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CmoCh12G002600 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G002600
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiongibberellin 3-beta-dioxygenase 1-like
Genome locationCmo_Chr12:1685583..1690306
RNA-Seq ExpressionCmoCh12G002600
SyntenyCmoCh12G002600
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
GO:0051213 - dioxygenase activity (molecular function)
InterPro domainsIPR005123 - Oxoglutarate/iron-dependent dioxygenase
IPR027443 - Isopenicillin N synthase-like superfamily
IPR044861 - Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585440.1 Gibberellin 3-beta-dioxygenase 1, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5096.19Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSSMDDS KSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRF+SILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

XP_022951873.1 gibberellin 3-beta-dioxygenase 1-like [Cucurbita moschata]5.7e-5298.1Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

XP_023002882.1 gibberellin 3-beta-dioxygenase 1-like [Cucurbita maxima]3.8e-4892.38Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSS  DSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQ CNDGLQIFKD+A WVPLSPMRGSFVVNVGDLLHIMSNGRF SILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

XP_023522671.1 gibberellin 3-beta-dioxygenase 1-like, partial [Cucurbita pepo subsp. pepo]7.5e-5297.14Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGW+PLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

XP_023537854.1 gibberellin 3-beta-dioxygenase 1-like [Cucurbita pepo subsp. pepo]7.5e-5297.14Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGW+PLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

TrEMBL top hitse value%identityAlignment
A0A6J1BSK2 gibberellin 3-beta-dioxygenase 1-like isoform X11.0e-3877.23Show/hide
Query:  KLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGK
        KL  S +D G+ YTAL+LNSYPPCPDP QVMGLAAHTDTSLFTI+HQA  DGLQ+FKD+ GW+PLSPM G+ VVN+GDLLHI+SNGRFRSILHRV IQGK
Subjt:  KLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGK

Query:  K
        +
Subjt:  K

A0A6J1BUZ4 gibberellin 3-beta-dioxygenase 1-like isoform X21.0e-3877.23Show/hide
Query:  KLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGK
        KL  S +D G+ YTAL+LNSYPPCPDP QVMGLAAHTDTSLFTI+HQA  DGLQ+FKD+ GW+PLSPM G+ VVN+GDLLHI+SNGRFRSILHRV IQGK
Subjt:  KLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGK

Query:  K
        +
Subjt:  K

A0A6J1GIY0 gibberellin 3-beta-dioxygenase 1-like2.8e-5298.1Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

A0A6J1KKU0 gibberellin 3-beta-dioxygenase 1-like1.9e-4892.38Show/hide
Query:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG
        MKLLSS  DSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQ CNDGLQIFKD+A WVPLSPMRGSFVVNVGDLLHIMSNGRF SILHRVTIQG
Subjt:  MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQG

Query:  KKEER
        KK  R
Subjt:  KKEER

Q9LM06 Putative gibberellin 3 beta hydroxylase6.6e-3875.47Show/hide
Query:  MKLLSSMDDS-GKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQ
        MKLL+S D+S GK Y AL+LNSYPPCPDP +VMGLAAHTDTSLFTIVHQA +DGLQ+FKD  GWVPLSPM G+ +VNVGD+LHI+SNGRF SILHRV I 
Subjt:  MKLLSSMDDS-GKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQ

Query:  GKKEER
          KE R
Subjt:  GKKEER

SwissProt top hitse value%identityAlignment
O24648 Gibberellin 3-beta-dioxygenase 18.9e-2452.17Show/hide
Query:  KSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKE
        K+  ALQLNSYP CPDPD  MGLA HTD++  TI+ Q    GLQ+ ++ +GW+ + P++G  VVNVGDL HI+SNG + S+LHRV +   ++
Subjt:  KSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKE

Q39103 Gibberellin 3-beta-dioxygenase 11.6e-2556.38Show/hide
Query:  SSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        S   D   +  ALQLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GWV + P  GS VVNVGDL HI+SNG F+S+LHR  +
Subjt:  SSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI

Q39224 Protein SRG13.0e-1944.55Show/hide
Query:  LSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKK
        L  + D   S  ++++N YPPCP PDQV+GL  H+D+   T++ Q  + +GLQI KD   WVP+ P+  +F+VN+GD+L I++NG +RSI HR  +  +K
Subjt:  LSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKK

Query:  E
        E
Subjt:  E

Q9C971 Gibberellin 3-beta-dioxygenase 42.6e-2351.81Show/hide
Query:  ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        A++LN YP CP+P++ MGLAAHTD+++ TI+HQ+   GLQ+F++++GWV + P  G  VVN+GDL HI+SNG+  S++HR  +
Subjt:  ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI

