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CmoCh12G001660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G001660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBnaC07g27580D protein
Genome locationCmo_Chr12:1100081..1100633
RNA-Seq ExpressionCmoCh12G001660
SyntenyCmoCh12G001660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065108.1 hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]4.7e-2977.55Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDE RA+T     PPQD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVGWGKK+TAKSEKEAAEADLK AKMQV+ATEAAEN K GT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
KAG7020262.1 hypothetical protein SDJN02_16945, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-4298Show/hide
Query:  MDEIRAST--PPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRAST  PPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
Subjt:  MDEIRAST--PPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
XP_022951050.1 uncharacterized protein LOC111454014 [Cucurbita moschata]1.2e-43100Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
XP_023001883.1 uncharacterized protein LOC111495934 [Cucurbita maxima]5.2e-3690.82Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRAST    PP QD+GAGRFSG KEEASVMDRVKKGC AVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAEN KKGT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
XP_023537005.1 uncharacterized protein LOC111798221 [Cucurbita pepo subsp. pepo]2.5e-3892.86Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRAST  PPPPPQDEGAGRFSGSKEEASVMDRVKKGC AVYASSQEA+RYVKAF VGWGKKM A+SEKEAAEADLKMAKMQVEATEAAENAKKGT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
TrEMBL top hitse value%identityAlignment
A0A1S3BC67 uncharacterized protein LOC1034881095.1e-2976.53Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDE RA+T     PPQD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVGWGKK+TAKSEKEAAEADL+ AKMQV+ATEAAEN K GT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
A0A5A7VBV2 Uncharacterized protein2.3e-2977.55Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDE RA+T     PPQD+GA  FSG K+EASVMDRVKKGC + YASSQE L YVKAFFVGWGKK+TAKSEKEAAEADLK AKMQV+ATEAAEN K GT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
A0A6J1BRY6 uncharacterized protein LOC1110050103.1e-1880.95Show/hide
Query:  MDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAK
        MDR+K GC + YASSQE LRYVKAFFVGWGKKMTAK+E+EAA+ADLK AKMQV+ATEAAEN K
Subjt:  MDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAK
A0A6J1GHI8 uncharacterized protein LOC1114540145.6e-44100Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
A0A6J1KRV8 uncharacterized protein LOC1114959342.5e-3690.82Show/hide
Query:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
        MDEIRAST    PP QD+GAGRFSG KEEASVMDRVKKGC AVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAEN KKGT
Subjt:  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38465.1 unknown protein6.6e-1359.09Show/hide
Query:  SVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKK
        S+ DRVK  C ++  + QE   YVKAFFVG  K++TAK+EKEA EA L   KMQV+AT+ AENAKK
Subjt:  SVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGATAAGAGCTTCAACGCCGCCGCCGCCGCCGCCGCCGCAAGACGAGGGAGCAGGGAGGTTTTCTGGCTCGAAGGAAGAAGCGTCGGTGATGGATCGCGTTAA
GAAGGGGTGCAGGGCCGTTTATGCGTCTTCTCAAGAGGCACTGCGTTATGTGAAAGCTTTTTTCGTTGGCTGGGGGAAGAAGATGACGGCGAAGAGCGAGAAGGAAGCGG
CGGAAGCAGATTTGAAGATGGCTAAAATGCAGGTTGAAGCTACTGAGGCCGCGGAGAACGCCAAGAAGGGAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGATAAGAGCTTCAACGCCGCCGCCGCCGCCGCCGCCGCAAGACGAGGGAGCAGGGAGGTTTTCTGGCTCGAAGGAAGAAGCGTCGGTGATGGATCGCGTTAA
GAAGGGGTGCAGGGCCGTTTATGCGTCTTCTCAAGAGGCACTGCGTTATGTGAAAGCTTTTTTCGTTGGCTGGGGGAAGAAGATGACGGCGAAGAGCGAGAAGGAAGCGG
CGGAAGCAGATTTGAAGATGGCTAAAATGCAGGTTGAAGCTACTGAGGCCGCGGAGAACGCCAAGAAGGGAACTTAATTTGCGTGCATAATATTTTAGAATGGATCATCA
GAAGTTTAGCCCTCCCCCTTGTAACCATTTCTTCTTACCATTTTTCAAATTTTGTATAATTAGTTCTATGATTTATGTATATTTCCCATTTCATCTGTTTGAATTCAATA
TTCGTAAGTTGCGATTTCAAATGAATCTATTCATTCA
Protein sequenceShow/hide protein sequence
MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVGWGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT