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CmoCh11G020670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh11G020670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDefensin-like protein 3
Genome locationCmo_Chr11:13986940..13987342
RNA-Seq ExpressionCmoCh11G020670
SyntenyCmoCh11G020670
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062792.1 defensin-like protein 3 [Cucumis melo var. makuwa]8.7e-2673.08Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC
        M GE L+KLTVV  IFL  ASGWMVVQTEGLTCYK S AF G C  A EC RVC   EGWDDGFCSGDKC CT +CCC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC

KAE8646110.1 hypothetical protein Csa_016182 [Cucumis sativus]3.3e-2571.79Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC
        M GE L+KLTVV  IFLA ASGWMVVQTEGLTCY+ S  F G C  A ECA VC   EGWDDGFCS DKC CT+QCCC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC

KAG6590329.1 Defensin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2573.68Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L+ L VV FIFLALASGWMVVQTEG TCYK ++AFIG CT    CA  CI+ EGWDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

XP_022931766.1 defensin Tk-AMP-D4-like [Cucurbita moschata]1.1e-2573.68Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L+ L VV FIFLALASGWMVVQTEG TCYK ++AFIG CT    CA  CI+ EGWDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

XP_023520732.1 defensin-like protein 2 [Cucurbita pepo subsp. pepo]1.9e-2573.68Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        M G++L+ L VV FIFLALASGWMVVQTEG TCYK ++AFIG CT    CA  CIS EGWDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

TrEMBL top hitse value%identityAlignment
A0A5A7V3H5 Defensin-like protein 34.2e-2673.08Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC
        M GE L+KLTVV  IFL  ASGWMVVQTEGLTCYK S AF G C  A EC RVC   EGWDDGFCSGDKC CT +CCC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC

A0A6J1EUK4 defensin Tk-AMP-D4-like5.5e-2673.68Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L+ L VV FIFLALASGWMVVQTEG TCYK ++AFIG CT    CA  CI+ EGWDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

A0A6J1HW18 defensin-like protein 53.0e-2472.37Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L  L +V FIFLAL SGWMVVQTEG TCYK S+AFIG C +A  CA +CIS E WDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

A0A6J1IBG0 defensin-like protein 51.8e-2472.37Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L+ L +V FIFLAL SGWMVVQTEG TCYK S+AFIG C +A  CA +CIS E WDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

A0A6J1IH26 defensin-like protein 51.8e-2472.37Show/hide
Query:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC
        MAG++L+ L +V FIFLAL SGWMVVQTEG TCYK S+AFIG C +A  CA +CIS E WDDGFCSGDKCTCT+QC
Subjt:  MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAAAACTTAAAAAAGCTCACAGTTGTTGCGTTCATCTTTCTAGCCCTTGCTTCTGGATGGATGGTGGTACAAACGGAGGGGCTGACTTGCTATAAAGACAG
CGAGGCGTTTATAGGACAGTGCACTTTGGCAGTGGAATGTGCTAGAGTCTGCATTTCGTCTGAGGGGTGGGATGACGGTTTTTGTTCAGGTGATAAATGCACTTGTACCC
GGCAATGCTGTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAGAAAACTTAAAAAAGCTCACAGTTGTTGCGTTCATCTTTCTAGCCCTTGCTTCTGGATGGATGGTGGTACAAACGGAGGGGCTGACTTGCTATAAAGACAG
CGAGGCGTTTATAGGACAGTGCACTTTGGCAGTGGAATGTGCTAGAGTCTGCATTTCGTCTGAGGGGTGGGATGACGGTTTTTGTTCAGGTGATAAATGCACTTGTACCC
GGCAATGCTGTTGTTAAGTCCATGGTTTAATGAGTTTATTCACCAAAGTTACTCTCTGAATGTAATAAGGAACTGTTAGTTCACTGAAATTCAAAGGCTCCTG
Protein sequenceShow/hide protein sequence
MAGENLKKLTVVAFIFLALASGWMVVQTEGLTCYKDSEAFIGQCTLAVECARVCISSEGWDDGFCSGDKCTCTRQCCC