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CmoCh12G003300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionArginine/serine-rich zinc knuckle-containing protein 33
Genome locationCmo_Chr12:2050878..2052113
RNA-Seq ExpressionCmoCh12G003300
SyntenyCmoCh12G003300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER34407.1 arginine/serine-rich zinc knuckle-containing protein 33, partial [Striga asiatica]2.3e-1037.8Show/hide
Query:  RRLCSEPERLHRRLSYYALALLISDLRGRNPDLGLGFGRSQEAASASSAASEVDCSGRLNGERVVGVG-RVVERRDRNSLMTASEGIGRVDIVVASDAES
        RR+  +P+   RR    A   L++ LR     L  G G+ +          EV     L G    G G  VVE   R +L+ A EG+G VD+ VA  AE 
Subjt:  RRLCSEPERLHRRLSYYALALLISDLRGRNPDLGLGFGRSQEAASASSAASEVDCSGRLNGERVVGVG-RVVERRDRNSLMTASEGIGRVDIVVASDAES

Query:  SSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSGHLTGITKLR
          VGLAG+    LL D   P AR+AG +LVG +D GVA +A++G V +AE  G   L  +  LR
Subjt:  SSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSGHLTGITKLR

KAF1871202.1 hypothetical protein Lal_00019994 [Lupinus albus]1.5e-0946.39Show/hide
Query:  RLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSG
        R NG +    G V+E RDR +LM + E I  VD+ VAS+AE SS+ LA ++SRSL  + T+    M G +LVG +D GVA  A++G V +A E G G
Subjt:  RLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSG

KCW78758.1 hypothetical protein EUGRSUZ_C00194 [Eucalyptus grandis]3.2e-0435.88Show/hide
Query:  AASASSAASEVDCSG-RLNGERVV-------GVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDF
        AA A++AA+ V  +G   +GE V        G+G V E    + L+ A EG+G VD+ VA DAE   V LA         D   P+  +A  +  G +D 
Subjt:  AASASSAASEVDCSG-RLNGERVV-------GVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDF

Query:  GVAAKAKKGRVSSAEESGSGHLTGITKLRSH
        GVAA+A++ RV +AE      L  + +LR H
Subjt:  GVAAKAKKGRVSSAEESGSGHLTGITKLRSH

PON58582.1 hypothetical protein TorRG33x02_290670 [Trema orientale]2.3e-1043.52Show/hide
Query:  SASSAASEVDCSGRLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGR
        +A++   EV+  G  +     GVG V E  D +S++   EG+G VD+ VA DAE   VGLAG+    LL D   P+A +   +LVG +D GVAA+A++GR
Subjt:  SASSAASEVDCSGRLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGR

Query:  VSSAEESG
        V SAE  G
Subjt:  VSSAEESG

TrEMBL top hitse value%identityAlignment
A0A059CJX0 Uncharacterized protein1.6e-0435.88Show/hide
Query:  AASASSAASEVDCSG-RLNGERVV-------GVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDF
        AA A++AA+ V  +G   +GE V        G+G V E    + L+ A EG+G VD+ VA DAE   V LA         D   P+  +A  +  G +D 
Subjt:  AASASSAASEVDCSG-RLNGERVV-------GVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDF

Query:  GVAAKAKKGRVSSAEESGSGHLTGITKLRSH
        GVAA+A++ RV +AE      L  + +LR H
Subjt:  GVAAKAKKGRVSSAEESGSGHLTGITKLRSH

A0A2P5CC11 Uncharacterized protein1.1e-1043.52Show/hide
Query:  SASSAASEVDCSGRLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGR
        +A++   EV+  G  +     GVG V E  D +S++   EG+G VD+ VA DAE   VGLAG+    LL D   P+A +   +LVG +D GVAA+A++GR
Subjt:  SASSAASEVDCSGRLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGR

Query:  VSSAEESG
        V SAE  G
Subjt:  VSSAEESG

A0A5A7PQ05 Arginine/serine-rich zinc knuckle-containing protein 33 (Fragment)1.1e-1037.8Show/hide
Query:  RRLCSEPERLHRRLSYYALALLISDLRGRNPDLGLGFGRSQEAASASSAASEVDCSGRLNGERVVGVG-RVVERRDRNSLMTASEGIGRVDIVVASDAES
        RR+  +P+   RR    A   L++ LR     L  G G+ +          EV     L G    G G  VVE   R +L+ A EG+G VD+ VA  AE 
Subjt:  RRLCSEPERLHRRLSYYALALLISDLRGRNPDLGLGFGRSQEAASASSAASEVDCSGRLNGERVVGVG-RVVERRDRNSLMTASEGIGRVDIVVASDAES

Query:  SSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSGHLTGITKLR
          VGLAG+    LL D   P AR+AG +LVG +D GVA +A++G V +AE  G   L  +  LR
Subjt:  SSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSGHLTGITKLR

A0A6A5MKE3 Uncharacterized protein7.2e-1046.39Show/hide
Query:  RLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSG
        R NG +    G V+E RDR +LM + E I  VD+ VAS+AE SS+ LA ++SRSL  + T+    M G +LVG +D GVA  A++G V +A E G G
Subjt:  RLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGNMSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCGACGCCTTTGCTCTGAACCGGAACGACTCCATCGGCGCCTGAGCTATTATGCTCTCGCACTTCTAATTTCGGATCTACGCGGTCGTAATCCAGATCTAGG
GTTAGGGTTTGGAAGAAGCCAGGAAGCAGCTTCGGCCTCTTCGGCGGCGTCGGAAGTTGATTGCAGCGGCAGGCTTAACGGCGAGAGAGTTGTCGGAGTTGGAAGAGTCG
TAGAAAGGCGTGACAGGAACTCGCTCATGACGGCGAGCGAGGGGATTGGCAGAGTGGATATCGTGGTCGCAAGTGATGCAGAGAGCAGCAGCGTCGGCCTTGCAGGTAAC
ATGAGCAGGAGCTTGCTCACAGACTTCACAAAGCCATACGCGCGCATGGCGGGAAGCAAGCTTGTTGGCTGCATGGACTTTGGAGTCGCAGCCAAGGCAAAGAAAGGCAG
AGTCAGCTCGGCAGAAGAGAGTGGCAGCGGCCACCTTACAGGAATCACAAAGCTTCGAAGCCATACTTCAATGGCGGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
TCAACTGCCCCAGCTATTTTTCTTCCTTCCTATTTACACGAACTATTTTTTAATTAATTATTATTTTATTAGCTATTCAAACTTAGAACGACGGAACGACGCCGTATCCA
CTCACTCGGTCGGCTTCCAACTCGATATCCGTCCGTTTGGCGAACCGTCCCTTGATTCGTGGTCTCGTCTCGGCGTAGGCCTTACGAGATGCGTATCGAATCGTCTTCTC
GAACTTTCTGTTCTTCCTCTTTTCTCTGTACCTCAACACTCTCGCCTCTCGATCTGCCGGCGAGATTTGCAGCGGTGGAACAGTCGATTCCGTTGACGGTTTCGTGTACG
GATTCGATATCTCCGTTATCGTGTTCCCCTCCGGAACGACTCCGACCTCGACCGACGAGGATGATACCTGAAAGTCATGAAGAATAAGTGAGAGGGGAAGTCGATGCCGA
AGCTACGATCGTTTACCGATGAGAGATCGACGCCTTTGCTCTGAACCGGAACGACTCCATCGGCGCCTGAGCTATTATGCTCTCGCACTTCTAATTTCGGATCTACGCGG
TCGTAATCCAGATCTAGGGTTAGGGTTTGGAAGAAGCCAGGAAGCAGCTTCGGCCTCTTCGGCGGCGTCGGAAGTTGATTGCAGCGGCAGGCTTAACGGCGAGAGAGTTG
TCGGAGTTGGAAGAGTCGTAGAAAGGCGTGACAGGAACTCGCTCATGACGGCGAGCGAGGGGATTGGCAGAGTGGATATCGTGGTCGCAAGTGATGCAGAGAGCAGCAGC
GTCGGCCTTGCAGGTAACATGAGCAGGAGCTTGCTCACAGACTTCACAAAGCCATACGCGCGCATGGCGGGAAGCAAGCTTGTTGGCTGCATGGACTTTGGAGTCGCAGC
CAAGGCAAAGAAAGGCAGAGTCAGCTCGGCAGAAGAGAGTGGCAGCGGCCACCTTACAGGAATCACAAAGCTTCGAAGCCATACTTCAATGGCGGAAAACTGA
Protein sequenceShow/hide protein sequence
MRDRRLCSEPERLHRRLSYYALALLISDLRGRNPDLGLGFGRSQEAASASSAASEVDCSGRLNGERVVGVGRVVERRDRNSLMTASEGIGRVDIVVASDAESSSVGLAGN
MSRSLLTDFTKPYARMAGSKLVGCMDFGVAAKAKKGRVSSAEESGSGHLTGITKLRSHTSMAEN