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CmoCh11G018590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationCmo_Chr11:12949237..12949584
RNA-Seq ExpressionCmoCh11G018590
SyntenyCmoCh11G018590
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589126.1 hypothetical protein SDJN03_17691, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5399.11Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
        MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCC YETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL

Query:  LMKAVQREAAAM
        LMKAVQREAAAM
Subjt:  LMKAVQREAAAM

KAG7022828.1 hypothetical protein SDJN02_16564, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-5498.26Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
        MSVELLDSATVVSFVEDEEAFGAAIRERFR LDVDGDGALSYTEMLKEFGSDEVCCAYE+ESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL

Query:  LMKAVQREAAAMVDA
        LMKAVQREAAAMVDA
Subjt:  LMKAVQREAAAMVDA

XP_022135904.1 uncharacterized protein LOC111007741 [Momordica charantia]3.6e-2856.49Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK
        MSVE+LDSAT+++FVEDEEAFGA IRERFRHLD D DG LSY EML+E          FG D              V   ++  SNG+VDLE+FM G K+
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQRE
        +M+AIAEG+GFLP+ MAL++DG LMKAV+ E
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQRE

XP_022930694.1 uncharacterized protein LOC111437091 [Cucurbita moschata]3.5e-55100Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
        MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL

Query:  LMKAVQREAAAMVDA
        LMKAVQREAAAMVDA
Subjt:  LMKAVQREAAAMVDA

XP_038887184.1 uncharacterized protein LOC120077371 [Benincasa hispida]1.1e-2959.09Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK
        MSVELLD AT+V+FVEDEEAF    RE F HLD DGDG LSY EMLKE          FG+D              V   ++ +SNGKVD+++FM GMK 
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA
        MM+AIAEG+GFLPI MAL+KDG LMKAVQREA
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA

TrEMBL top hitse value%identityAlignment
A0A1S3C0M6 uncharacterized protein LOC1034956561.5e-2756.82Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEF----------------GSDEVCCAY-------ETESNGKVDLEKFMRGMKK
        MSVELLD AT+V+FVEDEEAF    RE F  LD D DG LSY EMLKEF                 +DE+   Y       + +S+GKVD+++FM GMK 
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEF----------------GSDEVCCAY-------ETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA
        MM+AIAEG+GFLPI MAL+KDG LMKAVQREA
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA

A0A5A7UY59 Uncharacterized protein1.5e-2756.82Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEF----------------GSDEVCCAY-------ETESNGKVDLEKFMRGMKK
        MSVELLD AT+V+FVEDEEAF    RE F  LD D DG LSY EMLKEF                 +DE+   Y       + +S+GKVD+++FM GMK 
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEF----------------GSDEVCCAY-------ETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA
        MM+AIAEG+GFLPI MAL+KDG LMKAVQREA
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREA

A0A6J1C2G7 uncharacterized protein LOC1110078491.5e-2451.11Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS----------------DEVCCAY-------ETESNGKVDLEKFMRGMKK
        MSVELLD AT+VSFVEDEE FGA ++ERF HLD D DG LSY EML+E  S                DEV   Y       + + NGKVDL +FM   KK
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS----------------DEVCCAY-------ETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREAAAM
        MM+A+A G+G LPI M L+++G L KAV+RE   +
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQREAAAM

A0A6J1C2T1 uncharacterized protein LOC1110077411.7e-2856.49Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK
        MSVE+LDSAT+++FVEDEEAFGA IRERFRHLD D DG LSY EML+E          FG D              V   ++  SNG+VDLE+FM G K+
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKE----------FGSD-------------EVCCAYETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQRE
        +M+AIAEG+GFLP+ MAL++DG LMKAV+ E
Subjt:  MMMAIAEGLGFLPIHMALQKDGLLMKAVQRE

A0A6J1ES74 uncharacterized protein LOC1114370911.7e-55100Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
        MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGL

Query:  LMKAVQREAAAMVDA
        LMKAVQREAAAMVDA
Subjt:  LMKAVQREAAAMVDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.1e-0627.73Show/hide
Query:  LLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS-----DEVCCAYETESNGKVDLEKFMRGM---------KKMMMAIAEGLGFLP
        ++ S T++ F+ D ++F +   + F+ LD+D +G LS +E+ +   +      EV    ET++      E+F   +          +++ A+A G+G  P
Subjt:  LLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS-----DEVCCAYETESNGKVDLEKFMRGM---------KKMMMAIAEGLGFLP

Query:  IHMALQKDGLLMKAVQREA
        + M +  DGL+MKAV  E+
Subjt:  IHMALQKDGLLMKAVQREA

AT2G44310.1 Calcium-binding EF-hand family protein2.0e-1638.57Show/hide
Query:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS-----------------------DEVCCAYETESNGKVDLEKFMRGMKK
        M V L+D +TV SFV+DEE F  ++ ERF  LD++ DG LS +E+ K F S                       D +   ++T+ +G VDLE+F   MKK
Subjt:  MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGS-----------------------DEVCCAYETESNGKVDLEKFMRGMKK

Query:  MMMAIAEGLGFLPIHMAL--QKDGLLMKAVQREAAAMVDA
        +++AIA+GLG  PI M L    D  L KA   EA+ +  A
Subjt:  MMMAIAEGLGFLPIHMAL--QKDGLLMKAVQREAAAMVDA

AT4G38810.2 Calcium-binding EF-hand family protein3.0e-0427.59Show/hide
Query:  ELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEM---LKEFGS-----------------DEVCCAYETESNGKVDLEKFMRGMKKMMMAIA
        ++LD + +V  VE+E+ F   + ++F+ LD D DG LS TE+   + + G+                  EV   +   S  KV   +F   +  +++ +A
Subjt:  ELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEM---LKEFGS-----------------DEVCCAYETESNGKVDLEKFMRGMKKMMMAIA

Query:  EGLGFLPIHMALQKDG
         GL   PI + L+ DG
Subjt:  EGLGFLPIHMALQKDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAATTGCTAGACAGCGCCACCGTAGTGAGCTTCGTGGAGGACGAGGAAGCCTTCGGCGCCGCCATTAGGGAGCGTTTCAGGCACCTTGACGTCGACGGCGA
TGGCGCGCTGTCGTACACAGAGATGTTGAAGGAGTTTGGAAGCGATGAGGTTTGTTGTGCGTACGAAACGGAGTCGAATGGAAAAGTTGATTTGGAGAAGTTCATGAGGG
GAATGAAGAAGATGATGATGGCCATTGCTGAGGGATTAGGGTTCTTGCCGATTCATATGGCGCTGCAAAAAGATGGGTTGTTGATGAAAGCTGTTCAGAGAGAAGCCGCT
GCCATGGTAGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAATTGCTAGACAGCGCCACCGTAGTGAGCTTCGTGGAGGACGAGGAAGCCTTCGGCGCCGCCATTAGGGAGCGTTTCAGGCACCTTGACGTCGACGGCGA
TGGCGCGCTGTCGTACACAGAGATGTTGAAGGAGTTTGGAAGCGATGAGGTTTGTTGTGCGTACGAAACGGAGTCGAATGGAAAAGTTGATTTGGAGAAGTTCATGAGGG
GAATGAAGAAGATGATGATGGCCATTGCTGAGGGATTAGGGTTCTTGCCGATTCATATGGCGCTGCAAAAAGATGGGTTGTTGATGAAAGCTGTTCAGAGAGAAGCCGCT
GCCATGGTAGATGCTTGA
Protein sequenceShow/hide protein sequence
MSVELLDSATVVSFVEDEEAFGAAIRERFRHLDVDGDGALSYTEMLKEFGSDEVCCAYETESNGKVDLEKFMRGMKKMMMAIAEGLGFLPIHMALQKDGLLMKAVQREAA
AMVDA