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CmoCh11G019080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMelanoma inhibitory activity protein 3, putative
Genome locationCmo_Chr11:13255847..13256702
RNA-Seq ExpressionCmoCh11G019080
SyntenyCmoCh11G019080
Gene Ontology termsGO:0010089 - xylem development (biological process)
InterPro domainsIPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589172.1 Vascular-related unknown protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6097.62Show/hide
Query:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVD PPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  RIFDDDSLEDTATSPVLTPKVADLNV
          FDDDSLEDTATSPVLTPKVADLNV
Subjt:  RIFDDDSLEDTATSPVLTPKVADLNV

XP_022136166.1 uncharacterized protein LOC111007924 [Momordica charantia]2.3e-2057.03Show/hide
Query:  KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT

Query:  TQRIFDDDSLEDTATSPVLTPKVADLNV
        TQ+IF DDSLEDTATSPV +PKVADL V
Subjt:  TQRIFDDDSLEDTATSPVLTPKVADLNV

XP_022930798.1 vascular-related unknown protein 1-like [Cucurbita moschata]6.4e-63100Show/hide
Query:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  RIFDDDSLEDTATSPVLTPKVADLNV
        RIFDDDSLEDTATSPVLTPKVADLNV
Subjt:  RIFDDDSLEDTATSPVLTPKVADLNV

XP_022989009.1 vascular-related unknown protein 1-like [Cucurbita maxima]5.8e-5692.06Show/hide
Query:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKN   AGVDPPPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ
Subjt:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  RIFDDDSLEDTATSPVLTPKVADLNV
         IFDDDSLEDTATSPVLTPKVAD NV
Subjt:  RIFDDDSLEDTATSPVLTPKVADLNV

XP_038888852.1 vascular-related unknown protein 1-like [Benincasa hispida]1.5e-2456.82Show/hide
Query:  MDKKNAAAAGVDPPPEKSS-----SAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILDAPNKLSF
        M+K NA A G D PPE SS     +AA GAEE  ESGWT+YLEDY  SE    SS+L CSS GSCS WD + +N      ++    +G++I D PNKL+F
Subjt:  MDKKNAAAAGVDPPPEKSS-----SAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILDAPNKLSF

Query:  KKTTTQRIFDDDSLEDTATSPVLTPKVADLNV
        KKT TQ+IF+DDSL+DTATSP+ +PKVADL V
Subjt:  KKTTTQRIFDDDSLEDTATSPVLTPKVADLNV

TrEMBL top hitse value%identityAlignment
A0A0A0K3L1 Uncharacterized protein6.4e-1653.72Show/hide
Query:  DPPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKKTTTQRIF-DD
        D  PE SS  A   EE  ESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD           ++   ++G V  D     N L+FKKT TQ+IF DD
Subjt:  DPPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKKTTTQRIF-DD

Query:  DSLEDTATSPVLTPKVADLNV
        DSL+DTATSP+ +PKV DL V
Subjt:  DSLEDTATSPVLTPKVADLNV

A0A1S3C0F7 uncharacterized protein LOC1034955856.2e-1954.2Show/hide
Query:  DKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKK
        +  NA     D PPE SS+A  GAEE  ESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD           ++   +VG V  D     N L+FKK
Subjt:  DKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANKEKINGLSPFCSVGEVILD---APNKLSFKK

Query:  TTTQRIF-DDDSLEDTATSPVLTPKVADLNV
        T TQ+IF DDDSL+DTATSP+ +PKV DL V
Subjt:  TTTQRIF-DDDSLEDTATSPVLTPKVADLNV

A0A6J1C2S1 uncharacterized protein LOC1110079241.1e-2057.03Show/hide
Query:  KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT
        +KN  A  ++ P   ++++  G  E  ESGWT+YLEDY   S+IER+ SFL CSS GSCS D         N LSP  CSVGEV LD+P KL  FKK T 
Subjt:  KKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYL-WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSP-FCSVGEVILDAPNKL-SFKK-TT

Query:  TQRIFDDDSLEDTATSPVLTPKVADLNV
        TQ+IF DDSLEDTATSPV +PKVADL V
Subjt:  TQRIFDDDSLEDTATSPVLTPKVADLNV

A0A6J1ESI7 Uncharacterized protein3.1e-63100Show/hide
Query:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
Subjt:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  RIFDDDSLEDTATSPVLTPKVADLNV
        RIFDDDSLEDTATSPVLTPKVADLNV
Subjt:  RIFDDDSLEDTATSPVLTPKVADLNV

A0A6J1JN61 Uncharacterized protein2.8e-5692.06Show/hide
Query:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ
        MDKKN   AGVDPPPEKSSSAATGAEE  ESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKIN L+PFCSVGEVILDAPNKLS KKTTTQ
Subjt:  MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQ

Query:  RIFDDDSLEDTATSPVLTPKVADLNV
         IFDDDSLEDTATSPVLTPKVAD NV
Subjt:  RIFDDDSLEDTATSPVLTPKVADLNV

SwissProt top hitse value%identityAlignment
Q9LSZ3 Vascular-related unknown protein 12.6e-0635.19Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T++I +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA

Arabidopsis top hitse value%identityAlignment
AT3G21710.1 unknown protein1.8e-0735.19Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T++I +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA

AT3G21710.2 unknown protein1.8e-0735.19Show/hide
Query:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS
        G +   ESGWT YL+D+           ++ + KSS+   ++S S    +S+A     +G S         ++ P KL F +  T++I +DDSLEDTA+S
Subjt:  GAEEPSESGWTEYLEDYL---------WSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLEDTATS

Query:  PVLTPKVA
        PV +PKV+
Subjt:  PVLTPKVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGTCGGAGAGTGGGTGGACGGAGTATCT
AGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCAGAAGCCAATAAGGAAAAAATCAATG
GTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGAGGATTTTTGACGATGATTCCTTAGAAGAT
ACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGA
mRNA sequenceShow/hide mRNA sequence
ATCTCACGCTCTCAACATTCTTTGAATGGACAAGAAGAACGCCGCTGCAGCCGGTGTTGATCCGCCGCCGGAGAAATCCTCCTCCGCCGCCACAGGAGCTGAAGAACCGT
CGGAGAGTGGGTGGACGGAGTATCTAGAGGATTATTTGTGGTCGGAAATTGAGAGAAAAAGCAGTTTTTTGTGTTGTTCAAGTAGTGGGAGCTGTAGTTGGGACATTTCA
GAAGCCAATAAGGAAAAAATCAATGGTTTAAGCCCATTTTGTAGCGTTGGGGAGGTGATTTTGGATGCCCCAAACAAGCTAAGCTTCAAAAAAACAACAACTCAGAGGAT
TTTTGACGATGATTCCTTAGAAGATACGGCCACTTCTCCTGTTCTAACTCCAAAAGTTGCTGATTTGAACGTATGAACAACCCATCTAAATCCTAGGATCGATGAACATG
TCGTGATCCGTAACTCCACGGGCAGCAATGGCCATCGGGGAATTATGATTCAAACCCAGAAAAAGCTGCAGAGAAGCAAAGGAAAAAAGGGCTGTGTTTGAGTCCAATTT
ACATGTAATTTTAGCTCTCAAACTCGCTATTATAATCTATAATTCTCTCGTTTCGTTCGTTGTTTTGGATTATTCGAGTAATCAAGTTTTTTTCTTTCACCCAG
Protein sequenceShow/hide protein sequence
MDKKNAAAAGVDPPPEKSSSAATGAEEPSESGWTEYLEDYLWSEIERKSSFLCCSSSGSCSWDISEANKEKINGLSPFCSVGEVILDAPNKLSFKKTTTQRIFDDDSLED
TATSPVLTPKVADLNV