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CmoCh11G019280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTranscription factor, Myb superfamily
Genome locationCmo_Chr11:13357985..13358412
RNA-Seq ExpressionCmoCh11G019280
SyntenyCmoCh11G019280
Gene Ontology termsGO:0010597 - green leaf volatile biosynthetic process (biological process)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645760.1 hypothetical protein Csa_020345 [Cucumis sativus]7.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLV Y+QIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

KAG6589192.1 putative GPI-anchored protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-47100Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

XP_004137011.1 transcription factor MYB41 [Cucumis sativus]7.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLV Y+QIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

XP_022989033.1 transcription factor MYB41-like [Cucurbita maxima]7.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLVGY+QIHGPGNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

XP_023531401.1 transcription factor MYB41-like [Cucurbita pepo subsp. pepo]7.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLVGY+QIHGPGNWRNLPK AGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

TrEMBL top hitse value%identityAlignment
A0A0A0K293 Uncharacterized protein3.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLV Y+QIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

A0A1S3C0Q7 transcription factor MYB391.4e-4696.59Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDK+GLKKGPWTPEEDQKLV Y+QIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

A0A6J1C6N5 transcription factor MYB41-like1.1e-4696.59Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKL  Y+QIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

A0A6J1I1S0 transcription factor MYB41-like1.9e-4696.59Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLV YVQIHGPGNWRNLPKNAGL+RCGKSCRLRWTNYLRPDIKRGRF+FEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

A0A6J1JP23 transcription factor MYB41-like3.7e-4797.73Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGRAPCCDKNGLKKGPWTPEEDQKLVGY+QIHGPGNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

SwissProt top hitse value%identityAlignment
Q9LDR8 Transcription factor MYB1026.3e-4488.64Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        M R+PCC+KNGLKKGPWT EEDQKLV Y+Q HG GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS LGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

Q9LE63 Transcription factor MYB1062.5e-4077.27Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCDK GLKKGPWTPEEDQKL+ Y++ HG G+WR+LP+ AGLQRCGKSCRLRWTNYLRPDIKRG+F+ +EE+TIIQLH++LGN+
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

Q9LXF1 Transcription factor MYB169.5e-4076.14Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCDK GLKKGPWTPEEDQKL+ Y++ HG G+WR+LP+ AGL RCGKSCRLRWTNYLRPDIKRG+F+ +EE+TIIQLH++LGN+
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

Q9M0J5 Transcription factor MYB412.0e-4587.5Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCDKNG+KKGPWT EEDQKL+ Y++ HGPGNWR LPKNAGL RCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSV+GNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

Q9M0Y5 Transcription factor MYB741.7e-4487.64Show/hide
Query:  MGRAPCCD-KNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCC+ KNGLKKGPWTPEEDQKL+ Y+ IHG GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS++GNK
Subjt:  MGRAPCCD-KNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

Arabidopsis top hitse value%identityAlignment
AT1G34670.1 myb domain protein 936.7e-4178.41Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCD+NGLKKGPWTPEEDQKL+ Y+  HG G+WR LPK A L RCGKSCRLRWTNYLRPDIKRG+FS EEE+TI+ LHS+LGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

AT4G05100.1 myb domain protein 741.2e-4587.64Show/hide
Query:  MGRAPCCD-KNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCC+ KNGLKKGPWTPEEDQKL+ Y+ IHG GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS++GNK
Subjt:  MGRAPCCD-KNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

AT4G21440.1 MYB-like 1024.5e-4588.64Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        M R+PCC+KNGLKKGPWT EEDQKLV Y+Q HG GNWR LPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHS LGNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

AT4G28110.1 myb domain protein 411.4e-4687.5Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCDKNG+KKGPWT EEDQKL+ Y++ HGPGNWR LPKNAGL RCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSV+GNK
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK

AT5G15310.1 myb domain protein 166.7e-4176.14Show/hide
Query:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK
        MGR+PCCDK GLKKGPWTPEEDQKL+ Y++ HG G+WR+LP+ AGL RCGKSCRLRWTNYLRPDIKRG+F+ +EE+TIIQLH++LGN+
Subjt:  MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATGTTCAAATTCATGGGCCTGGGAATTG
GCGTAATCTTCCTAAGAATGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGGCCTGATATTAAGAGAGGAAGGTTTTCTTTTGAGG
AAGAAGAGACTATAATCCAATTGCATAGTGTCTTGGGAAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATGTTCAAATTCATGGGCCTGGGAATTG
GCGTAATCTTCCTAAGAATGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGGCCTGATATTAAGAGAGGAAGGTTTTCTTTTGAGG
AAGAAGAGACTATAATCCAATTGCATAGTGTCTTGGGAAACAAGTAA
Protein sequenceShow/hide protein sequence
MGRAPCCDKNGLKKGPWTPEEDQKLVGYVQIHGPGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNK