CuGenDBv2

Gene ID	CmoCh11G018980
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	ThiF domain-containing protein
Genome location	Cmo_Chr11:13193571..13193951
RNA-Seq Expression	CmoCh11G018980
Synteny	CmoCh11G018980
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.4e-62

98.41

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022135897.1 uncharacterized protein LOC111007734 [Momordica charantia]

2.7e-53

88.89

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]

4.9e-63

100

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]

6.0e-61

98.41

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

3.5e-61

98.41

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C424 uncharacterized protein LOC111007734

1.3e-53

88.89

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS R SSLSPP+AP+DS LLQVNIVDASPCFAGRVYGP CLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLS SPTNL PDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC111437092

2.4e-63

100

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

1.5e-52

89.76

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSP TAPI S LLQVNI DASPCFAGRVYGPLCLQRKKLLAAK 
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-

Query:  SLWFLSSSPTNLTPDSPPDPVIEVLGG
        SLWFL+SSPTNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1HVZ0 uncharacterized protein LOC111468346

2.6e-49

85.83

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLS  T P+ S LLQVN+ DASPCFAGRVYGPLCLQRKKLLAAK 
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAK-

Query:  SLWFLSSSPTNLTPDSPPDPVIEVLGG
        SLWFL+SS TNLTPDSPPDPVI VLGG
Subjt:  SLWFLSSSPTNLTPDSPPDPVIEVLGG

A0A6J1JMJ5 uncharacterized protein LOC111486563

2.9e-61

98.41

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Query:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
        MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS
Subjt:  MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKS

Query:  LWFLSSSPTNLTPDSPPDPVIEVLGG
        LWFLSSS TNLTPDSPPDPVIEVLGG
Subjt:  LWFLSSSPTNLTPDSPPDPVIEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

6.3e-08

33.64

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Query:  RAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDS---ALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLW
        +   RS    ++ FH+Y+KPGALAQIRN    AR N       +  +    + PP++  +S   A  Q   +D  P    ++YGP  + RKKL  A+S  
Subjt:  RAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDS---ALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLW

Query:  F-LSSSPTNL
          L+ SP ++
Subjt:  F-LSSSPTNL

AT5G54970.1 unknown protein

1.8e-10

40.43

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Query:  RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVN--IVDASPCFAGRVYGPLCLQRKKLLAAKSL
        +S    S+ FH+YLKPGALAQIRNSR+ AR     +     S     +SP    +D A        +D  P    ++YGP   QRKKL AA+S+
Subjt:  RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVN--IVDASPCFAGRVYGPLCLQRKKLLAAKSL

Sequences

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CDS sequence

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ATGAATCGAAGATCCAGAGCGTTTCCCCGATCGTCCAAATCTCACTCCGAGACGTTCCATAAGTATCTAAAGCCCGGTGCTCTAGCGCAAATTCGGAATTCCCGGATGAT
CGCTCGATTCAATCGTGTCAATTTGGTATCTCAGATCTACTCCACTCGTTTCTCATCGCTTTCGCCGCCGACTGCGCCGATCGACTCCGCTTTGCTTCAGGTGAACATTG
TTGATGCTTCTCCTTGCTTTGCTGGGAGGGTGTACGGTCCACTCTGCTTGCAGAGGAAGAAACTTTTGGCTGCTAAGTCGTTGTGGTTTCTTAGTTCTAGTCCGACGAAT
TTGACTCCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGGGGTGA

mRNA sequence

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Protein sequence

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MNRRSRAFPRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRFSSLSPPTAPIDSALLQVNIVDASPCFAGRVYGPLCLQRKKLLAAKSLWFLSSSPTN
LTPDSPPDPVIEVLGG

CmoCh11G018980 (gene) of Cucurbita moschata (Rifu) v1 genome