; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G018650 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018650
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationCmo_Chr11:12977525..12977938
RNA-Seq ExpressionCmoCh11G018650
SyntenyCmoCh11G018650
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]4.7e-6797.08Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD ATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDC+GKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENS LK+AVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]3.8e-69100Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

XP_022989006.1 uncharacterized protein LOC111486199 [Cucurbita maxima]6.1e-6797.81Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD +TIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRD DGKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

XP_023529817.1 uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]1.0e-6697.81Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD ATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRD +GKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]5.2e-6696.35Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD ATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDC+GKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIG  PVQMVLEENS LKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein2.1e-5783.21Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEIL+SATI+NFVED+E F   +RERFSHLDID DGVL Y EML+ELQSLRV ETHFGID KPDP+ELSSVYGSLFLQFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MM+AMANGIG SPVQM+LEENSFLKKAV+RESTK+ A
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

A0A5D3DDG8 Calcium-binding EF-hand family protein2.8e-5783.21Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLRVFETHFGID KPDP+ELSSVY SLFLQFDRDC+GKVD+GEFM ETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MM+AMANGIG SPVQM+LEENSFLKKAV+RESTK+ A
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

A0A6J1EXF9 uncharacterized protein LOC1114370611.9e-69100Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

A0A6J1JEK7 uncharacterized protein LOC1114862002.8e-6596.35Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD ATIVNFVEDDEVFGAIVRERFSHLDID DGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRD DGKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIG SPVQMVLEENS LKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

A0A6J1JIT4 uncharacterized protein LOC1114861993.0e-6797.81Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        MSVEILD +TIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRD DGKVDVGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
        MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA
Subjt:  MMVAMANGIGFSPVQMVLEENSFLKKAVERESTKVGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein6.0e-1233.59Show/hide
Query:  ILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVA
        ++ S T++ F+ D + F +I  + F  LD+D +G+LS  E+ + L ++   E+    +V P  DE  +VY ++F +F  D   K     F +   +++ A
Subjt:  ILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVA

Query:  MANGIGFSPVQMVLEENSFLKKAVERES
        MA GIG SPV MV+  +  + KAV  ES
Subjt:  MANGIGFSPVQMVLEENSFLKKAVERES

AT2G44310.1 Calcium-binding EF-hand family protein1.9e-2944.53Show/hide
Query:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK
        M V ++D +T+ +FV+D+E F   V ERF+ LD++ DGVLS  E+ +  +S+R+ E+HFG+DV    DEL+++Y S+F +FD D  G VD+ EF  E KK
Subjt:  MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKK

Query:  MMVAMANGIGFSPVQMVL--EENSFLKKAVERESTKV
        +++A+A+G+G  P+ MVL  ++++FLKKA + E++K+
Subjt:  MMVAMANGIGFSPVQMVL--EENSFLKKAVERESTKV

AT4G38810.2 Calcium-binding EF-hand family protein1.2e-0725.6Show/hide
Query:  EILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMV
        ++LD + IV  VE+++VF   V ++F  LD D DG LS  E+   +  +       G+  +    +   +Y  +  +F      KV   EF E    +++
Subjt:  EILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMV

Query:  AMANGIGFSPVQMVLEENSFLKKAV
         MA G+   P+ ++  +   L + V
Subjt:  AMANGIGFSPVQMVLEENSFLKKAV

AT5G28830.1 calcium-binding EF hand family protein4.2e-0521.88Show/hide
Query:  VEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMM
        V ILD   +  F+ED++ F  +    F+ LD +  G L   E+ + L        H G+++   P     +   +  + D D D ++   +F E  ++++
Subjt:  VEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMM

Query:  VAMANGIGFSPVQMVLEENSFLKKAVER
          +A+ +   P+ +VL    F    + +
Subjt:  VAMANGIGFSPVQMVLEENSFLKKAVER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATTTTGGACAGTGCCACCATTGTCAACTTTGTGGAAGATGACGAAGTTTTTGGTGCAATAGTTCGAGAGCGTTTCAGTCACCTTGATATCGATGGAGA
TGGGGTTCTTTCTTATGAAGAGATGTTAAGGGAGTTGCAAAGTCTTAGGGTGTTCGAAACGCACTTTGGAATCGATGTGAAACCTGACCCGGACGAACTCTCTTCTGTTT
ATGGCTCGTTATTTCTGCAATTTGATCGAGACTGCGATGGGAAAGTTGATGTTGGTGAGTTCATGGAAGAAACCAAGAAGATGATGGTGGCAATGGCGAATGGAATAGGG
TTTTCGCCGGTTCAAATGGTGTTGGAAGAGAATAGTTTTTTGAAGAAAGCGGTGGAGAGAGAATCCACCAAAGTTGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATTTTGGACAGTGCCACCATTGTCAACTTTGTGGAAGATGACGAAGTTTTTGGTGCAATAGTTCGAGAGCGTTTCAGTCACCTTGATATCGATGGAGA
TGGGGTTCTTTCTTATGAAGAGATGTTAAGGGAGTTGCAAAGTCTTAGGGTGTTCGAAACGCACTTTGGAATCGATGTGAAACCTGACCCGGACGAACTCTCTTCTGTTT
ATGGCTCGTTATTTCTGCAATTTGATCGAGACTGCGATGGGAAAGTTGATGTTGGTGAGTTCATGGAAGAAACCAAGAAGATGATGGTGGCAATGGCGAATGGAATAGGG
TTTTCGCCGGTTCAAATGGTGTTGGAAGAGAATAGTTTTTTGAAGAAAGCGGTGGAGAGAGAATCCACCAAAGTTGGTGCTTAA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVAMANGIG
FSPVQMVLEENSFLKKAVERESTKVGA