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CmoCh11G020610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G020610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNucleolar complex protein 3-like protein
Genome locationCmo_Chr11:13958402..13959162
RNA-Seq ExpressionCmoCh11G020610
SyntenyCmoCh11G020610
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR011501 - Nucleolar complex-associated protein 3, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBA0668190.1 hypothetical protein [Gossypium klotzschianum]1.2e-0450Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL---GFLQCITGDLDALFVKRI
        + I  Y IRLPT KELEM+VSK V+KMR Y STLL AYKC   LL     L  I G++   +++++
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL---GFLQCITGDLDALFVKRI
XP_015937458.2 LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog [Arachis duranensis]3.5e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
XP_016169962.1 nucleolar complex protein 3 homolog [Arachis ipaensis]3.5e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
XP_025615651.1 nucleolar complex protein 3 homolog [Arachis hypogaea]3.5e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
XP_025671492.1 nucleolar complex protein 3 homolog isoform X2 [Arachis hypogaea]3.5e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
TrEMBL top hitse value%identityAlignment
A0A059C4F0 Uncharacterized protein2.2e-0457.69Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQCIT
        + I  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L  L+ ++
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQCIT
A0A445C0S8 Uncharacterized protein1.7e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
A0A6P4BGP7 LOW QUALITY PROTEIN: nucleolar complex protein 3 homolog1.7e-0459.18Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + +  Y IRLPT KELEM+VSK V+KMR Y STLL AYK  L+ L +L+
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
A0A7J0G9C9 Binding protein2.2e-0463.27Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
        + I  Y IRLPT KELEM VSK V+KMR Y STLL AYK  L+ L  LQ
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQ
A0A7J8VZZ7 Uncharacterized protein5.9e-0550Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL---GFLQCITGDLDALFVKRI
        + I  Y IRLPT KELEM+VSK V+KMR Y STLL AYKC   LL     L  I G++   +++++
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL---GFLQCITGDLDALFVKRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79150.1 binding1.4e-0660Show/hide
Query:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL
        + I  Y IRLPT KELEM++SK V+K R Y STLL AYK  L+ L
Subjt:  ECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGCATATACAGTTACTGGATTAGGCTTCCAACAGCAAAGGAGCTAGAAATGGAAGTATCCAAGGGTGTTCAGAAAATGCGGAGCTACGGGTCTACTCTTCTCAT
TGCTTATAAGTGTAGACTGAAACTTCTTGGTTTTTTGCAATGCATAACTGGGGATCTAGATGCCTTATTTGTTAAGAGGATCTCCTTTTAG
mRNA sequenceShow/hide mRNA sequence
CCTTCTTTTTCTTCCCGCCATCTCCTCCTCCGTTTCAGCAGCTCAGTAGCCCGCCGTCTTCTTTCTTCTATGCCGCTGCCCCCTCCCTCTGTAATCTTTAACCACTCGAA
GGAGGCTTTCATTCTGTCTTCTCCATGCGGTAGATACGTAATAACGAGAAACAGAAGCTAATTCTACCGCCGGAGTTTCCACCAGAGCTCACCGATGAAGAAGTTGAGGT
CTCCGAAGGGGAAGAAGTTGACGTCTCAGAAGTTGCATCATTTGTTAATTACTCTGCTATGGAATGCATATACAGTTACTGGATTAGGCTTCCAACAGCAAAGGAGCTAG
AAATGGAAGTATCCAAGGGTGTTCAGAAAATGCGGAGCTACGGGTCTACTCTTCTCATTGCTTATAAGTGTAGACTGAAACTTCTTGGTTTTTTGCAATGCATAACTGGG
GATCTAGATGCCTTATTTGTTAAGAGGATCTCCTTTTAG
Protein sequenceShow/hide protein sequence
MECIYSYWIRLPTAKELEMEVSKGVQKMRSYGSTLLIAYKCRLKLLGFLQCITGDLDALFVKRISF