; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh11G019400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationCmo_Chr11:13411172..13413179
RNA-Seq ExpressionCmoCh11G019400
SyntenyCmoCh11G019400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589204.1 hypothetical protein SDJN03_17769, partial [Cucurbita argyrosperma subsp. sororia]4.4e-11092.47Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        G                 IQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

KAG7022904.1 hypothetical protein SDJN02_16640, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-10992.05Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSE SQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        G                 IQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

XP_022930792.1 uncharacterized protein LOC111437167 [Cucurbita moschata]6.9e-124100Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

XP_022988923.1 uncharacterized protein LOC111486133 [Cucurbita maxima]4.8e-11795.4Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDT VENIPGNGTLEDETVKEV L+TPISKPCDLQKPVPKFEEDKSP +EE GVPSVSETSQVTEWCSNMSESVSMATTISEQREGD+ASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        G+LQEIATT KR+EGDD IQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

XP_023531016.1 uncharacterized protein LOC111793398 [Cucurbita pepo subsp. pepo]7.3e-7394.94Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEV LDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSE SQVTEWCSNMSES+SMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHE
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCR+TQGR ESREARTRKKLS   E
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHE

TrEMBL top hitse value%identityAlignment
A0A5D3C531 Serine/arginine repetitive matrix protein 1-like1.0e-6457.91Show/hide
Query:  FSSHHLRARIRTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVE---------EGGVPS
        F+++      R +DRGQP          + P PG  DT VEN+P N T E+ETVKEV  +TPI+KPC +++  PK   ++  +           E  + S
Subjt:  FSSHHLRARIRTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVE---------EGGVPS

Query:  VSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREAR
        VSETSQVTEWCSNMSESVSMATTISEQREGDEASSK SREIGRN  PKIRRKRP SGD S RREQR                 RV+CR + G TESREAR
Subjt:  VSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREAR

Query:  TRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEG------DDEIQPPNESIENPLVSLECFIFL
        TRK     HEQQSGV HGRRSRSP AARTV  TNK  GN+KSS MK +G+ AG+ QE  TT+ R+EG      D  IQPPNESIENPLVSLECFIFL
Subjt:  TRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEG------DDEIQPPNESIENPLVSLECFIFL

A0A6J1ERM6 uncharacterized protein LOC1114371673.3e-124100Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

A0A6J1GNG7 uncharacterized protein LOC1114555161.4e-6660.55Show/hide
Query:  RTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSETSQVTE
        R ++ GQP          ++P PG   T V NIPG GT E+ETVKEV  +TPI+KPC++Q+  PK +      KS E++      E G  SVSE SQVTE
Subjt:  RTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSETSQVTE

Query:  WCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGH
        WCSNMSESVSMATTISEQREGDEASSKQSRE+GRN  PKIRRKRPYSGDPS RREQR                 RV+CR T G TESREARTR KL+GG 
Subjt:  WCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGH

Query:  EQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEG-------DDEIQPPNESIENPLVSLECFIFL
        EQ+SGV HGRRSRSP A RTV  TNK  GN+KSSA+K +G+ AGE  E  TT+KR+EG           QPPNESIENPLVSLECFIFL
Subjt:  EQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEG-------DDEIQPPNESIENPLVSLECFIFL

A0A6J1HYF2 uncharacterized protein LOC1114680621.1e-6660.21Show/hide
Query:  RTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSETSQVTE
        R ++ GQP          ++P PG   T V NIPG GT E+ETVKEV  +TPI+KPC++Q+  PK +      KS E++      E G  SVSE SQVTE
Subjt:  RTIDRGQPLC------PMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEED----KSPEVE------EGGVPSVSETSQVTE

Query:  WCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGH
        WCSNMSESVSMATTISEQREGDEASSKQSRE+GRN  PKIRRKRPYSGDPS RR+QR                 RV+CR T G TESREARTR KL+GG 
Subjt:  WCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQR----------------CRVSCRNTQGRTESREARTRKKLSGGH

Query:  EQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEGDDE-------IQPPNESIENPLVSLECFIFL
        EQ+SGV HGRRSRSP A +TV  TNK  GN+KSSA+K +G+ AGE  E  TT+KR+EG  +       IQPPNESIENPLVSLECFIFL
Subjt:  EQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEGDDE-------IQPPNESIENPLVSLECFIFL

