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CmoCh11G019140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionB box-type domain-containing protein
Genome locationCmo_Chr11:13299106..13301902
RNA-Seq ExpressionCmoCh11G019140
SyntenyCmoCh11G019140
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589180.1 B-box domain protein 31, partial [Cucurbita argyrosperma subsp. sororia]9.1e-64100Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPR
        PSIVRSLVERNYRNYPCHPR
Subjt:  PSIVRSLVERNYRNYPCHPR

KGN43541.1 hypothetical protein Csa_020490 [Cucumis sativus]1.2e-3975.21Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE  Q AV QRR TD    A GGG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGASME+ +L 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPC
        PS+V    ERN+ NY C
Subjt:  PSIVRSLVERNYRNYPC

XP_008455408.1 PREDICTED: B-box zinc finger protein 21 [Cucumis melo]9.5e-3771.07Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE   P V QR  TD   A   GG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRG
        PSIV    ERN+ NY C   G
Subjt:  PSIVRSLVERNYRNYPCHPRG

XP_022989503.1 B-box domain protein 30-like [Cucurbita maxima]8.0e-6095Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQ AVEQRRRTDK TA GGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCS CQSH+QRYLLG SMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPR
        PSIVRSLVERNYRNYPCHPR
Subjt:  PSIVRSLVERNYRNYPCHPR

XP_023530332.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]9.4e-6195.83Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQE PPQPAVE+RRR DKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVH ANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPR
        PSIVR LVERNYRNYPCHPR
Subjt:  PSIVRSLVERNYRNYPCHPR

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein5.8e-4075.21Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE  Q AV QRR TD    A GGG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGASME+ +L 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPC
        PS+V    ERN+ NY C
Subjt:  PSIVRSLVERNYRNYPC

A0A1S3C0U6 B-box zinc finger protein 214.6e-3771.07Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE   P V QR  TD   A   GG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRG
        PSIV    ERN+ NY C   G
Subjt:  PSIVRSLVERNYRNYPCHPRG

A0A5A7TAC0 B-box zinc finger protein 214.6e-3771.07Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEE   P V QR  TD   A   GG+PV CELCGSRAS+YC+ADEAYLCGKCDKSVH ANFLA RHVRCLLC+TCQSHTQRYLLGAS  ME+++
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPRG
        PSIV    ERN+ NY C   G
Subjt:  PSIVRSLVERNYRNYPCHPRG

A0A6J1GNE7 B-box domain protein 301.9e-3074.19Show/hide
Query:  AAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIV-RSLVERNYRNYPC
        A GGGG+P  CELCGSRAS+YCQADEAYLC KCDK VH ANFLA RHVRCLLC+TCQ  T+RYLLGAS  ME++LPSIV  S +ERN++NY C
Subjt:  AAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIV-RSLVERNYRNYPC

A0A6J1JQG3 B-box domain protein 30-like3.9e-6095Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL
        MCKGVEQEEPPQ AVEQRRRTDK TA GGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCS CQSH+QRYLLG SMEMEILL
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILL

Query:  PSIVRSLVERNYRNYPCHPR
        PSIVRSLVERNYRNYPCHPR
Subjt:  PSIVRSLVERNYRNYPCHPR

SwissProt top hitse value%identityAlignment
O22800 Zinc finger protein CONSTANS-LIKE 143.3e-0853.06Show/hide
Query:  VACELCGSR-ASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTC
        VACE CG R A ++C+AD A LC  CD+ VH AN L+++HVR  +C  C
Subjt:  VACELCGSR-ASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTC

Q1G3I2 B-box domain protein 301.3e-1743.93Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM
        MC+G E+EE         RR+D    +         PV+CELCG  A++YC+AD A+LC KCD+ VH ANFLA+RH+R ++C+TC+  T+R L+G +   
Subjt:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM

Query:  EILLPSI
         ++LP I
Subjt:  EILLPSI

Q96502 Zinc finger protein CONSTANS-LIKE 22.5e-0847.46Show/hide
Query:  ACELCGSRA-SMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        AC+ C S A ++YC+AD AYLC  CD  VH AN +A RH R  +C +C+S    +L  A
Subjt:  ACELCGSRA-SMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Q9LJB7 B-box zinc finger protein 327.1e-1148.21Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG
        CELCG+ A ++C AD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG

Q9LRM4 B-box domain protein 317.9e-1845.95Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        MC+G+  EE         RR+D     GGG          PV CELC   AS++C+AD A+LC KCD+ VHGANFLA RHVR +LC++CQ  T+R L+G 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Query:  SMEMEILLPSI
          +  ++LPS+
Subjt:  SMEMEILLPSI

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 325.1e-1248.21Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG
        CELCG+ A ++C AD A+LC  CD   H +NFL  RH R ++C  C+S TQ ++ G
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLG

AT3G21890.1 B-box type zinc finger family protein5.6e-1945.95Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA
        MC+G+  EE         RR+D     GGG          PV CELC   AS++C+AD A+LC KCD+ VHGANFLA RHVR +LC++CQ  T+R L+G 
Subjt:  MCKGVEQEEPPQPAVEQRRRTDKTTAAGGG--------GEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGA

Query:  SMEMEILLPSI
          +  ++LPS+
Subjt:  SMEMEILLPSI

AT4G15248.1 B-box type zinc finger family protein9.5e-1943.93Show/hide
Query:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM
        MC+G E+EE         RR+D    +         PV+CELCG  A++YC+AD A+LC KCD+ VH ANFLA+RH+R ++C+TC+  T+R L+G +   
Subjt:  MCKGVEQEEPPQPAVEQRRRTD----KTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEM

Query:  EILLPSI
         ++LP I
Subjt:  EILLPSI

AT4G27310.1 B-box type zinc finger family protein7.1e-1462Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHT
        C+LC   A MYC++D+A LC  CD  VHGANFL  +H RCLLCS CQS T
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHT

AT5G54470.1 B-box type zinc finger family protein1.7e-1549.37Show/hide
Query:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVERNYRN
        CELC   A MYC++D+A LC  CD  VHGANFL  +H+RCLLCS CQSHT     G ++   +   SI  S + R   N
Subjt:  CELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVERNYRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGGAGTGGAGCAAGAAGAACCACCCCAACCCGCCGTCGAGCAGCGGCGGAGAACCGACAAGACGACGGCGGCGGGCGGGGGAGGCGAGCCAGTGGCGTGCGA
GCTCTGCGGTTCGAGGGCGTCGATGTACTGCCAAGCCGACGAAGCGTACTTGTGCGGAAAGTGCGACAAGTCGGTTCATGGCGCTAATTTCTTAGCGCAGCGGCACGTGC
GGTGCCTTCTGTGCAGCACGTGCCAGAGCCATACGCAGAGATATCTGTTGGGAGCTTCCATGGAAATGGAGATCCTGCTTCCTAGTATTGTGAGAAGTTTGGTGGAGAGG
AATTACCGAAATTATCCCTGTCATCCACGGGGAAGCAAATTCTCTCTCGGCCGTAACAATCCAGCGAGCATCGGCGGCGGAGGGATGCGATTCTCTGATATTTATCGAGT
TATCGGAAATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGGAGTGGAGCAAGAAGAACCACCCCAACCCGCCGTCGAGCAGCGGCGGAGAACCGACAAGACGACGGCGGCGGGCGGGGGAGGCGAGCCAGTGGCGTGCGA
GCTCTGCGGTTCGAGGGCGTCGATGTACTGCCAAGCCGACGAAGCGTACTTGTGCGGAAAGTGCGACAAGTCGGTTCATGGCGCTAATTTCTTAGCGCAGCGGCACGTGC
GGTGCCTTCTGTGCAGCACGTGCCAGAGCCATACGCAGAGATATCTGTTGGGAGCTTCCATGGAAATGGAGATCCTGCTTCCTAGTATTGTGAGAAGTTTGGTGGAGAGG
AATTACCGAAATTATCCCTGTCATCCACGGGGAAGCAAATTCTCTCTCGGCCGTAACAATCCAGCGAGCATCGGCGGCGGAGGGATGCGATTCTCTGATATTTATCGAGT
TATCGGAAATTTATAA
Protein sequenceShow/hide protein sequence
MCKGVEQEEPPQPAVEQRRRTDKTTAAGGGGEPVACELCGSRASMYCQADEAYLCGKCDKSVHGANFLAQRHVRCLLCSTCQSHTQRYLLGASMEMEILLPSIVRSLVER
NYRNYPCHPRGSKFSLGRNNPASIGGGGMRFSDIYRVIGNL