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CmoCh12G002480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G002480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMethionyl-tRNA synthetase
Genome locationCmo_Chr12:1615238..1615702
RNA-Seq ExpressionCmoCh12G002480
SyntenyCmoCh12G002480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445081.1 PREDICTED: uncharacterized protein LOC103488227 [Cucumis melo]3.2e-2781.54Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCF+PLYWK+KRKF C  C R+LVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

XP_022951522.1 uncharacterized protein LOC111454313 [Cucurbita moschata]2.3e-33100Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

XP_022962063.1 uncharacterized protein LOC111462635 [Cucurbita moschata]4.2e-2781.54Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCFLPLYWK+KRKF C  C R+LV+
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

XP_023002566.1 uncharacterized protein LOC111496375 [Cucurbita maxima]2.4e-3092.31Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQRILSRQPAPGACPYC GTIQATDVETKWRFCFLPLYWK+KRKFNC SC R+LVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

XP_038884125.1 uncharacterized protein LOC120075047 [Benincasa hispida]1.4e-2783.08Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCFLPLYWK+KRKF C  C R+LVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

TrEMBL top hitse value%identityAlignment
A0A1S3BCK8 uncharacterized protein LOC1034882271.6e-2781.54Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCF+PLYWK+KRKF C  C R+LVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

A0A6J1GHX0 uncharacterized protein LOC1114543131.1e-33100Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

A0A6J1HDM3 uncharacterized protein LOC1114626352.0e-2781.54Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCFLPLYWK+KRKF C  C R+LV+
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

A0A6J1KC13 uncharacterized protein LOC1114919252.0e-2781.54Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQR+LSRQPAPGACP+CGG IQATDVE++WRFCFLPLYWK+KRKF C  C R+LV+
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

A0A6J1KLN0 uncharacterized protein LOC1114963751.1e-3092.31Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM
        MCLVFVCDEDQRILSRQPAPGACPYC GTIQATDVETKWRFCFLPLYWK+KRKFNC SC R+LVM
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52855.1 unknown protein1.0e-1036.51Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNREL
        +C  F+ D+ +++   +PA G C  CG      D++T  RFCF+P+YW+S R   C+ C   L
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNREL

AT4G29905.1 unknown protein1.1e-2059.09Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH
        MCL  V  E++  L RQ APG CPYCGG + A D+ETKW FCFLPL +K KRK++C+SC R LV++
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH

AT5G10695.1 unknown protein1.8e-2359.09Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH
        MCLVFVCD+D+R++ R  APGACPYCGG +Q  DV ++WRFCF+PL  KSKR+  C++C + L++H
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH

AT5G10695.2 unknown protein2.3e-0736.36Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH
        MCLVFVCD+D+R++                         RFCF+PL  KSKR+  C++C + L++H
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH

AT5G57123.1 unknown protein1.5e-2260.61Show/hide
Query:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH
        MCLV +CDE++  L RQ APG+CPYCGG +Q  DVE KW FCF+PL +K KRK++C+SC+R LV++
Subjt:  MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTGGTGTTTGTGTGCGATGAGGACCAGAGGATCCTGTCGAGGCAGCCAGCTCCGGGGGCATGTCCCTACTGCGGAGGCACGATCCAGGCCACCGACGTAGAAAC
CAAATGGAGGTTCTGTTTCCTCCCTCTCTACTGGAAAAGTAAACGCAAGTTCAATTGCAACAGCTGCAACAGAGAGCTTGTTATGCATTCTGGATTCAAAACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTGGTGTTTGTGTGCGATGAGGACCAGAGGATCCTGTCGAGGCAGCCAGCTCCGGGGGCATGTCCCTACTGCGGAGGCACGATCCAGGCCACCGACGTAGAAAC
CAAATGGAGGTTCTGTTTCCTCCCTCTCTACTGGAAAAGTAAACGCAAGTTCAATTGCAACAGCTGCAACAGAGAGCTTGTTATGCATTCTGGATTCAAAACGTAG
Protein sequenceShow/hide protein sequence
MCLVFVCDEDQRILSRQPAPGACPYCGGTIQATDVETKWRFCFLPLYWKSKRKFNCNSCNRELVMHSGFKT