; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G019100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationCmo_Chr11:13267817..13268131
RNA-Seq ExpressionCmoCh11G019100
SyntenyCmoCh11G019100
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589175.1 hypothetical protein SDJN03_17740, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5199.04Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLD+EGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

KGN43536.1 hypothetical protein Csa_020453 [Cucumis sativus]7.2e-2863.55Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF-N
        MKLV +NLTGSLF+VEV+D ATV DLRT+I++   Q +LPS RL+F+PDH+  RLIS  DDG SLVDFGLRDGS IY+FF PL ++  DD++AR+ FF +
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF-N

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

XP_022136124.1 uncharacterized protein LOC111007894 [Momordica charantia]1.0e-2155.26Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEE-----GVDDLD----
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD E     G DD D    
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEE-----GVDDLD----

Query:  ARQLFFNCPDLLLF
        +R  FF C ++LLF
Subjt:  ARQLFFNCPDLLLF

XP_022930696.1 uncharacterized protein LOC111437093 [Cucurbita moschata]1.6e-51100Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

XP_022989504.1 uncharacterized protein LOC111486561 [Cucurbita maxima]2.2e-4893.27Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLIS ADDG SLVDFGLRDGSLIY+FFCPLD++G DD+DARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

TrEMBL top hitse value%identityAlignment
A0A0A0K6V6 Ubiquitin-like domain-containing protein3.5e-2863.55Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF-N
        MKLV +NLTGSLF+VEV+D ATV DLRT+I++   Q +LPS RL+F+PDH+  RLIS  DDG SLVDFGLRDGS IY+FF PL ++  DD++AR+ FF +
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISS---QQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF-N

Query:  CPDLLLF
          DLLLF
Subjt:  CPDLLLF

A0A314Y127 Ubiquitin-like domain-containing protein3.9e-1953.27Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFV-----PDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF
        MK+V ENLTG+LFYV+V + ATV DL+ EI +QQ LP DRL+F+      DH R +LI    DG  LVD+G++DGS IY+F  PLDEE  D        F
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFV-----PDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFF

Query:  NCPDLLL
        N PD LL
Subjt:  NCPDLLL

A0A6J1C3E5 uncharacterized protein LOC1110078944.9e-2255.26Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEE-----GVDDLD----
        MKL  ENLTGSLF+++V D ATV DL+ EIS+  +  LPSDRL+F+ D + GR IS  DDG SLVD G++DGS IY+FF PLD E     G DD D    
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQS--LPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEE-----GVDDLD----

Query:  ARQLFFNCPDLLLF
        +R  FF C ++LLF
Subjt:  ARQLFFNCPDLLLF

A0A6J1ERN4 uncharacterized protein LOC1114370937.8e-52100Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

A0A6J1JPI4 uncharacterized protein LOC1114865611.0e-4893.27Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL
        MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLIS ADDG SLVDFGLRDGSLIY+FFCPLD++G DD+DARQLFFNCPDL
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDL

Query:  LLFQ
        LLFQ
Subjt:  LLFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G32360.1 Ubiquitin-like superfamily protein2.9e-0634.62Show/hide
Query:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRL-LFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFF
        MK+  E +TG+    +V + ATV  ++ +I+ +  LP  RL L + D +  RL+   +D   L D G+ + S IY+FF
Subjt:  MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRL-LFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGGTGGCCGAGAACTTGACTGGTTCTCTGTTCTACGTTGAGGTTGACGACGGCGCCACCGTTCTTGATCTGAGAACCGAGATCAGTTCCCAGCAGAGCCTCCC
TTCCGACCGTCTCCTCTTCGTTCCCGACCACGACCGTGGCCGTCTCATATCCGCCGCCGACGACGGAACCTCGCTCGTTGATTTTGGGCTCCGAGATGGGTCGCTCATTT
ACGTCTTTTTCTGTCCACTTGATGAGGAGGGTGTCGATGATCTTGATGCTCGTCAGCTGTTCTTTAACTGTCCTGATCTTCTTCTCTTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGGTGGCCGAGAACTTGACTGGTTCTCTGTTCTACGTTGAGGTTGACGACGGCGCCACCGTTCTTGATCTGAGAACCGAGATCAGTTCCCAGCAGAGCCTCCC
TTCCGACCGTCTCCTCTTCGTTCCCGACCACGACCGTGGCCGTCTCATATCCGCCGCCGACGACGGAACCTCGCTCGTTGATTTTGGGCTCCGAGATGGGTCGCTCATTT
ACGTCTTTTTCTGTCCACTTGATGAGGAGGGTGTCGATGATCTTGATGCTCGTCAGCTGTTCTTTAACTGTCCTGATCTTCTTCTCTTTCAGTAG
Protein sequenceShow/hide protein sequence
MKLVAENLTGSLFYVEVDDGATVLDLRTEISSQQSLPSDRLLFVPDHDRGRLISAADDGTSLVDFGLRDGSLIYVFFCPLDEEGVDDLDARQLFFNCPDLLLFQ