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CmoCh11G018580 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018580
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein-like
Genome locationCmo_Chr11:12943809..12944645
RNA-Seq ExpressionCmoCh11G018580
SyntenyCmoCh11G018580
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589125.1 Glycine-rich protein, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4797Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAAS+LAHTS K ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
KAG7022827.1 Glycine-rich protein [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4797Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDL HTS K ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
XP_022930747.1 glycine-rich protein DC7.1-like [Cucurbita moschata]4.2e-49100Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
XP_022989494.1 glycine-rich protein DC7.1-like [Cucurbita maxima]1.2e-4899Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLAHTS KNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
XP_023529825.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]6.1e-4898Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLAHTS K ENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
TrEMBL top hitse value%identityAlignment
A0A5D3DE59 Cold and drought-regulated protein CORA-like1.4e-2665.25Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKY-GGYDRGYRRGRYDHGGH--DGHGHGGY---------------RCRHGW
        MSSKAFVFLGLL AFVLL+SS VAA DLA TS+K +N AT+ETNGVEDAKY GGYDRGY  G Y  GG+   G+G GGY                CR+G 
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKY-GGYDRGYRRGRYDHGGH--DGHGHGGY---------------RCRHGW

Query:  CRYRCCSYAGEVVEGAKP
        C YRCCSYAGEVVEGAKP
Subjt:  CRYRCCSYAGEVVEGAKP
A0A6J1ERH4 glycine-rich protein DC7.1-like2.0e-49100Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
A0A6J1GKL6 glycine-rich protein-like isoform X21.1e-2670.37Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGY-----RRGRYDHGGHDGHGHG---GYRCRHGWCRYRCCSYAG
        MSSKAF+FLGLLFA VLLISS VAA DLA TS K EN AT ETNGVEDAKYGGYD GY       GR  +GG  G+G G   G  CR+G C YRCCSYAG
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGY-----RRGRYDHGGHDGHGHG---GYRCRHGWCRYRCCSYAG

Query:  EVVEGAKP
        EVVEGAKP
Subjt:  EVVEGAKP
A0A6J1GM55 cold and drought-regulated protein CORA-like isoform X12.4e-2665.55Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGY-RRGRYDHGGHDGH----------GHGGY--------RCRHG
        MSSKAF+FLGLLFA VLLISS VAA DLA TS K EN AT ETNGVEDAKYGGYD GY  RG Y  GG+ G           G GGY         CR+G
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGY-RRGRYDHGGHDGH----------GHGGY--------RCRHG

Query:  WCRYRCCSYAGEVVEGAKP
         C YRCCSYAGEVVEGAKP
Subjt:  WCRYRCCSYAGEVVEGAKP
A0A6J1JPH5 glycine-rich protein DC7.1-like5.9e-4999Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
        MSSKAFVFLGLLFAFVLLISSNVAASDLAHTS KNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP
SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein5.8e-0947.17Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATME-TNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYR---CRHGWCR------YRCCSY
        M SKAF+FLGL  AF  LISS V A +LA TS    N   ++  NGV+    GGY+     G Y  GG  G G GGY+   CR+G CR       RCCSY
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATME-TNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYR---CRHGWCR------YRCCSY

Query:  AGEVVE
        AGE ++
Subjt:  AGEVVE
P37704 Glycine-rich protein DC7.16.0e-0645.16Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGG--HDGHGHGGYRCRHGWCRYRCCSYA
        M SK F+ LGL  AF LLISS VAA DL+ T        T E   ++   +GG   G+  G   HGG  H G GHGG  C H +C   CCS A
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGG--HDGHGHGGYRCRHGWCRYRCCSYA
Q07202 Cold and drought-regulated protein CORA6.6e-0546.15Show/hide
Query:  SSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGG---YDRGYRRGRYDHGGHDGHGHGGY
        S KA + L LL   + LISS ++A DL  TS   +     +TN V DAKYGG   +  GY  G Y+HGG   HG GGY
Subjt:  SSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGG---YDRGYRRGRYDHGGHDGHGHGGY
Arabidopsis top hitse value%identityAlignment
AT2G05540.1 Glycine-rich protein family4.0e-0535.94Show/hide
Query:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNEN------VATMETNGVEDAKYGGY----------------DRGYRR---GRYDHGGHDGHGHGG
        M+SKA +FL L+   VLLI+S V A DLA  SA+ +N        T +  G     YGG+                  GYR    G  + GG  G+  GG
Subjt:  MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNEN------VATMETNGVEDAKYGGY----------------DRGYRR---GRYDHGGHDGHGHGG

Query:  YRCRHGWCR-------YRCCSYAGEVVE
        Y CR+G C        +RCC+YAG+ V+
Subjt:  YRCRHGWCR-------YRCCSYAGEVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCAAGGCTTTTGTTTTCCTCGGCCTTCTTTTCGCCTTTGTTCTCCTCATCTCTTCGAATGTGGCTGCGAGCGACCTCGCACACACCTCGGCCAAGAACGAAAA
TGTGGCTACAATGGAGACCAATGGCGTAGAGGATGCCAAGTATGGAGGATATGATAGGGGATACCGTCGTGGTCGCTACGATCATGGCGGCCATGATGGGCACGGTCATG
GTGGCTACCGTTGCCGGCATGGTTGGTGTCGCTACCGGTGCTGCAGCTACGCCGGTGAAGTGGTGGAGGGTGCAAAGCCATAA
mRNA sequenceShow/hide mRNA sequence
CATCTCAAAAAATCGATCTTTACTACACACAAAAAAATGAGCTCCAAGGCTTTTGTTTTCCTCGGCCTTCTTTTCGCCTTTGTTCTCCTCATCTCTTCGAATGTGGCTGC
GAGCGACCTCGCACACACCTCGGCCAAGAACGAAAATGTGGCTACAATGGAGACCAATGGCGTAGAGGATGCCAAGTATGGAGGATATGATAGGGGATACCGTCGTGGTC
GCTACGATCATGGCGGCCATGATGGGCACGGTCATGGTGGCTACCGTTGCCGGCATGGTTGGTGTCGCTACCGGTGCTGCAGCTACGCCGGTGAAGTGGTGGAGGGTGCA
AAGCCATAAGGCATAGTGGGTGTGCTGAAATAATGAAATGGTTTAATGTTTGAGAAATAAATGCATGGGGAATGGAATGCCTCGGCTGTTCTTTCTCCGTGTTTGGTTTT
TAGTGTGTTTCTGTTTGCAAATCCGGTTTCTATCTCGATAACTTGAGCATAGTTCAATCGGTAAAAATATCTATCTAAGTAAGCGATAATTAGCAGATATTTATTTCTTT
AAAGTCAGAACGTAACCCTACCTTTGTTGATTATTTGATTTCTATCTTAATATTAGGTTAACTAAAAAAACGTTCTTTTTAGTCAAATTACTTCATATAATTTGTGTTCA
ATTTTACGAGAAATCCTTAAAAAGAAACCGTCTTAAAGTGAGTGACCATTTTAAATTATTGGAAGCAGGAAAGATGTCCC
Protein sequenceShow/hide protein sequence
MSSKAFVFLGLLFAFVLLISSNVAASDLAHTSAKNENVATMETNGVEDAKYGGYDRGYRRGRYDHGGHDGHGHGGYRCRHGWCRYRCCSYAGEVVEGAKP