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CmoCh11G018330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:12809602..12812155
RNA-Seq ExpressionCmoCh11G018330
SyntenyCmoCh11G018330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]3.0e-2162.02Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHL--ESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPG-
        MGRH SE TM+GTSIALLQERFRQLQK+KQ+RE+KELL+LL +SNRV+ +SIMHL  E N S   R L+ +SLSLGLN   + GKQV  DIHEAR +P  
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHL--ESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPG-

Query:  ------NSVMGSGLRSCLDNQDVDTTLHL
              NS M S LRS   + +VDTTLHL
Subjt:  ------NSVMGSGLRSCLDNQDVDTTLHL

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]3.8e-2473.74Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPGNS
        MGRH+SE TM+GTSIALLQERFRQLQK+KQRRE+KELL+LL +SNRV+ +SIMHLE N SS SRDL+ +SLSLGLN  ++AGKQV  DIHEAR MPG++
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPGNS

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2057.02Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARLMPGNSVMGS
        M RHSSE  ++GTSIALLQERFRQLQK+K RREKKE++ LLSDSN ++T             SRDL  +SLSLGLN  +AGKQVD HE RLMPG++ +  
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARLMPGNSVMGS

Query:  GLRSCLDNQ----DVDTTLHL
              D      DVDTTLHL
Subjt:  GLRSCLDNQ----DVDTTLHL

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3780.51Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARLMPG------
        MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEAR +        
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARLMPG------

Query:  -----NSVMGSGLRSCLD
             +  + SGL  C D
Subjt:  -----NSVMGSGLRSCLD

KAG7022811.1 hypothetical protein SDJN02_16547, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-1191.89Show/hide
Query:  MVSSFPCNNGHWSNGNCRVYLRAFSFLNGFINVNNKP
        MVSSFPCNNGHWSNGNCRVYLRAFSFLNGFINV+  P
Subjt:  MVSSFPCNNGHWSNGNCRVYLRAFSFLNGFINVNNKP

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein2.1e-2868.5Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMP----
        MGRH+SE TM+GTSIALLQERFRQLQK+KQRRE+KELL+LL +SNRV+ +SIMHLE N SS SRDL+ +SLSLGLN  ++AGKQV  DIHEAR MP    
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMP----

Query:  ---GNSVMGSGLRSCLDNQDVDTTLHL
           GNS M S  RS  D+ +VDTTLHL
Subjt:  ---GNSVMGSGLRSCLDNQDVDTTLHL

A0A2P5E581 Uncharacterized protein3.0e-1143.41Show/hide
Query:  MGRHSSE-TTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTS-----SIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEAR----
        MGR S + TT + +SIALLQERFRQLQK K+RRE+KEL+ +LS+S +V+       S +  +SN +   R  + D  SL L      KQ D++  R    
Subjt:  MGRHSSE-TTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTS-----SIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEAR----

Query:  --LMPGNSVMGSGLRSCLDNQDVDTTLHL
          L P  S   S  +S  DN D+DT+LHL
Subjt:  --LMPGNSVMGSGLRSCLDNQDVDTTLHL

A0A5D3E685 Uncharacterized protein1.4e-2162.02Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHL--ESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPG-
        MGRH SE TM+GTSIALLQERFRQLQK+KQ+RE+KELL+LL +SNRV+ +SIMHL  E N S   R L+ +SLSLGLN   + GKQV  DIHEAR +P  
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHL--ESNRSSNSRDLNPDSLSLGLN-SSSAGKQV--DIHEARLMPG-

Query:  ------NSVMGSGLRSCLDNQDVDTTLHL
              NS M S LRS   + +VDTTLHL
Subjt:  ------NSVMGSGLRSCLDNQDVDTTLHL

A0A6P4MSJ5 uncharacterized protein LOC1084694203.9e-1146.34Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIH------EARLMPG
        MGR S + TM  +SIALLQERFRQLQK +Q+RE KELL L S+ +R    S    E +   + R    DSL+LGLNS S  KQ D           L   
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIH------EARLMPG

Query:  NSVMGSGLRSCLDNQDVDTTLHL
        +    SG    L+N DVDT+LHL
Subjt:  NSVMGSGLRSCLDNQDVDTTLHL

A0A6P6A4C9 uncharacterized protein LOC1113062141.4e-1147.29Show/hide
Query:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNS-------RDLNPDSLSLGLNSSSAGKQVD-----IHE
        MGR   + TM+ +SIALLQERFRQLQK +++REKKELL L S+S R   S  M  E NR S         R  + +S SLGLNS S  +Q D     I  
Subjt:  MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNS-------RDLNPDSLSLGLNSSSAGKQVD-----IHE

Query:  ARLMPGNSVMGSGLRSCLDNQDVDTTLHL
        A  +  NS   S     L+N DVDT+LHL
Subjt:  ARLMPGNSVMGSGLRSCLDNQDVDTTLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCAAGCTTCCCATGTAATAATGGACACTGGTCTAATGGGAATTGCAGAGTTTACCTGAGGGCATTTTCGTTCCTGAATGGCTTTATTAACGTGAACAACAAACC
ATTGATGCGCTTTAGAAGGAGACGATACTGCTTTCTAAAGGTAGAGTTCGTTTCATCCAGTTGCCGTCCACGACTCATGGGTAGGCACAGTAGTGAAACCACCATGATTG
GTACCTCCATAGCTCTCTTACAGGAAAGGTTCAGGCAGTTGCAGAAAGACAAACAAAGGAGAGAGAAGAAGGAGCTTCTTAGCCTGTTGTCTGATTCGAATAGAGTCAAT
ACCTCCTCGATAATGCATTTAGAATCCAATAGGTCGTCGAACTCGAGAGATTTGAACCCTGATTCCCTCTCCCTTGGCTTGAACTCGTCGAGTGCAGGTAAGCAAGTCGA
TATCCATGAAGCTAGGTTGATGCCTGGAAATTCAGTCATGGGTAGTGGCTTAAGAAGTTGTTTAGATAATCAAGATGTGGATACCACTCTTCATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTCAAGCTTCCCATGTAATAATGGACACTGGTCTAATGGGAATTGCAGAGTTTACCTGAGGGCATTTTCGTTCCTGAATGGCTTTATTAACGTGAACAACAAACC
ATTGATGCGCTTTAGAAGGAGACGATACTGCTTTCTAAAGGTAGAGTTCGTTTCATCCAGTTGCCGTCCACGACTCATGGGTAGGCACAGTAGTGAAACCACCATGATTG
GTACCTCCATAGCTCTCTTACAGGAAAGGTTCAGGCAGTTGCAGAAAGACAAACAAAGGAGAGAGAAGAAGGAGCTTCTTAGCCTGTTGTCTGATTCGAATAGAGTCAAT
ACCTCCTCGATAATGCATTTAGAATCCAATAGGTCGTCGAACTCGAGAGATTTGAACCCTGATTCCCTCTCCCTTGGCTTGAACTCGTCGAGTGCAGGTAAGCAAGTCGA
TATCCATGAAGCTAGGTTGATGCCTGGAAATTCAGTCATGGGTAGTGGCTTAAGAAGTTGTTTAGATAATCAAGATGTGGATACCACTCTTCATCTATGA
Protein sequenceShow/hide protein sequence
MVSSFPCNNGHWSNGNCRVYLRAFSFLNGFINVNNKPLMRFRRRRYCFLKVEFVSSSCRPRLMGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVN
TSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARLMPGNSVMGSGLRSCLDNQDVDTTLHL