; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G003130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCmo_Chr12:1933848..1934672
RNA-Seq ExpressionCmoCh12G003130
SyntenyCmoCh12G003130
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-160100Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_022132176.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]5.2e-15093.8Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_022951690.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]2.5e-160100Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_023538244.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo]7.2e-16099.64Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWNHNVEEEFALMREIVD+FNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

XP_038886120.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.3e-14891.97Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWNHN+EEEFAL+REIVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TLK+NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNI  DI+ASDSIELLR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

TrEMBL top hitse value%identityAlignment
A0A0A0LSM4 Poly(A)-specific ribonuclease4.0e-14891.24Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESI+IREVWN N+EEEFAL+R+IVDQFNYIAMDTEFPGVVVRPVG+FKNIN+YNY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNI +DI+ASDSIELLR+CGIDFQK +EEGIDVN FGELLMSSGIVLNDN++WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLI+MYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1BRI8 Poly(A)-specific ribonuclease2.5e-15093.8Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVW+HN+EEEFAL+REIVDQFNYIAMDTEFPGVV+RPVGAFKNIN+YNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNIS DIFASDSIELLRQCGIDF+KNNEEGIDVN F ELLMSSGIVLND V WVTFHSGYDFGYLLKLLTCRSLP TQA FFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE GQ+ N
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1BVW9 Poly(A)-specific ribonuclease1.2e-14791.61Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKG+SI IREVWN N+EEEFAL+REIVD+FNYIAMDTEFPGVV+RPVGAFKNINDYNYQTLKDNVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFN+S DIFASDSIELLRQCGIDF+KNNEEGIDVN FGELLMSSG+VLND V WVTFHSGYDFGYLLKLLTCR+LP TQA FFDLIN+YFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNS HGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGST+KYAGVLYGLGVE+GQ TN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1GJJ8 Poly(A)-specific ribonuclease1.2e-160100Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

A0A6J1KLE0 Poly(A)-specific ribonuclease1.2e-160100Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
        KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN

SwissProt top hitse value%identityAlignment
Q9LEU4 Probable CCR4-associated factor 1 homolog 103.8e-11975Show/hide
Query:  KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TLK+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.8e-9562.12Show/hide
Query:  ESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNIN------DYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        ++I IREVWNHN+E+E AL+ + +D F Y+AMDTEFPG+V + V A  N N      +YNY TLK NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  ESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNIN------DYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIK
        NFREFN+ +D+FA DSIELLR+  ID +KNNE G+D   F ELLM SG+VLND ++WVTFH GYDFGYLLKLL+ + LP   + FFD +  +FP+VYDIK
Subjt:  NFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIK

Query:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL
        +LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  TF K+++ FF GS  KY+G L+GL
Subjt:  HLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 69.0e-12173.8Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Q9SKZ2 Probable CCR4-associated factor 1 homolog 78.1e-12274.26Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y+Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYD
        QFNFREF++ +DI+A+DSIELLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP TQ  FF++I++YFP VYD
Subjt:  QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

Q9UFF9 CCR4-NOT transcription complex subunit 83.8e-7954.34Show/hide
Query:  IREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISND
        I EVW  N+EEE   +REIV  ++YIAMDTEFPGVVVRP+G F++  DY YQ L+ NVD LK+IQLGLTF++E G  P+        WQFNF+ FN++ D
Subjt:  IREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISND

Query:  IFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFH
        +++ DSI+LL   G+ FQK+ EEGID  HF ELLM+SG+VL DNV W++FHSGYDFGY++KLLT   LP  +  FF ++N++FP +YD+K+LMK C +  
Subjt:  IFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFH

Query:  GGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQ--KYAGVLYGLGVETGQTTN
        GGL ++A+ L+++RIG  HQAGSDSLLT   F ++++ FF  S    KY G LYGLG    Q  N
Subjt:  GGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQ--KYAGVLYGLGVETGQTTN

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.4e-12273.8Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.4e-12273.8Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE GQ
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.2e-12173.88Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K +SI IREVWN N++EE  L+R++VD F Y+AMDTEFPG+VVRPVG FK+  DY+Y+TLK NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI
        FNFREF++ +DIFA DSIELL+Q GID  KN  +GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP +Q  FF LIN+YFP VYDI
Subjt:  FNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDI

Query:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE
        KHLMKFCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL++ FF G   KY+GVLYGLGVE
Subjt:  KHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.8e-12374.26Show/hide
Query:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K +SI IREVWN N+E E AL+RE+VD F ++AMDTEFPG+V RPVG FK   +Y+Y+TLK NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYD
        QFNFREF++ +DI+A+DSIELLRQ GIDF KNNE GID   F ELLMSSGIVLN+NV+WVTFHSGYDFGYLLKLLTC++LP TQ  FF++I++YFP VYD
Subjt:  QFNFREFNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYD

Query:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ
        IKHLMKFCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL++ FF GS +KY+GVLYGLGVE GQ
Subjt:  IKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.7e-12075Show/hide
Query:  KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K +SI IREVW++N+ EEFAL+REIVD+F+YIAMDTEFPGVV++PV  FK  ND NY+TLK+NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMK
        FNI  DI+AS+SIELLRQCGIDF+KN E+GIDV  FGEL+MSSGIVLND + WVTFH GYDFGYL+KLLTC+ LP  QA FF L+ +YFP VYDIKHLM 
Subjt:  FNISNDIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMK

Query:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT
        FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL++ +F GST+KY GVLYGLGVE G TT
Subjt:  FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACAT
AGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGT
TGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAAC
GATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTC
ATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGG
CTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAA
ATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATATTGCCGAAAGGTGAGTCGATTCATATCCGTGAGGTGTGGAACCATAACGTGGAGGAAGAGTTCGCTCTAATGCGTGAAATTGTCGACCAATTTAATTACAT
AGCGATGGATACTGAGTTCCCCGGCGTGGTGGTTCGCCCTGTGGGTGCTTTTAAGAATATCAACGATTATAACTATCAAACCCTCAAAGATAATGTCGACACGTTGAAGT
TGATTCAGTTGGGTCTTACGTTTTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACAGATAAGTTTTGCATTTGGCAGTTCAATTTCAGGGAGTTCAACATTAGTAAC
GATATTTTCGCTAGTGATTCCATTGAGCTTTTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATTGATGTCAATCACTTCGGTGAGCTTCTAATGTC
ATCTGGGATTGTTTTGAACGATAATGTTTACTGGGTGACCTTTCACAGTGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACTTGCCGAAGCCTACCAGGGACGCAGG
CTGCATTCTTTGATTTGATCAATATGTATTTCCCAATGGTTTATGACATCAAGCATTTGATGAAGTTTTGCAACAGTTTCCATGGTGGGCTGAACAAGCTTGCAGAGTTA
TTAGAAGTGGAAAGGATTGGAGTTTGCCATCAAGCGGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTGAGGGATACTTTTTTCAATGGGTCTACTCAGAA
ATACGCCGGTGTTTTATATGGTCTGGGCGTTGAAACTGGCCAGACTACTAATTAA
Protein sequenceShow/hide protein sequence
MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDYNYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISN
DIFASDSIELLRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLPGTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGQTTN