; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G019330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWound-responsive family protein
Genome locationCmo_Chr11:13369686..13369943
RNA-Seq ExpressionCmoCh11G019330
SyntenyCmoCh11G019330
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589195.1 hypothetical protein SDJN03_17760, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3898.82Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQV KLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

XP_022930885.1 uncharacterized protein LOC111437236 isoform X1 [Cucurbita moschata]3.3e-39100Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

XP_022930886.1 uncharacterized protein LOC111437236 isoform X2 [Cucurbita moschata]3.3e-39100Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

XP_023531405.1 uncharacterized protein LOC111793656 isoform X1 [Cucurbita pepo subsp. pepo]4.1e-3795.29Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVG+VEALKDQGVCRWNHTIRSVQQYAKSH RSASQVKKLSSPSS AVSDQKWKQS+ESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

XP_023531407.1 uncharacterized protein LOC111793656 isoform X3 [Cucurbita pepo subsp. pepo]4.1e-3795.29Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVG+VEALKDQGVCRWNHTIRSVQQYAKSH RSASQVKKLSSPSS AVSDQKWKQS+ESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

TrEMBL top hitse value%identityAlignment
A0A5D3C714 Uncharacterized protein5.0e-3383.53Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MS SR  WVVAASVG+VEALKDQG+CRWNHTIRS+QQYAK+HVRS SQ KKLSSPS+ AVSD +WKQSEESLRTVM+LSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

A0A6J1ES53 uncharacterized protein LOC111437236 isoform X21.6e-39100Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

A0A6J1EY16 uncharacterized protein LOC111437236 isoform X11.6e-39100Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

A0A6J1GJQ8 uncharacterized protein LOC1114549191.2e-3488.24Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSR AWVVAASVG+VEALKDQGVCRWNH I+SVQQYAK+HVRS SQ KKLSSPS+ AVSDQKWKQSEESLRTVM+LSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

A0A6J1HXF9 uncharacterized protein LOC1114683552.7e-3488.24Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN
        MSSSR AWVVAASVG+VEALKDQGVCRWNHTI+SVQQYAK+HVRS SQ KKLSS S+ AVSDQKWKQSEESLRTVM+LSCWGPNN
Subjt:  MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G05070.1 Wound-responsive family protein2.9e-0440.91Show/hide
Query:  GVCRWNHTIRSVQQYAKSHVRSASQVKK-------LSSPSSPAVSDQKWKQSEESLRTVMFLSCWG
        GV   + T+RS  + + S  +SAS           L S    A + ++ +Q+EESLRTVMFLSCWG
Subjt:  GVCRWNHTIRSVQQYAKSHVRSASQVKK-------LSSPSSPAVSDQKWKQSEESLRTVMFLSCWG

AT4G10265.1 Wound-responsive family protein1.4e-2263.53Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPN
        MSS+   W+VAAS+G VEALKDQ GVCRWN+ IRS  QY ++++RS SQ KKLSS S    +  K KQ+EESLRTVM+LSCWGP+
Subjt:  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPN

AT4G10270.1 Wound-responsive family protein2.6e-2157.78Show/hide
Query:  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV-----SDQKWKQSEESLRTVMFLSCWGPN
        MSS+  AW VA S+G VEALKDQ G+CRWN+ +RSV Q+ +++VRS SQ K+ SS S  A        +K K++EESLRTVM+LSCWGPN
Subjt:  MSSSRTAWVVAASVGLVEALKDQ-GVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAV-----SDQKWKQSEESLRTVMFLSCWGPN

AT4G33560.1 Wound-responsive family protein2.1e-0737.5Show/hide
Query:  SSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSP--SSPAVSDQKWKQS----EESLRTVMFLSCWGP
        +  + +W VA ++  VE LKDQGV RWN+  R + + A + VR+ +   + S P  SS A S +    S    E S    M LSC+GP
Subjt:  SSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSP--SSPAVSDQKWKQS----EESLRTVMFLSCWGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCA
GTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAA
CTGTCATGTTCTTGAGCTGTTGGGGTCCTAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCATCAAGAACAGCTTGGGTTGTCGCCGCCAGTGTCGGACTGGTGGAGGCTTTGAAAGATCAAGGGGTTTGCCGCTGGAATCACACGATTAGGTCGGTTCAGCA
GTACGCTAAAAGCCATGTGAGATCTGCTTCCCAGGTCAAGAAGCTTTCTTCGCCGTCGTCTCCGGCGGTTTCCGACCAGAAATGGAAGCAGTCGGAGGAATCTTTGAGAA
CTGTCATGTTCTTGAGCTGTTGGGGTCCTAATAATTGA
Protein sequenceShow/hide protein sequence
MSSSRTAWVVAASVGLVEALKDQGVCRWNHTIRSVQQYAKSHVRSASQVKKLSSPSSPAVSDQKWKQSEESLRTVMFLSCWGPNN