A0A6J1JNR3 uncharacterized protein LOC1114861332.3e-11795.4Show/hide
Query:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK
        MRSPLPGSIDT VENIPGNGTLEDETVKEV L+TPISKPCDLQKPVPKFEEDKSP +EE GVPSVSETSQVTEWCSNMSESVSMATTISEQREGD+ASSK
Subjt:  MRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEEDKSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSK

Query:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
        QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA
Subjt:  QSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSGVGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAA

Query:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL
        G+LQEIATT KR+EGDD IQPPNESIENPLVSLECFIFL
Subjt:  GELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTGATCTGCTGTAGATCATGGGAGATAAAGCCTCAGTCTTTGGATTCCAATGCAGAAGCAGGTTGGATAGTGATCGAGTCGACATACAGGGCTCTGGTAATTTT
CTTCTCTAGTCATCATCTTCGAGCAAGGATAAGAACAATAGACAGAGGTCAGCCTCTTTGTCCCATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACA
TCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCCCTTAGATACTCCCATTTCCAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGAC
AAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGACATCTCAGGTTACGGAATGGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTC
AGAGCAAAGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACACCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTA
GAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGCGAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGA
GTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGATGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGC
TGCTGGTGAGCTGCAAGAGATAGCGACCACCAAGAAAAGAGAGGAAGGAGATGATGAAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTT
TCATCTTTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTGATCTGCTGTAGATCATGGGAGATAAAGCCTCAGTCTTTGGATTCCAATGCAGAAGCAGGTTGGATAGTGATCGAGTCGACATACAGGGCTCTGGTAATTTT
CTTCTCTAGTCATCATCTTCGAGCAAGGATAAGAACAATAGACAGAGGTCAGCCTCTTTGTCCCATGAGAAGTCCGTTACCGGGGTCCATCGACACCCGTGTCGAAAACA
TCCCCGGCAATGGAACCCTGGAAGACGAAACCGTCAAAGAAGTCCCCTTAGATACTCCCATTTCCAAGCCATGTGACCTGCAAAAACCAGTCCCAAAGTTTGAAGAAGAC
AAGTCTCCTGAGGTGGAGGAAGGGGGTGTCCCTTCAGTTTCAGAGACATCTCAGGTTACGGAATGGTGCAGCAATATGAGCGAAAGCGTGTCAATGGCGACCACCATTTC
AGAGCAAAGAGAAGGCGACGAAGCCTCAAGTAAACAGAGCAGAGAAATTGGTCGGAATACAACACCAAAGATTCGCAGAAAGCGTCCATATTCCGGCGACCCATCATGTA
GAAGAGAACAGAGGTGTCGTGTTAGTTGCAGGAACACACAGGGAAGGACAGAATCAAGAGAAGCGAGGACCAGGAAGAAGCTGAGTGGAGGGCACGAGCAGCAATCTGGA
GTCGGCCATGGGCGGCGTTCGAGGTCACCAGCTGCTGCTCGAACAGTTGGAGGCACGAACAAGATGGGGGGGAATGTGAAAAGCAGTGCCATGAAAGGGAGTGGACGAGC
TGCTGGTGAGCTGCAAGAGATAGCGACCACCAAGAAAAGAGAGGAAGGAGATGATGAAATTCAGCCCCCAAATGAATCCATTGAAAACCCACTTGTCTCACTTGAATGTT
TCATCTTTCTGTAG
Protein sequenceShow/hide protein sequence
MLLICCRSWEIKPQSLDSNAEAGWIVIESTYRALVIFFSSHHLRARIRTIDRGQPLCPMRSPLPGSIDTRVENIPGNGTLEDETVKEVPLDTPISKPCDLQKPVPKFEED
KSPEVEEGGVPSVSETSQVTEWCSNMSESVSMATTISEQREGDEASSKQSREIGRNTTPKIRRKRPYSGDPSCRREQRCRVSCRNTQGRTESREARTRKKLSGGHEQQSG
VGHGRRSRSPAAARTVGGTNKMGGNVKSSAMKGSGRAAGELQEIATTKKREEGDDEIQPPNESIENPLVSLECFIFL