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CmoCh12G001200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G001200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWW domain-containing protein
Genome locationCmo_Chr12:736829..737798
RNA-Seq ExpressionCmoCh12G001200
SyntenyCmoCh12G001200
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001202 - WW domain
IPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585292.1 hypothetical protein SDJN03_18025, partial [Cucurbita argyrosperma subsp. sororia]3.3e-10396.89Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQS PSSLNDKR EVR SSENLAKKRKWEQPLQPPQINSIFD+ELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCES DKNN+QTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

XP_022952019.1 uncharacterized protein LOC111454730 [Cucurbita moschata]2.9e-107100Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

XP_023002678.1 uncharacterized protein LOC111496462 [Cucurbita maxima]9.7e-10396.37Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQS PSSLNDKR EVR  SENLAKKRKWEQPLQPPQINSIFD+ELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDES+
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCES DKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

XP_023538128.1 uncharacterized protein LOC111798987 [Cucurbita pepo subsp. pepo]1.3e-10295.85Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQS PSS NDKR EVR SSENLAKKRKWEQPLQPPQINSIFD+ELHLETPLPFDWQRCLDIQSG+IHFYNTTTQKRTSKDPRDKLDIDDD+EGDESD
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCES DKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

XP_038885611.1 sodium/hydrogen exchanger 1-like [Benincasa hispida]2.5e-7473.53Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQ  PSSLNDK   ++ +++NLAKKRKWE+      +NS+FD+ELHLETPLPF WQRCLDIQSGKIHFYNTTTQKRT KDPRDKL+ DD+ E D++D
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  E--DMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS--PEQTSPAMLKRRC
        E  DMSLDLELNLTCES DK NNNQ  QGGR+AI  G +FGSSENY      + EMVAAVCMRCHLLVMMCKSSPECPNCKF+NS  PEQTSPAM KRRC
Subjt:  E--DMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS--PEQTSPAMLKRRC

Query:  YLSW
        +LSW
Subjt:  YLSW

TrEMBL top hitse value%identityAlignment
A0A1S3BAS4 uncharacterized protein LOC1034880582.1e-7171.09Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPL--QPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKL----DIDDDV
        MVPFQS PSSLNDK   ++  ++NLAKKRKWE+ +   PP +NS+ D+ELHLETPLPF WQRCLDIQSGKIHFYN TTQKRT +DPRDKL    D DDD 
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPL--QPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKL----DIDDDV

Query:  EGDESD----EDMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS-PEQTSP
        EG + D     DMSLDLELNLTCES DK NNNQT QG RRAI  G +FG SENY     ++ EMVAAVCMRCHLLVM+CKSSPECPNCKF+NS PEQTSP
Subjt:  EGDESD----EDMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS-PEQTSP

Query:  AMLKRRCYLSW
        AM KRRC+LSW
Subjt:  AMLKRRCYLSW

A0A5A7VAF4 WW domain-containing protein2.1e-7171.09Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPL--QPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKL----DIDDDV
        MVPFQS PSSLNDK   ++  ++NLAKKRKWE+ +   PP +NS+ D+ELHLETPLPF WQRCLDIQSGKIHFYN TTQKRT +DPRDKL    D DDD 
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPL--QPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKL----DIDDDV

Query:  EGDESD----EDMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS-PEQTSP
        EG + D     DMSLDLELNLTCES DK NNNQT QG RRAI  G +FG SENY     ++ EMVAAVCMRCHLLVM+CKSSPECPNCKF+NS PEQTSP
Subjt:  EGDESD----EDMSLDLELNLTCESFDK-NNNQTTQGGRRAI--GGMFGSSENY----KQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINS-PEQTSP

Query:  AMLKRRCYLSW
        AM KRRC+LSW
Subjt:  AMLKRRCYLSW

A0A6J1BS22 uncharacterized protein LOC1110050384.6e-7475.39Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWE---QPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGD
        MVPFQ  PSSLNDKR+ +R  ++ LAKKRKWE    P  PP  NSIFD+ELHLETPLP DWQRCLDIQSGKIHFYNTTT KRTSKDPRD++D +DD E  
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWE---QPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGD

Query:  ESDEDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRR
        E D+DMSLDLELNLTC+S DKN+NQ TQGGR+ + G+FGSSENY  + EMVAAVCMRCHLLVM+CKSSPECPNCKF+NSPE T PAMLKRR
Subjt:  ESDEDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRR

A0A6J1GKF5 uncharacterized protein LOC1114547301.4e-107100Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

A0A6J1KU99 uncharacterized protein LOC1114964624.7e-10396.37Show/hide
Query:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD
        MVPFQS PSSLNDKR EVR  SENLAKKRKWEQPLQPPQINSIFD+ELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDES+
Subjt:  MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESD

Query:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
        EDMSLDLELNLTCES DKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW
Subjt:  EDMSLDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22250.1 unknown protein1.5e-0845.65Show/hide
Query:  GSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTS
        G  ++ +++ EM+  VCM+CH+LVM+CKS+  CPNCKF++  + +S
Subjt:  GSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTS

AT1G78170.1 unknown protein1.0e-1233.33Show/hide
Query:  EQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESDEDMSLDLELNL---------TCESFDKN--N
        E+P      +  FD ELHL TPLP DWQ              T    RTS + R     D  + G      MSLDLELNL         T + ++ +  +
Subjt:  EQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESDEDMSLDLELNL---------TCESFDKN--N

Query:  NQT---------TQGGRRAIGG-----------MFGSSEN---YKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLK
        N+T         T   +++I G             G  +N   +K Q EMV  VCM+CH+LVM+C S+P CPNCKF++  + +S  + K
Subjt:  NQT---------TQGGRRAIGG-----------MFGSSEN---YKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLK

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)2.8e-0727.38Show/hide
Query:  SLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDE-----SDEDMS
        SLND+R  V G     +   +   P+      S   +EL+    LP  W++CLD+++G+I++ N     R  +DPR  ++ D D  GD      S+ED S
Subjt:  SLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDE-----SDEDMS

Query:  -LDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNC
          D E + +  S     N   +             E  +++  +V A C  C +  M+ K   +CP C
Subjt:  -LDLELNLTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNC

AT4G08910.1 unknown protein2.5e-1132.09Show/hide
Query:  DKLDIDDDVEGDESDEDMSLDLELNLTCESFDKNNNQTTQGGRRAI------------GGMF----------------------GSSENYKQQTEMVAAV
        D  ++++++E   +   MSLDLELNL+    D N++       +              G +                       G     + + EMVA V
Subjt:  DKLDIDDDVEGDESDEDMSLDLELNLTCESFDKNNNQTTQGGRRAI------------GGMF----------------------GSSENYKQQTEMVAAV

Query:  CMRCHLLVMMCKSSPECPNCKFINSPEQTSPAML
        CM+CH+LVM+CK+SP CPNCKF++SPE TS ++L
Subjt:  CMRCHLLVMMCKSSPECPNCKFINSPEQTSPAML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCCTTTCAATCCCCCCCTTCTTCTCTAAATGACAAGAGATTAGAAGTTCGAGGGTCTTCCGAGAATTTAGCAAAGAAGAGGAAGTGGGAACAACCGTTGCAACC
ACCGCAGATCAATTCCATATTCGATGTCGAGCTTCACCTCGAAACTCCGTTACCGTTCGATTGGCAACGATGTCTTGACATTCAGTCGGGGAAGATACATTTCTATAACA
CGACGACTCAGAAGAGAACGTCGAAGGATCCAAGGGACAAGCTTGATATAGACGATGACGTCGAGGGAGACGAAAGCGACGAGGACATGAGTTTGGACCTCGAGCTCAAC
TTGACATGCGAATCGTTCGACAAGAACAACAATCAAACAACACAAGGAGGGCGGCGAGCCATAGGTGGAATGTTCGGCTCGTCGGAAAATTACAAGCAGCAAACGGAGAT
GGTGGCCGCCGTTTGCATGAGGTGTCACTTGTTAGTGATGATGTGTAAATCTTCGCCGGAGTGTCCTAACTGCAAATTCATAAACTCGCCGGAGCAGACCTCGCCGGCGA
TGCTAAAACGCCGGTGTTACCTTTCTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATCCCAAACACAAGAAAAAACAACATAGCCCATTTAGAGCCATGGTTCCCTTTCAATCCCCCCCTTCTTCTCTAAATGACAAGAGATTAGAAGTTCGAGGGTCTTCCGAG
AATTTAGCAAAGAAGAGGAAGTGGGAACAACCGTTGCAACCACCGCAGATCAATTCCATATTCGATGTCGAGCTTCACCTCGAAACTCCGTTACCGTTCGATTGGCAACG
ATGTCTTGACATTCAGTCGGGGAAGATACATTTCTATAACACGACGACTCAGAAGAGAACGTCGAAGGATCCAAGGGACAAGCTTGATATAGACGATGACGTCGAGGGAG
ACGAAAGCGACGAGGACATGAGTTTGGACCTCGAGCTCAACTTGACATGCGAATCGTTCGACAAGAACAACAATCAAACAACACAAGGAGGGCGGCGAGCCATAGGTGGA
ATGTTCGGCTCGTCGGAAAATTACAAGCAGCAAACGGAGATGGTGGCCGCCGTTTGCATGAGGTGTCACTTGTTAGTGATGATGTGTAAATCTTCGCCGGAGTGTCCTAA
CTGCAAATTCATAAACTCGCCGGAGCAGACCTCGCCGGCGATGCTAAAACGCCGGTGTTACCTTTCTTGGTAAAGTGATAATTATAATTAAAACTTTCCTTCTTTAATTT
GTGTTATTGTCATCAACTTTTTAAAAAAGATTATATGGGGAGGTTTGTAATGTGTAAATATACAAATTTGTGTTTTTATTTGTTATAAACGTCGAAAACGTTCCTTCAAA
TTGGTTTGTCGGTGAACAACGAGAAAGAAAAACGAAATATTTCGATACGATACAATTCTCTTTATAACGGGCAGCCTAAAACCTAC
Protein sequenceShow/hide protein sequence
MVPFQSPPSSLNDKRLEVRGSSENLAKKRKWEQPLQPPQINSIFDVELHLETPLPFDWQRCLDIQSGKIHFYNTTTQKRTSKDPRDKLDIDDDVEGDESDEDMSLDLELN
LTCESFDKNNNQTTQGGRRAIGGMFGSSENYKQQTEMVAAVCMRCHLLVMMCKSSPECPNCKFINSPEQTSPAMLKRRCYLSW