCAATAGCGAGATATGGATTTCTGCTTATGAAGATAGGCCATCATTGGGAGGACAGAAGTCGGTGGCGGTTAGGATGACG
GTCGGACTTCCTTCCAAGCACCACAAGATGTGGTCAACACATCTAAGCTCAAAGCATGCTCCACAGCCATTTCATTCAGAAGAGTACAAGGCCTTGAAGAAGAAGCCTGA
AAGGGCTCAAAATGAGCTCTTCGTTCACACTAGTGGCGCGTTTAACGAGGCAGAGGAAAAGACACGCACATTGTTCATCAGCCTCCTACTGTTCTTTATCTTCTTGTCCC
CGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGAGTTCGCCGGAGAGAGCATCTAATAATGAGTTTCTTGGCAACTTCTCCGTCGCCGACGATTCTCGGTCCTCCGTACGAGTTACTGAGCGCCGGTGGGAAAG
CATGTTGCCTGCGGCTAGGAAGGCGGAGGAATATCGGAGAGTGATAGTGAGCCAAGGAACCTTAGCATCGAAGCGATTCAAGCGCTACCGGAATTATTCCATATTGCACG
ATCAGTATCGATTGTTGAAGAATTATCGCAGCAATAGCGAGATATGGATTTCTGCTTATGAAGATAGGCCATCATTGGGAGGACAGAAGTCGGTGGCGGTTAGGATGACG
GTCGGACTTCCTTCCAAGCACCACAAGATGTGGTCAACACATCTAAGCTCAAAGCATGCTCCACAGCCATTTCATTCAGAAGAGTACAAGGCCTTGAAGAAGAAGCCTGA
AAGGGCTCAAAATGAGCTCTTCGTTCACACTAGTGGCGCGTTTAACGAGGCAGAGGAAAAGACACGCACATTGTTCATCAGCCTCCTACTGTTCTTTATCTTCTTGTCCC
CGCCGTGAGTGGTGGCTCAAAGAAGCAAACTTGGAGGAGCCTC
Protein sequenceShow/hide protein sequence
MNKSSPERASNNEFLGNFSVADDSRSSVRVTERRWESMLPAARKAEEYRRVIVSQGTLASKRFKRYRNYSILHDQYRLLKNYRSNSEIWISAYEDRPSLGGQKSVAVRMT
VGLPSKHHKMWSTHLSSKHAPQPFHSEEYKALKKKPERAQNELFVHTSGAFNEAEEKTRTLFISLLLFFIFLSPP