; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G002470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G002470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationCmo_Chr12:1615065..1617165
RNA-Seq ExpressionCmoCh12G002470
SyntenyCmoCh12G002470
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-9998.93Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-9998.93Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLCWNARVWLPSSICLRSWNWNSISFSSASMSESGES+SVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]2.0e-100100Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

XP_022951521.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita moschata]2.0e-100100Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]1.0e-9697.86Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLC NARVWLPSSICL SWNWNSISFSSASMSES ESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase9.5e-101100Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase9.5e-101100Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

A0A6J1K304 Aminoacyl-tRNA hydrolase2.0e-7481.48Show/hide
Query:  MASVISASRFTFSISNSLRL--CWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFTFSIS S +L  C  +RVW  SS+ LRS N NS  FSSASMSES ESNS  P DD     E+AADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MASVISASRFTFSISNSLRL--CWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        CHASVSAIWLNKDDP TSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLK NSI HKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  CHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase4.9e-9797.86Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLC NARVWLPSSICL SWNWNSISFSSASMSES ESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

A0A6J1KTS0 Aminoacyl-tRNA hydrolase4.9e-9797.86Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSISNS RLC NARVWLPSSICL SWNWNSISFSSASMSES ESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD11.7e-2548.72Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKL
        +PYPK  VS + KK +L
Subjt:  KPYPKSVVSPFFKKLKL

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD11.4e-2751.28Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y   + ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKL
        +PYPK  VS + KK +L
Subjt:  KPYPKSVVSPFFKKLKL

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD14.8e-2548.72Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   Q +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLAS

Query:  KPYPKSVVSPFFKKLKL
        +PYPK  V  + KK +L
Subjt:  KPYPKSVVSPFFKKLKL

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein2.1e-5259.57Show/hide
Query:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMS-ESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGC
        MA+ + ++ F F I          R+    S  +R  ++   + +S SMS ++GE ++V+      + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGC
Subjt:  MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMS-ESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGC

Query:  HASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL
        HASV+AIW  KDDP T +YC PQ+IDSMHKVTLEVKGETQ++NLSEKLK   I HKLW+EQPENIPTC+A+KPYPKS VS FFKKLKL
Subjt:  HASVSAIWLNKDDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGGTAATTTCAGCATCTCGATTTACATTCTCCATTTCGAATTCCTTGAGGCTCTGTTGGAACGCTAGGGTTTGGCTACCTTCTTCAATTTGTCTCCGCTCTTG
GAATTGGAATTCCATTTCGTTTAGCTCGGCTTCTATGAGTGAATCTGGTGAAAGTAATTCTGTTCTTCCACTGGACGACGGCGGAGCGAAGGCGGAGGAGGCCGCCGATG
TTTTGGTTCAGTACGTGGTGCTACGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTTGTGACTCAGGGATGCCATGCTTCAGTCTCCGCCATTTGGTTGAATAAA
GACGATCCTCACACTTCGGAGTACTGTAGTCCCCAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGGTAGAACAGCCAGAGAACATTCCAACATGTCTTGCCTCAAAGCCCTACCCCAAATCAGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGGTAATTTCAGCATCTCGATTTACATTCTCCATTTCGAATTCCTTGAGGCTCTGTTGGAACGCTAGGGTTTGGCTACCTTCTTCAATTTGTCTCCGCTCTTG
GAATTGGAATTCCATTTCGTTTAGCTCGGCTTCTATGAGTGAATCTGGTGAAAGTAATTCTGTTCTTCCACTGGACGACGGCGGAGCGAAGGCGGAGGAGGCCGCCGATG
TTTTGGTTCAGTACGTGGTGCTACGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTTGTGACTCAGGGATGCCATGCTTCAGTCTCCGCCATTTGGTTGAATAAA
GACGATCCTCACACTTCGGAGTACTGTAGTCCCCAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAGAAACT
TAAAGCAAATTCAATCGTCCATAAACTGTGGGTAGAACAGCCAGAGAACATTCCAACATGTCTTGCCTCAAAGCCCTACCCCAAATCAGTTGTATCACCATTTTTTAAAA
AGCTGAAACTCTAACTGCAATCTATTTCTATAGAGATCATGCAGCATACACAGTAGTTCGTAATCATAAAAGAGACGTGGAGAAAGGTCAAAATTCTCTAGCAATCTCAA
GCTGTTGCAATTGAACTTGCGTTTACTTTTCCAGTAGAGAGGGAGGAAACAGAACCTCCATTTGGTTTCTACGTCGGTGGCCTGGATCGTGCCTCCGCAGTAGGGACATG
CCCCCGGAGCTGGCTGCCTCGACAGGATCCTCTGGTCCTCATCGCACACAAACACCAAACACATCTCTTCTTCTCCTTTGTGTTCTTGCTTTCTGATCCCCTGCTTTTGG
GTCTTGGGTGAAAAGTCCGGTTGGGAAATTAGTGGTGGACTTCGAAGATCAGAGAGATGGATTTATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGA
Protein sequenceShow/hide protein sequence
MASVISASRFTFSISNSLRLCWNARVWLPSSICLRSWNWNSISFSSASMSESGESNSVLPLDDGGAKAEEAADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNK
DDPHTSEYCSPQNIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWVEQPENIPTCLASKPYPKSVVSPFFKKLKL