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CmoCh11G020000 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G020000
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr11:13688738..13691383
RNA-Seq ExpressionCmoCh11G020000
SyntenyCmoCh11G020000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8526310.1 hypothetical protein F0562_008487 [Nyssa sinensis]2.5e-0458.82Show/hide
Query:  RRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIV
        RR  LD RI   +HMS+L V D  SGA V ADQ PNS H VV+  DSLL V
Subjt:  RRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIV

KAG5561825.1 hypothetical protein RHGRI_004766 [Rhododendron griersonianum]1.9e-0443.48Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL
        A GL    A  +    S P R ++LDCR+   + M +LLV DGDSGAS G +Q   S H VV+  +S+L
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL

KAG6589260.1 hypothetical protein SDJN03_17825, partial [Cucurbita argyrosperma subsp. sororia]5.0e-3798.73Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIVHKGKREKL
        AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIVHKGK+EKL
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIVHKGKREKL

RDY14660.1 hypothetical protein CR513_00255, partial [Mucuna pruriens]1.5e-0440Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI
        A+G     + C+       GR + LDC I A +HM +LLV D +SGA V  D+   +CH VV+  D LL+
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI

THG18016.1 hypothetical protein TEA_001411 [Camellia sinensis var. sinensis]5.1e-0542.03Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL
        A GL      C         R +YLDCR+   +HM +LLV D +SGAS G DQ   SC  +V+  D LL
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL

TrEMBL top hitse value%identityAlignment
A0A1J3J0S7 Uncharacterized protein (Fragment)5.8e-0755.36Show/hide
Query:  SYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI
        S+S   RR  LD RID  LHMSLLL+ D  SG  +  DQS NSCH +V+  DS+LI
Subjt:  SYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI

A0A371IHY7 Uncharacterized protein (Fragment)7.2e-0540Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI
        A+G     + C+       GR + LDC I A +HM +LLV D +SGA V  D+   +CH VV+  D LL+
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLI

A0A4S4EPG9 Uncharacterized protein2.5e-0542.03Show/hide
Query:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL
        A GL      C         R +YLDCR+   +HM +LLV D +SGAS G DQ   SC  +V+  D LL
Subjt:  AIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLL

A0A5J5A760 Uncharacterized protein1.2e-0458.82Show/hide
Query:  RRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIV
        RR  LD RI   +HMS+L V D  SGA V ADQ PNS H VV+  DSLL V
Subjt:  RRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTGGGCTTCTTGCTCGGCTTGCCTTTTGCATTCGTTTCTCTTATTCTTTCCCTGGTCGGCGTAATTATCTGGATTGTCGGATTGACGCTTTCTTGCATATGTC
CTTGTTGCTTGTGCTTGACGGTGATAGTGGAGCTAGCGTTGGAGCTGATCAAAGCCCCAATTCATGTCATGCAGTGGTTTACTTCCCAGATTCCTTGTTGATTGTTCATA
AAGGGAAGCGGGAGAAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTGGGCTTCTTGCTCGGCTTGCCTTTTGCATTCGTTTCTCTTATTCTTTCCCTGGTCGGCGTAATTATCTGGATTGTCGGATTGACGCTTTCTTGCATATGTC
CTTGTTGCTTGTGCTTGACGGTGATAGTGGAGCTAGCGTTGGAGCTGATCAAAGCCCCAATTCATGTCATGCAGTGGTTTACTTCCCAGATTCCTTGTTGATTGTTCATA
AAGGGAAGCGGGAGAAGCTTTAAAGTTTGCTCAGTATAATTGCCTCACCTTCTGAACCAACTCCCGAAATCATATAGCTTCTCATTGCTTGTGGAGAAGTAGAGGTATCA
AAGTAATGGACAATAGCTTCTCCATTAACGAGAGATGGAAGCTTTGCTCATTCTTACAAGCTTCACAAGCATTATTGTCCGAGTGTTCTTGCTTGGAGGTTCATCACTAT
GCCTCTTCACTAGTTTTAACTAGTTATACGTCATCTTGTTGTCTCAATAGTTTGGGCCATAAGATCTCGTATACAAGTCTCTAGTGATTGTAGTAAGATGATAAAATAAG
GTTCAAAGGTTCAGAGCTCAGCAAGAAAGAAGCTTTTACGATCCCGCCAATGATAATCCTTTGAAAAATGAAAAGCATTCAAAAAATGGCTCGAGAAGCAAAACTGTCGA
CGTGTTTCAAGTTCTTCAAGTTATGGACCGTAATTCAAGTTTTTCATATGGTGCCTTAACACTTCTCTCTTATATTTATAGAGTTTTCTTTTGGTTCGTGAAATTGGGCT
TTAATGACCATCGGGCCCAACCATTCGACCTAACCCGTCTGAATTTGAGCTTTGACCAAATTTGAC
Protein sequenceShow/hide protein sequence
MAIGLLARLAFCIRFSYSFPGRRNYLDCRIDAFLHMSLLLVLDGDSGASVGADQSPNSCHAVVYFPDSLLIVHKGKREKL