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CmoCh11G019530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCASP-like protein
Genome locationCmo_Chr11:13460236..13460574
RNA-Seq ExpressionCmoCh11G019530
SyntenyCmoCh11G019530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589218.1 hypothetical protein SDJN03_17783, partial [Cucurbita argyrosperma subsp. sororia]4.5e-3094.94Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MKIAGLFA AAAA+ASTIVLS PPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHF PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

KAG7022918.1 hypothetical protein SDJN02_16654, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-3297.47Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MKIAGLFAVAAAAAASTIVLS PPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHF PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

XP_022952670.1 uncharacterized protein LOC111455296 [Cucurbita moschata]9.4e-2077.5Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS P SSAG+ KTTFSHQEKV +RDEE SPSR SPPSTAPD F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

XP_023554654.1 uncharacterized protein LOC111811842 [Cucurbita pepo subsp. pepo]2.3e-1875Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS P SS G+ KTTFSHQEKV +RDEE SPSR SPPSTA D F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

XP_038888462.1 uncharacterized protein LOC120078298 [Benincasa hispida]1.2e-1975Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEI-SPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS PPSSAG+ KTTFSHQE+V RD+EI +PSRRSPPSTA + F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEI-SPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

TrEMBL top hitse value%identityAlignment
A0A0A0K2C1 Uncharacterized protein4.3e-1872.5Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEE-ISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS PP+S GL KT FS QEKV RDEE  +P+RRSPPSTA D F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEE-ISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

A0A5D3C7A0 Uncharacterized protein4.7e-1772.84Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEI-SPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS PPSS    KT FSHQEKV  RDEEI +P+RRSPPSTA D F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEI-SPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

A0A6A4LEC7 Uncharacterized protein (Fragment)6.8e-0851.25Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTP-PSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MKI+G+ A A+AAAAS   +S+P PSS  L  +    + + + D+ +S   R  PS A D + PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTP-PSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

A0A6J1GMF4 uncharacterized protein LOC1114552964.6e-2077.5Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS P SSAG+ KTTFSHQEKV +RDEE SPSR SPPSTAPD F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

A0A6J1I0M0 uncharacterized protein LOC1114683571.5e-1876.25Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        MK  GLFA A+ AAAS   LS P SSAG+ KTTFSHQEKV  RDEE SPSR SPPSTA D F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKV-NRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28290.1 unknown protein2.4e-0538.55Show/hide
Query:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPD----HFDPRFDGLRFIETLVTAHR
        MK  G+ A + + AAS   +S   ++  +   +FS  E     +E    +R    ++ D     F PRFDGLRFIETLVTAHR
Subjt:  MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPD----HFDPRFDGLRFIETLVTAHR

AT5G42110.1 unknown protein2.0e-0441.56Show/hide
Query:  IAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR
        +A + AV+ AA +S+ +L  PP S                  ++  SR++  S   D+F+PRFDGLRFIETLVTAHR
Subjt:  IAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATAGCAGGGCTATTCGCCGTCGCCGCGGCCGCCGCCGCCTCCACCATCGTCCTGTCAACTCCGCCGTCCTCCGCCGGCCTCCACAAAACCACCTTCTCCCATCA
GGAAAAGGTCAACAGAGACGAGGAAATTAGTCCGTCGAGAAGATCCCCGCCGTCCACGGCGCCCGATCACTTTGATCCGAGATTCGATGGGTTGCGATTCATTGAAACTC
TAGTCACTGCTCATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATAGCAGGGCTATTCGCCGTCGCCGCGGCCGCCGCCGCCTCCACCATCGTCCTGTCAACTCCGCCGTCCTCCGCCGGCCTCCACAAAACCACCTTCTCCCATCA
GGAAAAGGTCAACAGAGACGAGGAAATTAGTCCGTCGAGAAGATCCCCGCCGTCCACGGCGCCCGATCACTTTGATCCGAGATTCGATGGGTTGCGATTCATTGAAACTC
TAGTCACTGCTCATAGATAA
Protein sequenceShow/hide protein sequence
MKIAGLFAVAAAAAASTIVLSTPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFDPRFDGLRFIETLVTAHR