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CmoCh12G003010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionStress induced protein
Genome locationCmo_Chr12:1885816..1886298
RNA-Seq ExpressionCmoCh12G003010
SyntenyCmoCh12G003010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585486.1 hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sororia]1.8e-7397.32Show/hide
Query:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSF
        +S SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFG RLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSF
Subjt:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSF

Query:  INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMG
        INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMG
Subjt:  INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMG

KAG7020402.1 hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-7696.23Show/hide
Query:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSF
        +S SSSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSSSGGFFGFG RLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSF
Subjt:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSF

Query:  INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM RSEI
Subjt:  INGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

XP_022131993.1 uncharacterized protein LOC111004972 [Momordica charantia]2.2e-4766.67Show/hide
Query:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGPRLSRNS-SVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKW
        MAS+SSS+SSS+IDET R     ++RIEE+ D EVGV SYSS G FFGFG R +R+S  VRCRY+ LQ   ++++V QSWMMKKVKRF+EI+KA+A  KW
Subjt:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGPRLSRNS-SVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKW

Query:  RSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        RSFI+GI++K+RSVRFQYDPRSYALNFD G GEDGGG GRHG+  PS  P+GLGI MNRS++
Subjt:  RSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

XP_023002532.1 uncharacterized protein LOC111496346 [Cucurbita maxima]9.6e-7292.55Show/hide
Query:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTP-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWR
        MAS SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFF FG  LSR+SSVRCRYVSLQ   QNDEEVNQSWMMKKVKRFEEI++AMARSKWR
Subjt:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTP-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWR

Query:  SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Subjt:  SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

XP_023537514.1 uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo]7.6e-7796.79Show/hide
Query:  SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFING
        +SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFFGFG RLSR+SSVRCRYVSLQT QNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFING
Subjt:  SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFING

Query:  IVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        IVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
Subjt:  IVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

TrEMBL top hitse value%identityAlignment
A0A1S3BC68 uncharacterized protein LOC1034883317.8e-3561.59Show/hide
Query:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIVKAMARS
        +S SSSSSSSAID T R E+   +RIEE  DL   EV G SYSS G FFGFG RLSR   VR  Y+ LQ+ +  EEV  QSWMM+KVKR  EI+KAMA  
Subjt:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIVKAMARS

Query:  KWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        KWRS INGI+NKRRSVRFQYDPRSYALNFD G+ E+G           S  P+GLGI MNR++I
Subjt:  KWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

A0A5A7VG87 Stress induced protein7.8e-3561.59Show/hide
Query:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIVKAMARS
        +S SSSSSSSAID T R E+   +RIEE  DL   EV G SYSS G FFGFG RLSR   VR  Y+ LQ+ +  EEV  QSWMM+KVKR  EI+KAMA  
Subjt:  ASFSSSSSSSAIDETFRLEERGSNRIEEESDL---EV-GVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEV-NQSWMMKKVKRFEEIVKAMARS

Query:  KWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        KWRS INGI+NKRRSVRFQYDPRSYALNFD G+ E+G           S  P+GLGI MNR++I
Subjt:  KWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

A0A6J1BV09 uncharacterized protein LOC1110049721.0e-4766.67Show/hide
Query:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGPRLSRNS-SVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKW
        MAS+SSS+SSS+IDET R     ++RIEE+ D EVGV SYSS G FFGFG R +R+S  VRCRY+ LQ   ++++V QSWMMKKVKRF+EI+KA+A  KW
Subjt:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGV-SYSSSGGFFGFGPRLSRNS-SVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKW

Query:  RSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        RSFI+GI++K+RSVRFQYDPRSYALNFD G GEDGGG GRHG+  PS  P+GLGI MNRS++
Subjt:  RSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

A0A6J1K5B0 uncharacterized protein LOC1114924252.3e-4267.33Show/hide
Query:  SSSSSAIDETFRLEE-RGSNRIEEESDL-----EVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRS
        +SS++  DE  R EE R  +RIEE +D      EVGVSYSS G FFGFG RLSR+SSVRCRY+ L   + +EEV QSWMMKKVKRF++I+KAMA  KWRS
Subjt:  SSSSSAIDETFRLEE-RGSNRIEEESDL-----EVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRS

Query:  FINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMG
        FINGIVNKRRSVRFQYDPRSYALNFD G+GE+ GGGGRHG+  P   P+G
Subjt:  FINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMG

A0A6J1KJS5 uncharacterized protein LOC1114963464.7e-7292.55Show/hide
Query:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTP-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWR
        MAS SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFF FG  LSR+SSVRCRYVSLQ   QNDEEVNQSWMMKKVKRFEEI++AMARSKWR
Subjt:  MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTP-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWR

Query:  SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
        SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Subjt:  SFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTTTTTCTTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAACCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGT
TTCGTATTCCTCCAGTGGAGGTTTCTTCGGATTCGGACCGAGGCTATCTCGGAACAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCCGCAGAACGACGAGGAAG
TGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGC
AGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACC
GCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTTTTTCTTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAACCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGT
TTCGTATTCCTCCAGTGGAGGTTTCTTCGGATTCGGACCGAGGCTATCTCGGAACAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCCGCAGAACGACGAGGAAG
TGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGC
AGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACC
GCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA
Protein sequenceShow/hide protein sequence
MASFSSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGPRLSRNSSVRCRYVSLQTPQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRR
SVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI