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CmoCh11G018660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G018660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationCmo_Chr11:12980621..12981034
RNA-Seq ExpressionCmoCh11G018660
SyntenyCmoCh11G018660
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589131.1 hypothetical protein SDJN03_17696, partial [Cucurbita argyrosperma subsp. sororia]2.7e-6799.27Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVE+LDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

XP_022930659.1 uncharacterized protein LOC111437060 [Cucurbita moschata]1.2e-67100Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

XP_022989004.1 uncharacterized protein LOC111486198 [Cucurbita maxima]5.2e-6698.54Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAFGA IGDRFAHLDTNHDGLLS+SEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

XP_023529816.1 uncharacterized protein LOC111792530 [Cucurbita pepo subsp. pepo]2.7e-6799.27Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLS+SEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]4.1e-5585.19Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVED+ AFGA I DRFAHLDTNHDGLLS++EML+EL +LRV E  FGIDVKPDPDELSSVYSS+FLQFDR+SSGTVDLDEF AE KR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIM
        MML MANG+G LPVQMVLEEGSFLMKAVERE AIM
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIM

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein2.6e-5585.82Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVED+ AFGA I DRFAHLDTN DGLLS+SEML+EL +LRV E  FGIDVKPDPDELSSVYSS+FLQFDR+SSGTVDLDEF+AE KR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAI
        MMLAMANG+G LPVQMVLEEGSFLMKAVERE AI
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAI

A0A5D3E445 Calcium-binding EF-hand family protein7.6e-5585.07Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVED+ AFGA I DRFAHLDTNHDGLLS+SEML+EL +LRV E  FGIDVKPDP+ELSSVYSS+FLQFD +SSGTVDLDEFKAE KR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAI
        MML MANG+G LPVQMVLEEGSFLMKAVERE AI
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAI

A0A6J1C5B4 uncharacterized protein LOC1110075325.8e-5585.19Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAF A I DRFAHLDTNHDGLLS++EML+ELQSLRV E  FGIDVKPDPDELS+VYSS+FLQFD +SSG VDLDEFKAE KR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIM
        MMLA ANG+G LPVQMVLEEGSFLMKAVERE  IM
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIM

A0A6J1ES35 uncharacterized protein LOC1114370606.0e-68100Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

A0A6J1JN55 uncharacterized protein LOC1114861982.5e-6698.54Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        MSVEILDSATIVNFVEDEAAFGA IGDRFAHLDTNHDGLLS+SEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
        MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT
Subjt:  MMLAMANGIGALPVQMVLEEGSFLMKAVEREVAIMTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein2.1e-0931.5Show/hide
Query:  ILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLA
        ++ S T++ F+ D  +F +   D F  LD + +G+LS SE+ + L ++  +E+    +V P  DE  +VY+++F +F  +    +    F+     ++ A
Subjt:  ILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLA

Query:  MANGIGALPVQMVLEEGSFLMKAVERE
        MA GIG  PV MV+     +MKAV  E
Subjt:  MANGIGALPVQMVLEEGSFLMKAVERE

AT2G44310.1 Calcium-binding EF-hand family protein3.2e-2944.44Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR
        M V ++D +T+ +FV+DE  F   + +RFA LD N DG+LS SE+ K  +S+R++E+ FG+DV    DEL+++Y S+F +FD + SG+VDL+EF++E K+
Subjt:  MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKR

Query:  MMLAMANGIGALPVQMVL--EEGSFLMKAVEREVA
        ++LA+A+G+G+ P+ MVL  ++ +FL KA + E +
Subjt:  MMLAMANGIGALPVQMVL--EEGSFLMKAVEREVA

AT4G38810.2 Calcium-binding EF-hand family protein5.2e-0828Show/hide
Query:  EILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMML
        ++LD + IV  VE+E  F   +  +F  LD + DG LS +E+   +     I A  G+  +    +   +YS +  +F   S   V   EFK     ++L
Subjt:  EILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMML

Query:  AMANGIGALPVQMVLEEGSFLMKAV
         MA G+   P+ ++  +G  L + V
Subjt:  AMANGIGALPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCCTTTGGTGCCTGCATAGGAGACCGGTTTGCTCACCTCGACACGAATCATGA
CGGTCTCCTTTCCTTTAGTGAGATGTTGAAGGAGTTGCAGAGCCTCAGGGTCATCGAGGCCGATTTTGGAATCGACGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAGTTCTATGTTTTTGCAGTTTGATCGTAACTCGAGTGGAACGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATTGGA
GCTTTACCTGTTCAAATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAGTTGCTATAATGACAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAGATATTGGACAGTGCCACCATTGTCAACTTCGTCGAAGATGAGGCAGCCTTTGGTGCCTGCATAGGAGACCGGTTTGCTCACCTCGACACGAATCATGA
CGGTCTCCTTTCCTTTAGTGAGATGTTGAAGGAGTTGCAGAGCCTCAGGGTCATCGAGGCCGATTTTGGAATCGACGTGAAGCCTGATCCAGATGAGCTTTCTTCTGTCT
ATAGTTCTATGTTTTTGCAGTTTGATCGTAACTCGAGTGGAACGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATTGGA
GCTTTACCTGTTCAAATGGTGCTAGAAGAGGGCAGCTTCTTGATGAAGGCTGTTGAGAGAGAAGTTGCTATAATGACAACTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEAAFGACIGDRFAHLDTNHDGLLSFSEMLKELQSLRVIEADFGIDVKPDPDELSSVYSSMFLQFDRNSSGTVDLDEFKAENKRMMLAMANGIG
ALPVQMVLEEGSFLMKAVEREVAIMTT