; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G001880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G001880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationCmo_Chr12:1229403..1231503
RNA-Seq ExpressionCmoCh12G001880
SyntenyCmoCh12G001880
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585370.1 EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-5499.12Show/hide
Query:  MEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP
        MEDRKVEEQ STAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP
Subjt:  MEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP

Query:  ISWKCKCGNFIFNP
        ISWKCKCGNFIFNP
Subjt:  ISWKCKCGNFIFNP

XP_022131875.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]5.8e-3757.06Show/hide
Query:  MGSLQIWHRNK-HLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRM--RRRSQIGSQPPSCRRRCRE
        MGSLQ WHRNK H+SI  L  LSV +F+ + S+AE                  GRG  TPLME RKVE   S  EL       RSQIGS+PPSCRRRCRE
Subjt:  MGSLQIWHRNK-HLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRM--RRRSQIGSQPPSCRRRCRE

Query:  CGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        CGG CEAIQVPVA+HDS   ++++R+     SHF + A++S+ +S +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  CGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

XP_022951797.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]5.8e-7789.66Show/hide
Query:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
        MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE                  GRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
Subjt:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG

Query:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

XP_023002540.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]1.6e-7185.63Show/hide
Query:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
        MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE                  GRGFQTPLMEDRKVEEQPSTAELVRM RRSQIGSQPPSCRRRCRECGG
Subjt:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG

Query:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        PCEA+QVPVAVHDS+H+KQRRRTRRRIRSHFSSEA   SSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

XP_023538508.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]9.5e-7286.44Show/hide
Query:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
        MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTS+AE                  GRGFQTPLMEDRKVEEQPSTAELVRM RRSQIGSQPPSCRRRCRECGG
Subjt:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG

Query:  PCEAIQVPVAVHDSTHQKQRRRT-RRRIRSHFSSEA--SSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        PCEA+QVPVAVHDSTHQKQRRRT RRRIRSHFSSEA  SSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  PCEAIQVPVAVHDSTHQKQRRRT-RRRIRSHFSSEA--SSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0LPQ0 Epidermal patterning factor-like protein1.3e-3453.98Show/hide
Query:  MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCREC
        MGS QIWH  RNKH+SI  L FLSVF+ I +TSI                    GRG Q    E +  E      E + M  R+QIGS+PPSCRR+CREC
Subjt:  MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCREC

Query:  GGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        GG CEA+QVPVA+HDS   +++ R +RR  S +       S +SKH+ VALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  GGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

A0A1S3BBM2 Epidermal patterning factor-like protein1.9e-3354.95Show/hide
Query:  MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTA-----ELVRMRRRSQIGSQPPSCRR
        MGS QIWH  RNKH+SI  L FLSVF+ I +TSI                    GRG Q  +  +RK  E  + A     E + M  R+QIGS+PPSCRR
Subjt:  MGSLQIWH--RNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTA-----ELVRMRRRSQIGSQPPSCRR

Query:  RCRECGGPCEAIQVPVAVHDST-HQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        +C ECGG CEA+QVPVA+HDS  +QK+ RR RR  R +FS         SKH+ VALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  RCRECGGPCEAIQVPVAVHDST-HQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1BQW9 Epidermal patterning factor-like protein2.8e-3757.06Show/hide
Query:  MGSLQIWHRNK-HLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRM--RRRSQIGSQPPSCRRRCRE
        MGSLQ WHRNK H+SI  L  LSV +F+ + S+AE                  GRG  TPLME RKVE   S  EL       RSQIGS+PPSCRRRCRE
Subjt:  MGSLQIWHRNK-HLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRM--RRRSQIGSQPPSCRRRCRE

Query:  CGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        CGG CEAIQVPVA+HDS   ++++R+     SHF + A++S+ +S +  +ALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  CGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1GIN2 Epidermal patterning factor-like protein2.8e-7789.66Show/hide
Query:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
        MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE                  GRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
Subjt:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG

Query:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

A0A6J1KP85 Epidermal patterning factor-like protein7.9e-7285.63Show/hide
Query:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG
        MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAE                  GRGFQTPLMEDRKVEEQPSTAELVRM RRSQIGSQPPSCRRRCRECGG
Subjt:  MGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVRMRRRSQIGSQPPSCRRRCRECGG

Query:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
        PCEA+QVPVAVHDS+H+KQRRRTRRRIRSHFSSEA   SSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP
Subjt:  PCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP

SwissProt top hitse value%identityAlignment
Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 19.4e-0630.84Show/hide
Query:  EQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKC
        + P + ++  +  ++++GS PPSC  RC  C  PC AIQVP                   RS F+     S    +      +  D+ SNYKP+ WKC C
Subjt:  EQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKC

