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CmoCh11G018300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationCmo_Chr11:12793528..12794007
RNA-Seq ExpressionCmoCh11G018300
SyntenyCmoCh11G018300
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589100.1 hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]6.9e-7098.11Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        IQKDEESERSI+EDDDN  DDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

KAG7022808.1 hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-6896.86Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHS GDSRGAEALEASMADGSSKIESKVEDREERGNGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        IQKDEESERSI+ED   DDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

XP_022928452.1 uncharacterized protein LOC111435260 [Cucurbita moschata]1.1e-72100Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

XP_022969273.1 sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]6.0e-4268.64Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AEAL A+M D ++ IE KVED EER NG
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNG

Query:  LI-QKDEESERSIVEDDDNDDDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
         I ++++ESER + E++   + ++E        EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  LI-QKDEESERSIVEDDDNDDDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]7.6e-6996.86Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEA+MADGSSKIESKVEDREERGNGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        IQKDEESERSIVED   DDDDD+EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein2.6e-3865.06Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLI-SCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNG
        MKL+ISASLLSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI + S +R SG ++ GA    A+MADG+ KIESKVE  EERGNG
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLI-SCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNG

Query:  LIQKDEESERSIVEDDDND------DDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        L+  +++ E  I +++  +      ++++EEE+     EELNKKCEEFIRKMKAGIK ESQQL +L
Subjt:  LIQKDEESERSIVEDDDND------DDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

A0A1S3CG16 gem-associated protein 2-like5.7e-3058.02Show/hide
Query:  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESK--VEDREERGNGLIQKDEESERS
        MVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI   G+  +   SR       +MADG+ KIESK  VE  EER NGL+  +E+ E  
Subjt:  MVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESK--VEDREERGNGLIQKDEESERS

Query:  IV-------------EDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        I              E+++ +++++EEE      EELNKKCEEFIRKMKAGIK ESQQL +L
Subjt:  IV-------------EDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

A0A6J1C4P4 ATP-dependent RNA helicase MAK51.2e-3865.41Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MK+LISASLLSAMV YSSLLPFLHS NLYISAT HKNY+FLLCNGLLVFIVRNSGLI  SG+   GG                 K+ESKVED EER NGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEV-GALSKEELNKKCEEFIRKMKAGIKLESQQLLV
        + + EESE+ I ED++++++++EEE  G LS EELN+KCEEFIRKMKA IK E QQ+LV
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEV-GALSKEELNKKCEEFIRKMKAGIKLESQQLLV

A0A6J1EJY9 uncharacterized protein LOC1114352605.5e-73100Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
        MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGL

Query:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
Subjt:  IQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like2.9e-4268.64Show/hide
Query:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AEAL A+M D ++ IE KVED EER NG
Subjt:  MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNG

Query:  LI-QKDEESERSIVEDDDNDDDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
         I ++++ESER + E++   + ++E        EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  LI-QKDEESERSIVEDDDNDDDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04495.1 unknown protein2.0e-0634.03Show/hide
Query:  KLLISASLLSAMVFYSSLLPF----LHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADG---------------
        K++  AS+ S ++ YSSL+      LH  ++Y S    K YMFLLCNG++ FI     L S  G+  S    +    +E +   G               
Subjt:  KLLISASLLSAMVFYSSLLPF----LHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADG---------------

Query:  -SSKIESKVEDREERGNG--LIQKDEESERSIVEDDDN------------DDDDDEEEV--GALSKEELNKKCEEFIRKMKAGIKLESQQL
           K  SK E+ EE G    L +  EE E S+V + D             DD  D+EE+    LS E+LNKKCE+FIRKMKA I+   + +
Subjt:  -SSKIESKVEDREERGNG--LIQKDEESERSIVEDDDN------------DDDDDEEEV--GALSKEELNKKCEEFIRKMKAGIKLESQQL

AT2G04515.1 unknown protein1.8e-0735.2Show/hide
Query:  KLLISASLLSAMVFYSSLLPF----LHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKI-ESKVE-----
        K++  AS+ S ++ YSSL+      LH   +Y S    K YMFLLCNG++ FI     L S  G+  S    +    +E +   G   + E+KV      
Subjt:  KLLISASLLSAMVFYSSLLPF----LHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKI-ESKVE-----

Query:  ------DREERGNGLIQKDEESERSIV--EDD------------DNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIK
               +EE G  ++ ++EE E ++V  ED+            D+ DDDD      LS E+LNKKCE+FIRKMKA I+
Subjt:  ------DREERGNGLIQKDEESERSIV--EDD------------DNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIK

AT3G13130.1 unknown protein3.7e-0529.07Show/hide
Query:  HSFNLY------ISATAHKNYMFLLCNGLLVFIVRNSGLISCS----------------GDRHS-------------GGDSRGAEALEASMADGSSKIES
        H F LY      ++    KNYMFLLCNGL+V + + SGL++ S                GD  S             G  +    A E ++ + +   E+
Subjt:  HSFNLY------ISATAHKNYMFLLCNGLLVFIVRNSGLISCS----------------GDRHS-------------GGDSRGAEALEASMADGSSKIES

Query:  K-VEDREERGNGLIQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL
        +  E+ ++  N L   D E E  +     N++++    V   ++EE+NKK +EFIRKMK  +++E+++ L+L
Subjt:  K-VEDREERGNGLIQKDEESERSIVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTTGATCTCAGCTTCTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCACTCTTTCAACCTTTATATCTCTGCAACAGCCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATTGTTCGAAACTCCGGTCTTATCAGCTGCTCCGGCGACCGACACAGTGGCGGAGATAGCAGGGGAGCTGAAG
CTCTAGAGGCTTCCATGGCGGATGGCAGCAGCAAAATTGAGAGCAAAGTTGAAGATAGAGAAGAGAGGGGAAATGGGTTGATTCAAAAAGATGAAGAAAGTGAAAGATCG
ATCGTGGAGGATGACGATAACGACGACGACGACGACGAAGAAGAAGTTGGGGCATTGAGCAAAGAGGAATTGAATAAGAAATGCGAAGAATTCATTAGAAAAATGAAGGC
TGGAATCAAGCTTGAATCACAGCAATTGCTTGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTTTGATCTCAGCTTCTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCACTCTTTCAACCTTTATATCTCTGCAACAGCCCACAAGAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATTGTTCGAAACTCCGGTCTTATCAGCTGCTCCGGCGACCGACACAGTGGCGGAGATAGCAGGGGAGCTGAAG
CTCTAGAGGCTTCCATGGCGGATGGCAGCAGCAAAATTGAGAGCAAAGTTGAAGATAGAGAAGAGAGGGGAAATGGGTTGATTCAAAAAGATGAAGAAAGTGAAAGATCG
ATCGTGGAGGATGACGATAACGACGACGACGACGACGAAGAAGAAGTTGGGGCATTGAGCAAAGAGGAATTGAATAAGAAATGCGAAGAATTCATTAGAAAAATGAAGGC
TGGAATCAAGCTTGAATCACAGCAATTGCTTGTTTTGTAA
Protein sequenceShow/hide protein sequence
MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERS
IVEDDDNDDDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL