; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G002860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G002860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAT-rich interactive domain-containing protein
Genome locationCmo_Chr12:1814981..1819264
RNA-Seq ExpressionCmoCh12G002860
SyntenyCmoCh12G002860
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585468.1 hypothetical protein SDJN03_18201, partial [Cucurbita argyrosperma subsp. sororia]5.6e-11497.6Show/hide
Query:  KISTFPRHKGSCSWAIGEESTSNSYDFTTCRLNGIDVSASLHRDLVLFFGWRRVNSSNERRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFA
        K  TFPRH+GSCSW IG+ESTSNSYDFTTCRLNGIDVSASLHRDLVLFFGWRRVNSSNERRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFA
Subjt:  KISTFPRHKGSCSWAIGEESTSNSYDFTTCRLNGIDVSASLHRDLVLFFGWRRVNSSNERRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFA

Query:  SSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDV
        SSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDV
Subjt:  SSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDV

Query:  WEQEGLYD
        WEQEGLYD
Subjt:  WEQEGLYD

KAG7020386.1 hypothetical protein SDJN02_17070 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-79100Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

XP_022951409.1 uncharacterized protein LOC111454240 isoform X1 [Cucurbita moschata]3.4e-79100Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

XP_023002499.1 uncharacterized protein LOC111496323 isoform X1 [Cucurbita maxima]2.2e-7898.66Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDGPSTGLRV+DQEAKKQCLP+NFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

XP_023537962.1 uncharacterized protein LOC111798846 [Cucurbita pepo subsp. pepo]2.1e-7697.32Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDG STGLRVEDQEAKKQCLPENFASSS CEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTS+S
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QK+VREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

TrEMBL top hitse value%identityAlignment
A0A1S3BC47 uncharacterized protein LOC103488310 isoform X12.7e-6685.23Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        +R   G C+  ALG+AMDGPS GLRV+D+EAKKQCLPENF SSSTCEMDNSTVWSQRSMASAQSHDS +N+GSST+FVNSGLLLWNETRKQWVGNK S+S
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QK+V+EPKISWNATYDSLLTTNKPFPEAIPL EMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

A0A6J1GHI7 uncharacterized protein LOC111454240 isoform X23.5e-69100Show/hide
Query:  MDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD
        MDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD
Subjt:  MDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD

Query:  SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

A0A6J1GIP5 uncharacterized protein LOC111454240 isoform X11.7e-79100Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

A0A6J1KLH1 uncharacterized protein LOC111496323 isoform X22.2e-6898.5Show/hide
Query:  MDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD
        MDGPSTGLRV+DQEAKKQCLP+NFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD
Subjt:  MDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNATYD

Query:  SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  SLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

A0A6J1KQM2 uncharacterized protein LOC111496323 isoform X11.1e-7898.66Show/hide
Query:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
        RRSCRGRCTGPALGDAMDGPSTGLRV+DQEAKKQCLP+NFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES
Subjt:  RRSCRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein2.7e-2649.28Show/hide
Query:  DGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASA-QSHDSHN---NVGSSTEFVNSGLLLWNETRKQWVG-NKTSESQKRVREPKISWN
        D PS  +    +  KK  + E+F S+ST +MDN T  SQ S++S+ Q+ DS +   N  +  E+VN GLLLWN+TR++WVG +K +      +  K++WN
Subjt:  DGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASA-QSHDSHN---NVGSSTEFVNSGLLLWNETRKQWVG-NKTSESQKRVREPKISWN

Query:  -ATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
         ATYDSLL +NK FP+ IPL EM++FLVD+WEQEGLYD
Subjt:  -ATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

AT1G15350.2 unknown protein2.7e-2649.28Show/hide
Query:  DGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASA-QSHDSHN---NVGSSTEFVNSGLLLWNETRKQWVG-NKTSESQKRVREPKISWN
        D PS  +    +  KK  + E+F S+ST +MDN T  SQ S++S+ Q+ DS +   N  +  E+VN GLLLWN+TR++WVG +K +      +  K++WN
Subjt:  DGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASA-QSHDSHN---NVGSSTEFVNSGLLLWNETRKQWVG-NKTSESQKRVREPKISWN

Query:  -ATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
         ATYDSLL +NK FP+ IPL EM++FLVD+WEQEGLYD
Subjt:  -ATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

AT4G32342.1 unknown protein1.0e-2849.68Show/hide
Query:  VNSSNERRSCRGRCTGP-ALGDAMDGPSTGLRVEDQEAKK-QCLPENFASSSTCEMD-NSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQ
        +NS N    C G C     L   +D PS GL+++ +  KK     ++F S+STC+MD N T+ SQ   +S    D   +  +STEFVN GL+LWN TR+Q
Subjt:  VNSSNERRSCRGRCTGP-ALGDAMDGPSTGLRVEDQEAKK-QCLPENFASSSTCEMD-NSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQ

Query:  WVGNKTSESQKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLY
        W    T + Q  V EP ISWN+TYDSLL+TNK FP+ IPL EM+ FLVDVWE+EGLY
Subjt:  WVGNKTSESQKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLY

AT5G25360.1 unknown protein3.3e-4057.05Show/hide
Query:  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSS---TEFVNSGLLLWNETRKQWVGNKTSES
        C G C  P L  A+D PS GLR++ +  KK  + E+F S+STCEMDNST+ SQRSM+S    ++ +   S+   TEFVN GL LWN+TR+QW+ N TS+ 
Subjt:  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSS---TEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        + +VREP ISWNATY+SLL  NK F   IPL EM++FLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD

AT5G25360.2 unknown protein3.3e-4057.05Show/hide
Query:  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSS---TEFVNSGLLLWNETRKQWVGNKTSES
        C G C  P L  A+D PS GLR++ +  KK  + E+F S+STCEMDNST+ SQRSM+S    ++ +   S+   TEFVN GL LWN+TR+QW+ N TS+ 
Subjt:  CRGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSS---TEFVNSGLLLWNETRKQWVGNKTSES

Query:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD
        + +VREP ISWNATY+SLL  NK F   IPL EM++FLVDVWEQEGLYD
Subjt:  QKRVREPKISWNATYDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCGAGTGGCTCCTAGCACCAGCATATTGGCACCAGAGACCAAAGACTGCGTCCAGTTCACGAACCAGCTCGCTCAACACCTTCAATGGCGATCTTCCTGGTTG
TAGGCCGCCACGAATCGGTTGCGGCGCCGCCAAAATCTCAACTTTTCCCCGACACAAAGGCTCGTGTTCTTGGGCAATTGGTGAAGAATCTACCTCCAATTCTTACGACT
TTACGACATGTCGGCTGAACGGGATTGACGTGTCGGCCTCTCTCCACCGCGATTTAGTGCTTTTCTTTGGCTGGAGACGCGTAAATAGCTCGAATGAGAGAAGAAGCTGT
CGTGGACGCTGCACTGGACCTGCATTAGGTGATGCAATGGACGGGCCGTCTACTGGTCTGAGAGTCGAAGACCAAGAAGCTAAGAAACAATGCTTACCCGAAAATTTCGC
AAGCTCTAGCACGTGTGAAATGGACAACAGTACAGTTTGGTCTCAAAGGAGCATGGCATCAGCTCAGTCGCATGATTCCCATAACAATGTTGGGAGCAGTACAGAGTTTG
TAAATTCTGGACTACTTCTTTGGAACGAAACCCGGAAGCAATGGGTCGGAAATAAAACGTCCGAGAGCCAAAAGCGAGTTCGAGAACCCAAAATAAGTTGGAATGCTACT
TACGACAGCTTACTTACGACGAACAAACCATTCCCGGAGGCCATACCTCTAGCTGAGATGATAGAGTTTCTTGTTGATGTCTGGGAGCAGGAGGGCCTGTATGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCCGAGTGGCTCCTAGCACCAGCATATTGGCACCAGAGACCAAAGACTGCGTCCAGTTCACGAACCAGCTCGCTCAACACCTTCAATGGCGATCTTCCTGGTTG
TAGGCCGCCACGAATCGGTTGCGGCGCCGCCAAAATCTCAACTTTTCCCCGACACAAAGGCTCGTGTTCTTGGGCAATTGGTGAAGAATCTACCTCCAATTCTTACGACT
TTACGACATGTCGGCTGAACGGGATTGACGTGTCGGCCTCTCTCCACCGCGATTTAGTGCTTTTCTTTGGCTGGAGACGCGTAAATAGCTCGAATGAGAGAAGAAGCTGT
CGTGGACGCTGCACTGGACCTGCATTAGGTGATGCAATGGACGGGCCGTCTACTGGTCTGAGAGTCGAAGACCAAGAAGCTAAGAAACAATGCTTACCCGAAAATTTCGC
AAGCTCTAGCACGTGTGAAATGGACAACAGTACAGTTTGGTCTCAAAGGAGCATGGCATCAGCTCAGTCGCATGATTCCCATAACAATGTTGGGAGCAGTACAGAGTTTG
TAAATTCTGGACTACTTCTTTGGAACGAAACCCGGAAGCAATGGGTCGGAAATAAAACGTCCGAGAGCCAAAAGCGAGTTCGAGAACCCAAAATAAGTTGGAATGCTACT
TACGACAGCTTACTTACGACGAACAAACCATTCCCGGAGGCCATACCTCTAGCTGAGATGATAGAGTTTCTTGTTGATGTCTGGGAGCAGGAGGGCCTGTATGACTGAGC
CTGCTATTCAAGGGAGTCTCCTATTGCTTAAACTCATGCAGCTCGATTTTTTTCGCTGCCGACCCATATCGTCGATCATGAACAATCGCTCACTGCTTATACTATACGAA
TGTTAGTGTTTATGTTGAATTTGAGCTACTCGTTATGGGATCGTTTTGAAGGTATAGTTTTTTATGTCGAACTTCTGCTACAACTTTTAAAGGAACAAAAACTTTATAGT
TTAAACGTCTTGACTAAACCGTTAGAGGTTC
Protein sequenceShow/hide protein sequence
MSSEWLLAPAYWHQRPKTASSSRTSSLNTFNGDLPGCRPPRIGCGAAKISTFPRHKGSCSWAIGEESTSNSYDFTTCRLNGIDVSASLHRDLVLFFGWRRVNSSNERRSC
RGRCTGPALGDAMDGPSTGLRVEDQEAKKQCLPENFASSSTCEMDNSTVWSQRSMASAQSHDSHNNVGSSTEFVNSGLLLWNETRKQWVGNKTSESQKRVREPKISWNAT
YDSLLTTNKPFPEAIPLAEMIEFLVDVWEQEGLYD