Q9ZT84 Gibberellin 3-beta-dioxygenase 22.4e-2459.76Show/hide
Query:  LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        +QLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GWV   P+ GS VVNVGDLLHI++NG F S+LHR  +
Subjt:  LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI

Arabidopsis top hitse value%identityAlignment
AT1G15550.1 gibberellin 3-oxidase 11.2e-2656.38Show/hide
Query:  SSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        S   D   +  ALQLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GWV + P  GS VVNVGDL HI+SNG F+S+LHR  +
Subjt:  SSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI

AT1G17020.1 senescence-related gene 12.1e-2044.55Show/hide
Query:  LSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKK
        L  + D   S  ++++N YPPCP PDQV+GL  H+D+   T++ Q  + +GLQI KD   WVP+ P+  +F+VN+GD+L I++NG +RSI HR  +  +K
Subjt:  LSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKK

Query:  E
        E
Subjt:  E

AT1G78550.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein2.8e-2049.45Show/hide
Query:  YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKE
        + ++++N YPPCP PDQVMGL  H+D +  TI+ Q    +GLQI KD   WV + P+R + VVNVG++L I++NGR+RSI HR  +  +KE
Subjt:  YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKE

AT1G80330.1 gibberellin 3-oxidase 41.8e-2451.81Show/hide
Query:  ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        A++LN YP CP+P++ MGLAAHTD+++ TI+HQ+   GLQ+F++++GWV + P  G  VVN+GDL HI+SNG+  S++HR  +
Subjt:  ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI

AT1G80340.1 gibberellin 3-oxidase 21.7e-2559.76Show/hide
Query:  LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI
        +QLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GWV   P+ GS VVNVGDLLHI++NG F S+LHR  +
Subjt:  LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGTTGTCTTCAATGGACGACTCGGGTAAGTCCTACACCGCCCTCCAACTGAACTCGTATCCACCGTGCCCTGATCCAGACCAGGTCATGGGCCTTGCCGCCCA
CACCGACACCTCCCTCTTCACCATCGTTCACCAGGCATGCAATGATGGCCTCCAAATCTTCAAAGACAAAGCAGGCTGGGTTCCATTGTCTCCGATGAGAGGTTCTTTCG
TTGTCAACGTTGGCGATCTTCTCCACATTATGTCGAATGGGCGGTTTCGGAGCATTCTTCATCGGGTTACGATACAAGGAAAGAAGGAAGAGAGGCGACATCAAATTGAT
TATCCACACCTGTTATGGTCTGATGCACCAGAAAATGCCGGAATCCAGATTATCCGACGAAGAAATCATGGAATTCCGAGCATTGACGAAACCGATCGAACAGCAAAAGG
TTCGACATCGCCGGGAAACGTAACTCCGATTAGCAGCTCATTTTCAATGAATTGCGTAGAAGAGAAACCGGTTCTTCCCGTGCATCTCCGCGCTGCGGCCTTCCGGACAA
AGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGTTGTCTTCAATGGACGACTCGGGTAAGTCCTACACCGCCCTCCAACTGAACTCGTATCCACCGTGCCCTGATCCAGACCAGGTCATGGGCCTTGCCGCCCA
CACCGACACCTCCCTCTTCACCATCGTTCACCAGGCATGCAATGATGGCCTCCAAATCTTCAAAGACAAAGCAGGCTGGGTTCCATTGTCTCCGATGAGAGGTTCTTTCG
TTGTCAACGTTGGCGATCTTCTCCACATTATGTCGAATGGGCGGTTTCGGAGCATTCTTCATCGGGTTACGATACAAGGAAAGAAGGAAGAGAGGCGACATCAAATTGAT
TATCCACACCTGTTATGGTCTGATGCACCAGAAAATGCCGGAATCCAGATTATCCGACGAAGAAATCATGGAATTCCGAGCATTGACGAAACCGATCGAACAGCAAAAGG
TTCGACATCGCCGGGAAACGTAACTCCGATTAGCAGCTCATTTTCAATGAATTGCGTAGAAGAGAAACCGGTTCTTCCCGTGCATCTCCGCGCTGCGGCCTTCCGGACAA
AGTGA
Protein sequenceShow/hide protein sequence
MKLLSSMDDSGKSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKEERRHQID
YPHLLWSDAPENAGIQIIRRRNHGIPSIDETDRTAKGSTSPGNVTPISSSFSMNCVEEKPVLPVHLRAAAFRTK