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CmoCh11G019810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G019810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:13608897..13611185
RNA-Seq ExpressionCmoCh11G019810
SyntenyCmoCh11G019810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147934.1 putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia]4.1e-0439.64Show/hide
Query:  YAFDGVAYCTVIGAFLELVAFEGQNP------RPRYEHAELFSEKQENRKDREKKQDR------------LPCGQAYYPFCYYGAGRAGNIEGARRHLND
        YAFDG AYCTVIGAFL+L  FE  N       R R     +F     +   +E K D             L      +     G  RAGNI+GARRHLN 
Subjt:  YAFDGVAYCTVIGAFLELVAFEGQNP------RPRYEHAELFSEKQENRKDREKKQDR------------LPCGQAYYPFCYYGAGRAGNIEGARRHLND

Query:  MYMTGCSSKAI
        MY TG +S  +
Subjt:  MYMTGCSSKAI
TrEMBL top hitse value%identityAlignment
A0A6J1D2P0 putative pentatricopeptide repeat-containing protein At4g179152.0e-0439.64Show/hide
Query:  YAFDGVAYCTVIGAFLELVAFEGQNP------RPRYEHAELFSEKQENRKDREKKQDR------------LPCGQAYYPFCYYGAGRAGNIEGARRHLND
        YAFDG AYCTVIGAFL+L  FE  N       R R     +F     +   +E K D             L      +     G  RAGNI+GARRHLN 
Subjt:  YAFDGVAYCTVIGAFLELVAFEGQNP------RPRYEHAELFSEKQENRKDREKKQDR------------LPCGQAYYPFCYYGAGRAGNIEGARRHLND

Query:  MYMTGCSSKAI
        MY TG +S  +
Subjt:  MYMTGCSSKAI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCTTTTGATGGCGTTGCTTACTGCACAGTTATTGGTGCTTTTCTCGAGTTAGTTGCGTTTGAAGGGCAAAATCCCCGACCTAGATACGAGCACGCCGAGCTTTT
CAGCGAGAAGCAAGAAAATCGAAAGGACAGAGAAAAAAAGCAAGATAGACTTCCGTGTGGGCAGGCCTACTATCCATTTTGTTACTATGGAGCTGGGCGGGCTGGTAATA
TCGAGGGGGCCCGACGGCATTTGAATGACATGTATATGACAGGATGTTCGAGCAAAGCCATCACTCATCATCAGAAGAAATTGAATCGAAAAAACCATGGGAGGAGGAAG
GCTAGAACCGTGCATGTCAATAGAAAATTACAGAACCGCTGCCCCCAGCAACATGATAACGGAACCTCGTTGTCCAAGGACACTGCCGACACGCTTGAGCTTGCTACCAT
CCTCCTCTCATTCCTCTGTATCATGAAAACGCTGCTCCTGTTTCCCCGCACGTTTGTAGCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCTTTTGATGGCGTTGCTTACTGCACAGTTATTGGTGCTTTTCTCGAGTTAGTTGCGTTTGAAGGGCAAAATCCCCGACCTAGATACGAGCACGCCGAGCTTTT
CAGCGAGAAGCAAGAAAATCGAAAGGACAGAGAAAAAAAGCAAGATAGACTTCCGTGTGGGCAGGCCTACTATCCATTTTGTTACTATGGAGCTGGGCGGGCTGGTAATA
TCGAGGGGGCCCGACGGCATTTGAATGACATGTATATGACAGGATGTTCGAGCAAAGCCATCACTCATCATCAGAAGAAATTGAATCGAAAAAACCATGGGAGGAGGAAG
GCTAGAACCGTGCATGTCAATAGAAAATTACAGAACCGCTGCCCCCAGCAACATGATAACGGAACCTCGTTGTCCAAGGACACTGCCGACACGCTTGAGCTTGCTACCAT
CCTCCTCTCATTCCTCTGTATCATGAAAACGCTGCTCCTGTTTCCCCGCACGTTTGTAGCTGTCTGA
Protein sequenceShow/hide protein sequence
MYAFDGVAYCTVIGAFLELVAFEGQNPRPRYEHAELFSEKQENRKDREKKQDRLPCGQAYYPFCYYGAGRAGNIEGARRHLNDMYMTGCSSKAITHHQKKLNRKNHGRRK
ARTVHVNRKLQNRCPQQHDNGTSLSKDTADTLELATILLSFLCIMKTLLLFPRTFVAV