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CmoCh11G018570 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018570
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncold and drought-regulated protein CORA-like
Genome locationCmo_Chr11:12942005..12942348
RNA-Seq ExpressionCmoCh11G018570
SyntenyCmoCh11G018570
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059138.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa]5.1e-1469.15Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVF GLL AFV L+SSE++ARDLA+T S+TDNE  +E N +EDAK    YDRGYGG   GGY  GGY GRGGYG GGYGG  G+GGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

XP_008455506.1 PREDICTED: cold and drought-regulated protein CORA-like [Cucumis melo]5.1e-1469.15Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVF GLL AFV L+SSE++ARDLA+T S+TDNE  +E N +EDAK    YDRGYGG   GGY  GGY GRGGYG GGYGG  G+GGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

XP_022930693.1 cold and drought-regulated protein CORA-like [Cucurbita moschata]1.2e-34100Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

XP_022930746.1 cold and drought-regulated protein CORA-like [Cucurbita moschata]1.1e-1673.81Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGH
        MS KAFVF  L FAFV LISSE+SARDLAKTSE DN+  +EIN I+DAKYDRGYG HDHGGY GGGYG  G  G  GY GHNGH
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGH

XP_038886927.1 cold and drought-regulated protein CORA-like isoform X2 [Benincasa hispida]1.6e-1266.3Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGG
        MSSKAFVF GLL AFV LISSE++ARDLA+T S+ DNEV +E N +EDAK    YDRGYGG   GGY      G GGYGHGGYGG  G+GGG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGG

TrEMBL top hitse value%identityAlignment
A0A1S3C180 cold and drought-regulated protein CORA-like2.5e-1469.15Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVF GLL AFV L+SSE++ARDLA+T S+TDNE  +E N +EDAK    YDRGYGG   GGY  GGY GRGGYG GGYGG  G+GGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

A0A5D3DE59 Cold and drought-regulated protein CORA-like2.5e-1469.15Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVF GLL AFV L+SSE++ARDLA+T S+TDNE  +E N +EDAK    YDRGYGG   GGY  GGY GRGGYG GGYGG  G+GGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAK----YDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

A0A6J1ERS8 cold and drought-regulated protein CORA-like5.3e-1773.81Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGH
        MS KAFVF  L FAFV LISSE+SARDLAKTSE DN+  +EIN I+DAKYDRGYG HDHGGY GGGYG  G  G  GY GHNGH
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGH

A0A6J1EW28 cold and drought-regulated protein CORA-like5.6e-35100Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG

A0P8W6 Cell wall glycine-rich protein3.0e-1265.93Show/hide
Query:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGY-GGRGGYGHGGYGGHNGHGGGRG
        MSSKAFVF GLL AFV L+SSE++ARDLA+T S+TDNE  +E N +EDAKY RG     +GG H  GY GGRGGYG G YGG  G+GGGRG
Subjt:  MSSKAFVFFGLLFAFVFLISSELSARDLAKT-SETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGY-GGRGGYGHGGYGGHNGHGGGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAGGCTTTTGTTTTCTTTGGTCTTCTTTTCGCCTTTGTTTTCCTCATCTCTTCCGAGTTGTCCGCTAGAGACCTGGCGAAGACCTCGGAAACGGACAATGA
GGTGAGGTTGGAGATCAATAGCATAGAGGATGCCAAATATGATAGAGGTTATGGAGGCCATGATCATGGTGGTTACCACGGTGGTGGTTACGGCGGCCGTGGAGGTTATG
GCCATGGTGGCTACGGCGGCCACAATGGTCACGGTGGCGGCCGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAGGCTTTTGTTTTCTTTGGTCTTCTTTTCGCCTTTGTTTTCCTCATCTCTTCCGAGTTGTCCGCTAGAGACCTGGCGAAGACCTCGGAAACGGACAATGA
GGTGAGGTTGGAGATCAATAGCATAGAGGATGCCAAATATGATAGAGGTTATGGAGGCCATGATCATGGTGGTTACCACGGTGGTGGTTACGGCGGCCGTGGAGGTTATG
GCCATGGTGGCTACGGCGGCCACAATGGTCACGGTGGCGGCCGTGGATGA
Protein sequenceShow/hide protein sequence
MSSKAFVFFGLLFAFVFLISSELSARDLAKTSETDNEVRLEINSIEDAKYDRGYGGHDHGGYHGGGYGGRGGYGHGGYGGHNGHGGGRG