Query:  GNFIFNP
            +NP
Subjt:  GNFIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 21.0e-1243.86Show/hide
Query:  EDRKVEEQPSTAELVRMRRRSQIGSQPPSCRR-RCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP
        E   VE   S  + V+M  R  IGS+PP C R RCR C G CEAIQVP       H               S   +SSSSSS+   +  +  D+++NYKP
Subjt:  EDRKVEEQPSTAELVRMRRRSQIGSQPPSCRR-RCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP

Query:  ISWKCKCGNFIFNP
        +SWKCKCGN I+NP
Subjt:  ISWKCKCGNFIFNP

Arabidopsis top hitse value%identityAlignment
AT4G37810.1 unknown protein7.4e-1443.86Show/hide
Query:  EDRKVEEQPSTAELVRMRRRSQIGSQPPSCRR-RCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP
        E   VE   S  + V+M  R  IGS+PP C R RCR C G CEAIQVP       H               S   +SSSSSS+   +  +  D+++NYKP
Subjt:  EDRKVEEQPSTAELVRMRRRSQIGSQPPSCRR-RCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKP

Query:  ISWKCKCGNFIFNP
        +SWKCKCGN I+NP
Subjt:  ISWKCKCGNFIFNP

AT5G10310.1 unknown protein6.7e-0730.84Show/hide
Query:  EQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKC
        + P + ++  +  ++++GS PPSC  RC  C  PC AIQVP                   RS F+     S    +      +  D+ SNYKP+ WKC C
Subjt:  EQPSTAELVRMRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKC

Query:  GNFIFNP
            +NP
Subjt:  GNFIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGAAAATACACTGAAACCCCTCCCCGAGAAGATCTCGAGGCTAATTCTTCACAAAAACGAGTTCGAAAAGAGAGAGTAAAGGTCTCTAAAAGGATGGGCAGCCT
TCAAATTTGGCACAGAAACAAACACCTTTCAATTCCCTTCCTCTTCTTCCTCTCTGTTTTCCTCTTCATTCATCTTACGTCCATAGCTGAAGGTAACCCATTCACTCTAT
TCTACACATTACACTTCAGTACATTTGTTCACATAGGCAGAGGTTTCCAGACGCCATTAATGGAGGACAGGAAGGTGGAGGAACAACCCAGCACGGCGGAGCTGGTGAGG
ATGAGGAGGAGGAGTCAGATAGGGTCACAGCCGCCAAGCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACCATGTGAGGCAATTCAAGTACCAGTAGCAGTACATGATTC
AACACATCAGAAACAGAGGAGAAGAACAAGAAGAAGAATAAGAAGCCATTTCTCTAGTGAAGCTTCTTCTTCTTCTTCTTCTTCTAAACATAATAAGGTGGCTCTGTCTA
GTGAAGATGAAACCTCAAATTACAAACCCATAAGCTGGAAATGCAAATGTGGGAATTTCATCTTCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGAAAATACACTGAAACCCCTCCCCGAGAAGATCTCGAGGCTAATTCTTCACAAAAACGAGTTCGAAAAGAGAGAGTAAAGGTCTCTAAAAGGATGGGCAGCCT
TCAAATTTGGCACAGAAACAAACACCTTTCAATTCCCTTCCTCTTCTTCCTCTCTGTTTTCCTCTTCATTCATCTTACGTCCATAGCTGAAGGTAACCCATTCACTCTAT
TCTACACATTACACTTCAGTACATTTGTTCACATAGGCAGAGGTTTCCAGACGCCATTAATGGAGGACAGGAAGGTGGAGGAACAACCCAGCACGGCGGAGCTGGTGAGG
ATGAGGAGGAGGAGTCAGATAGGGTCACAGCCGCCAAGCTGCCGGAGAAGGTGCAGGGAATGCGGCGGACCATGTGAGGCAATTCAAGTACCAGTAGCAGTACATGATTC
AACACATCAGAAACAGAGGAGAAGAACAAGAAGAAGAATAAGAAGCCATTTCTCTAGTGAAGCTTCTTCTTCTTCTTCTTCTTCTAAACATAATAAGGTGGCTCTGTCTA
GTGAAGATGAAACCTCAAATTACAAACCCATAAGCTGGAAATGCAAATGTGGGAATTTCATCTTCAACCCATGA
Protein sequenceShow/hide protein sequence
MVGKYTETPPREDLEANSSQKRVRKERVKVSKRMGSLQIWHRNKHLSIPFLFFLSVFLFIHLTSIAEGNPFTLFYTLHFSTFVHIGRGFQTPLMEDRKVEEQPSTAELVR
MRRRSQIGSQPPSCRRRCRECGGPCEAIQVPVAVHDSTHQKQRRRTRRRIRSHFSSEASSSSSSSKHNKVALSSEDETSNYKPISWKCKCGNFIFNP