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CmoCh11G018550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein DC7.1-like
Genome locationCmo_Chr11:12935046..12935758
RNA-Seq ExpressionCmoCh11G018550
SyntenyCmoCh11G018550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589124.1 hypothetical protein SDJN03_17689, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4197.87Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_022136255.1 glycine-rich protein DC7.1-like [Momordica charantia]2.0e-1361.22Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN
        M+SK  I LGLLF +V+LLSSEE +ATAR LKSVEE + ETN +GIEDDKR    GHHGH HHH R  H H HHC     ADED     E+ Q KPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN

XP_022930749.1 glycine-rich protein DC7.1-like [Cucurbita moschata]3.6e-42100Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_022989495.1 glycine-rich protein DC7.1-like [Cucurbita maxima]1.6e-3792.55Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEA+ATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGH+HHHRHHHR   HCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

XP_023529828.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]5.2e-4196.81Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEASATARGLKSVEE VMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

TrEMBL top hitse value%identityAlignment
A0A6J1C3E0 glycine-rich protein DC7.1-like9.9e-1461.22Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN
        M+SK  I LGLLF +V+LLSSEE +ATAR LKSVEE + ETN +GIEDDKR    GHHGH HHH R  H H HHC     ADED     E+ Q KPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHH-RHHHRHRHHCRHGCSADEDV---NEDPQAKPNN

A0A6J1C3T3 glycine-rich protein 3 short isoform-like5.4e-0441.22Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDK-------------------RRFGGGHHGHRHHH------RHHHRHRHHCR
        MNSKAFI+LGLLF +V+LLSS+    TAR LK   E VMET  DG+ED K                    R+GGG+ GH  H+      R  +    HC 
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDK-------------------RRFGGGHHGHRHHH------RHHHRHRHHCR

Query:  HGCS------------ADEDVNEDPQAKPNN
        HGC             A E V+ +PQAKP+N
Subjt:  HGCS------------ADEDVNEDPQAKPNN

A0A6J1ESD5 glycine-rich protein DC7.1-like1.7e-42100Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

A0A6J1JMI7 glycine-rich protein DC7.1-like7.5e-3892.55Show/hide
Query:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN
        MNSKAFIILGLLF +VILLSSEEA+ATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGH+HHHRHHHR   HCRHGCSADEDVNEDPQAKPNN
Subjt:  MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTAAAGCTTTCATCATCCTCGGCCTCCTTTTCACCATTGTCATCCTCCTCTCCTCGGAGGAGGCTTCAGCTACCGCAAGAGGTCTAAAGAGCGTTGAAGAAGC
CGTGATGGAGACTAACGGAGATGGAATCGAGGATGACAAGCGTCGTTTCGGGGGAGGCCACCATGGGCACAGGCATCACCACAGGCACCACCACAGGCACCGCCACCATT
GTCGTCACGGTTGCTCGGCTGATGAGGATGTTAATGAAGATCCACAAGCCAAGCCTAACAATTGA
mRNA sequenceShow/hide mRNA sequence
ACCCATCTTCCTATCTTCTCCTATAAATACATTCAAAATTCTACTAATCTTCTCATCCCTTCTACAACTTTCTCCGTATTTCTTTAGCTCGGGCGTTTAAAATGAATTCT
AAAGCTTTCATCATCCTCGGCCTCCTTTTCACCATTGTCATCCTCCTCTCCTCGGAGGAGGCTTCAGCTACCGCAAGAGGTCTAAAGAGCGTTGAAGAAGCCGTGATGGA
GACTAACGGAGATGGAATCGAGGATGACAAGCGTCGTTTCGGGGGAGGCCACCATGGGCACAGGCATCACCACAGGCACCACCACAGGCACCGCCACCATTGTCGTCACG
GTTGCTCGGCTGATGAGGATGTTAATGAAGATCCACAAGCCAAGCCTAACAATTGAAAATGGGGTTGGTTCAAGTCAATGTTATAGTGATTGTGTAAGTTATGAATAAAT
GCATTATTATGCTTGAGTTGTGAAGGCTTGTTCGTGTCCATGTAAGCTCTCTACTAAAGAGATTAATTGTGTGTATTTTGAGCTTTATTGTATAAGTTAATTAAATAATC
ATGTGAAATATTGTTCCTATAATTTCTTTCTTCTAATTCTAACACTTTTTTATATTCTTTT
Protein sequenceShow/hide protein sequence
MNSKAFIILGLLFTIVILLSSEEASATARGLKSVEEAVMETNGDGIEDDKRRFGGGHHGHRHHHRHHHRHRHHCRHGCSADEDVNEDPQAKPNN