; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G003390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPseudouridine synthase
Genome locationCmo_Chr12:2112041..2117544
RNA-Seq ExpressionCmoCh12G003390
SyntenyCmoCh12G003390
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR002942 - RNA-binding S4 domain
IPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR006224 - Pseudouridine synthase, RluC/RluD, conserved site
IPR006225 - Pseudouridine synthase, RluC/RluD
IPR020103 - Pseudouridine synthase, catalytic domain superfamily
IPR036986 - RNA-binding S4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020434.1 RNA pseudouridine synthase 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.5e-24199.77Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKK
        NIRFSCPPPTDFAEILGQLRQISTKK
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKK

XP_022142903.1 RNA pseudouridine synthase 2, chloroplastic isoform X1 [Momordica charantia]3.8e-20887.21Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MIS+CS RAIQAAPSIQLFFPRNRGRI+ +V RIATNHS RCS  DECG E   E  TNYAGMRLEEIV+  SGK+RLDSWISCRI+GISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLV+VNGRVIDK SHN+KAGD INCTISELQPLRA+PEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV T+N E LSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDE +S EILSSR SEAPIRPGIVHR+DKGTSGLLVVAKDEH+HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPI RDPNNRIRMSAV RTN N +
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIE LAQGG SLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMA+SLLRTRTSSSCHSQLMQLVS+LERPCLHALTLGFIHP+TG+
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFA+I  QL +I TKKVT+S
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

XP_022951936.1 RNA pseudouridine synthase 2, chloroplastic [Cucurbita moschata]7.4e-244100Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFAEILGQLRQISTKKVTKS
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

XP_023002352.1 RNA pseudouridine synthase 2, chloroplastic [Cucurbita maxima]3.7e-23597.21Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MIS+CSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHS RCSGSDECG ETLPEP TNYAGMRLEEIV+T SGKVR+DSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVI+KASHNVKAGDKINCTISELQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS+
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSS HSQLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFAEILGQLRQISTKKVTKS
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

XP_023538538.1 RNA pseudouridine synthase 2, chloroplastic [Cucurbita pepo subsp. pepo]2.2e-24098.37Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHS RCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVIDKASHNV+AGDKINCTISELQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSA+SRTNNNSN
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGD+VYGGTKSMAMSLLRTRTSSSCH+QLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFAEILGQLRQISTKKVTKS
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

TrEMBL top hitse value%identityAlignment
A0A1S3BCE4 Pseudouridine synthase6.9e-19582.68Show/hide
Query:  MISICSARAIQAAP-SIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIR
        MIS+CSAR IQA+P SI  FFPRNR RI  +VLR + N S RCS  DE   E   E   NYAG RLEE V+   GKVRLDSWIS RI+GISRARVQSSIR
Subjt:  MISICSARAIQAAP-SIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIR

Query:  AGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDI
        AGLVSVNGRVIDK SHNVKAGD INCTISELQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+T+  E  SD+D+
Subjt:  AGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDI

Query:  SDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS
        SDDE +SIE+  SRVSEAPIRPGIVHR+DKGTSGLLVVAKDEH+HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PI RDPNNRIRM+A   T NN 
Subjt:  SDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS

Query:  NAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTG
        +AK+AASRY V+E LAQGG SLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTR SS+CH QLMQLVSSLERPCLHALTLGF+HPHTG
Subjt:  NAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTG

Query:  KNIRFSCPPPTDFAEILGQLRQISTKK--VTKS
        KNIRFSCPPPTDFAEIL QLR+I TKK  VTKS
Subjt:  KNIRFSCPPPTDFAEILGQLRQISTKK--VTKS

A0A1S3BD56 Pseudouridine synthase2.1e-19683.06Show/hide
Query:  MISICSARAIQAAP-SIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIR
        MIS+CSAR IQA+P SI  FFPRNR RI  +VLR + N S RCS  DE   E   E   NYAG RLEE V+   GKVRLDSWIS RI+GISRARVQSSIR
Subjt:  MISICSARAIQAAP-SIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIR

Query:  AGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDI
        AGLVSVNGRVIDK SHNVKAGD INCTISELQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV+T+  E  SD+D+
Subjt:  AGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDI

Query:  SDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS
        SDDE +SIE+  SRVSEAPIRPGIVHR+DKGTSGLLVVAKDEH+HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE+PI RDPNNRIRM+A   T NN 
Subjt:  SDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS

Query:  NAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTG
        +AK+AASRY V+E LAQGG SLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTR SS+CH QLMQLVSSLERPCLHALTLGF+HPHTG
Subjt:  NAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTG

Query:  KNIRFSCPPPTDFAEILGQLRQISTKKVTKS
        KNIRFSCPPPTDFAEIL QLR+I TKKVTKS
Subjt:  KNIRFSCPPPTDFAEILGQLRQISTKKVTKS

A0A6J1CMS3 Pseudouridine synthase1.9e-20887.21Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MIS+CS RAIQAAPSIQLFFPRNRGRI+ +V RIATNHS RCS  DECG E   E  TNYAGMRLEEIV+  SGK+RLDSWISCRI+GISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLV+VNGRVIDK SHN+KAGD INCTISELQPLRA+PEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV T+N E LSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDE +S EILSSR SEAPIRPGIVHR+DKGTSGLLVVAKDEH+HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPI RDPNNRIRMSAV RTN N +
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIE LAQGG SLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMA+SLLRTRTSSSCHSQLMQLVS+LERPCLHALTLGFIHP+TG+
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFA+I  QL +I TKKVT+S
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

A0A6J1GIW0 Pseudouridine synthase3.6e-244100Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFAEILGQLRQISTKKVTKS
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

A0A6J1KJA7 Pseudouridine synthase1.8e-23597.21Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA
        MIS+CSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHS RCSGSDECG ETLPEP TNYAGMRLEEIV+T SGKVR+DSWISCRIDGISRARVQSSIRA
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRA

Query:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS
        GLVSVNGRVI+KASHNVKAGDKINCTISELQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD DIS
Subjt:  GLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDIS

Query:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN
        DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS+
Subjt:  DDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSN

Query:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK
        AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSS HSQLMQLVSSLERPCLHALTLGFIHPHTGK
Subjt:  AKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGK

Query:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS
        NIRFSCPPPTDFAEILGQLRQISTKKVTKS
Subjt:  NIRFSCPPPTDFAEILGQLRQISTKKVTKS

SwissProt top hitse value%identityAlignment
O50310 Uncharacterized RNA pseudouridine synthase Cpar_07235.1e-5437.82Show/hide
Query:  VRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN
        +R+D +++ +++ ++R +VQ++I  G V VNG+ + K+++ VK+ D I+ T          PEDI + I+YED+ ++V++K A MVVHPA GN TGTL N
Subjt:  VRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN

Query:  AILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRI
        AIL+H                     DEL+  E          +RPGIVHR+DK TSGL+++AK+  A   L+ QF    +E+VY ++  GVP + +G I
Subjt:  AILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRI

Query:  EVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLM
        +  IGR   NR  M+  +     +  K+A + Y+V+E+L  G FSL++  L TGRTHQIR H +++G  +LGDE YGG         RT   S       
Subjt:  EVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLM

Query:  QLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQIST
         L+  + R  LHA TL F  P TG+ + FS P P D   +L ++R + T
Subjt:  QLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQIST

P50513 Ribosomal large subunit pseudouridine synthase D1.0e-5440.86Show/hide
Query:  RLDSWISCRIDGISRARVQSSIRAGLVS-VNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN
        RLD  ++  I  +SR R+++ I +G VS   G ++   +  +K+ D     I   +P   EP+DI L+IV+EDEH+LVVNKPA MVVHPA GN   TLVN
Subjt:  RLDSWISCRIDGISRARVQSSIRAGLVS-VNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVN

Query:  AILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRI
        A+L HC+                    +L+ I  ++        RPGIVHRIDK TSGLLVVAK + AHA L+AQF  HSI R Y ++  G  PS  G +
Subjt:  AILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRI

Query:  EVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLM
        + P+ R   NR +M+ VS    +   K A + Y++I  L     SL+E RLETGRTHQ+R H   +G  LLGD VYG +K               H  L+
Subjt:  EVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLM

Query:  QLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQISTK
        Q + + +R  LHA  LGFIHP +GK + F    P D  ++L ++  IS +
Subjt:  QLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQISTK

Q3ECD0 RNA pseudouridine synthase 2, chloroplastic2.0e-14367.72Show/hide
Query:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE
        C    +  PR N AG+R+EEIV+   GK+RLDSWIS RI+G+SRARVQSSIR GLV+VNGRV+DK SHNVK+GD++NCTISELQPL+AE EDI LDIVYE
Subjt:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE

Query:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA
        D+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  +N E   D+D    SDDE    E+ +S  S  A +RPGIVHR+DKGT+GLLVVAKDEH+
Subjt:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA

Query:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGI
        HAHL+ QFK H+IERVY+SLT GVP    GRIE+PIGRD +NRIRM+A+        A++AASRYKVIE  A GG +LVEWRLETGRTHQIRAHAKYMG+
Subjt:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGI

Query:  PLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ
        PLLGDEVYGGTKSMA+SLL+ R S S   ++++L+S ++RPCLHA+ LGF HP TG+ ++FSCPPP+D AEI+G LR+
Subjt:  PLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ

Q45480 Uncharacterized RNA pseudouridine synthase YlyB1.3e-5439.13Show/hide
Query:  RLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNA
        R+D +++   +  SR +VQ  ++ G V VNG  + KA++ ++ GD++  T+ E + L    E + LDI YED+ VLVVNKP  MVVHPAPG+ TGTLVN 
Subjt:  RLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNA

Query:  ILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE
        ++ HC               TD+S   +N +           +RPGIVHRIDK TSGLL+VAK++ AH  L  Q    ++ R Y ++  G+     G I+
Subjt:  ILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE

Query:  VPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQ
         PIGRD  +R  M+ V+R   N     A + + V+E      F+LVE +LETGRTHQIR H KY+G PL GD  YG  K++                   
Subjt:  VPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQ

Query:  LVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ
                 LHA  LGF HP TG+ + F  P P D AE++  LR+
Subjt:  LVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ

Q5Z8P2 RNA pseudouridine synthase 2, chloroplastic7.7e-13558.29Show/hide
Query:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRI--DGISRARVQSSI
        M +  +A     A ++     R R R S    R       RC  +D   +   P  R  + G RLEE V    G+ R+D+WIS R+   G+SRAR+Q+SI
Subjt:  MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRI--DGISRARVQSSI

Query:  RAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD--
        RAGLV VNGR + K SH VK GD ++CT+ ELQPLRAEPEDI LDIVYED+H+LVVNKPAHMVVHPAPGNA GTLVNAIL+HC +   T      + D  
Subjt:  RAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD--

Query:  TDISDDELNSIEI-------LSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRM
         D SDD+++  +I       +SS V EA +RPGIVHR+DKGTSGLLVVAKDEH+HA L+ QFK H+I RVYISLTCG P   +GRIEVPI RDPNNRIRM
Subjt:  TDISDDELNSIEI-------LSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRM

Query:  SAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHAL
         A   + +   A++AASRYKV E  A GG +LVEWRLETGRTHQIRAHAKY+GIPLLGDE YGGTKSMA+SLLR RT S  H  L  ++S ++RPCLHA 
Subjt:  SAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHAL

Query:  TLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQIS
         LGF HPH+GK + FSCPPP DF E+L +L Q++
Subjt:  TLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQIS

Arabidopsis top hitse value%identityAlignment
AT1G76050.1 Pseudouridine synthase family protein2.6e-9367.05Show/hide
Query:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE
        C    +  PR N AG+R+EEIV+   GK+RLDSWIS RI+G+SRARVQSSIR GLV+VNGRV+DK SHNVK+GD++NCTISELQPL+AE EDI LDIVYE
Subjt:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE

Query:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA
        D+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  +N E   D+D    SDDE    E+ +S  S  A +RPGIVHR+DKGT+GLLVVAKDEH+
Subjt:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA

Query:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASR
        HAHL+ QFK H+IERVY+SLT GVP    GRIE+PIGRD +NRIRM+A+        A++AASR
Subjt:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASR

AT1G76050.2 Pseudouridine synthase family protein1.4e-14467.72Show/hide
Query:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE
        C    +  PR N AG+R+EEIV+   GK+RLDSWIS RI+G+SRARVQSSIR GLV+VNGRV+DK SHNVK+GD++NCTISELQPL+AE EDI LDIVYE
Subjt:  CGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYE

Query:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA
        D+HVLVVNKPAHMVVHPAPGN TGTLVN IL+HCSLP V  +N E   D+D    SDDE    E+ +S  S  A +RPGIVHR+DKGT+GLLVVAKDEH+
Subjt:  DEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTD---ISDDELNSIEILSSRVS-EAPIRPGIVHRIDKGTSGLLVVAKDEHA

Query:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGI
        HAHL+ QFK H+IERVY+SLT GVP    GRIE+PIGRD +NRIRM+A+        A++AASRYKVIE  A GG +LVEWRLETGRTHQIRAHAKYMG+
Subjt:  HAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGI

Query:  PLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ
        PLLGDEVYGGTKSMA+SLL+ R S S   ++++L+S ++RPCLHA+ LGF HP TG+ ++FSCPPP+D AEI+G LR+
Subjt:  PLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQ

AT3G19440.1 Pseudouridine synthase family protein5.3e-1427.88Show/hide
Query:  IVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHA
        ++Y+D  ++V+NKP  + V    G  T                             S DEL +   L    SE+   P +VHR+D+  SGLLV+A+ + A
Subjt:  IVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHA

Query:  HAHLSAQFKQ--------------HSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS--NAKYAASRYKVIENLAQGGFSLVEWRLE
           L + F++               S++R Y++L  G PP   G+I  P+ +   +  +   ++  +N    + ++A + Y+VIE+ +  G++ +E R  
Subjt:  HAHLSAQFKQ--------------HSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNS--NAKYAASRYKVIENLAQGGFSLVEWRLE

Query:  TGRTHQIRAH-AKYMGIPLLGDEVYG
        TGR HQ+R H A+ +G P++GD  YG
Subjt:  TGRTHQIRAH-AKYMGIPLLGDEVYG

AT3G52260.1 Pseudouridine synthase family protein1.9e-1126.87Show/hide
Query:  IRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIY-LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD
        I+ G + ++G V+   +  +++G K+   +    P + EP+  Y L+++YED+ ++ +NKP+ + V P      G L            V T  +     
Subjt:  IRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIY-LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD

Query:  TDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI
         D           + SR S  P+    VHR+ +GTSG+L+ AK + A   L+A F +                   + ++Y +L  G+       I+ PI
Subjt:  TDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI

Query:  G--RDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPL
        G  R P     +   S        K A S+  V+E   +   SLV+  +++GR HQIR H  YMG PL
Subjt:  G--RDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPL

AT3G52260.2 Pseudouridine synthase family protein6.9e-1427.37Show/hide
Query:  IRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIY-LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD
        I+ G + ++G V+   +  +++G K+   +    P + EP+  Y L+++YED+ ++ +NKP+ + V P      G L            V T  +     
Subjt:  IRAGLVSVNGRVIDKASHNVKAGDKINCTISELQPLRAEPEDIY-LDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSD

Query:  TDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI
         D           + SR S  P+    VHR+ +GTSG+L+ AK + A   L+A F +                   + ++Y +L  G+       I+ PI
Subjt:  TDISDDELNSIEILSSRVSEAPIRPGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQ-----------------HSIERVYISLTCGVPPSTAGRIEVPI

Query:  G--RDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY
        G  R P     +   S        K A S+  V+E   +   SLV+  +++GR HQIR H  YMG PL+GD +Y
Subjt:  G--RDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCATTTGCTCTGCTAGAGCAATTCAAGCTGCACCTTCAATTCAGTTGTTTTTCCCTCGAAACCGTGGAAGAATCTCTTATGATGTTCTTCGAATCGCTACCAA
TCACTCTGTCAGATGCTCGGGTTCCGATGAGTGTGGTGATGAAACTCTTCCTGAACCGAGAACCAATTACGCCGGAATGAGACTGGAAGAGATCGTGGAGACAAAATCCG
GTAAAGTTCGTCTTGATTCTTGGATATCCTGCCGCATCGACGGGATTAGTAGGGCTCGGGTGCAGTCCAGTATTAGGGCCGGACTGGTTTCAGTCAATGGCCGAGTTATC
GATAAGGCTTCTCACAATGTTAAAGCTGGGGATAAGATTAATTGTACAATTTCGGAATTGCAGCCATTGAGAGCTGAACCTGAAGATATTTATTTGGATATAGTTTATGA
GGATGAACATGTTTTAGTGGTAAACAAACCGGCGCACATGGTTGTTCATCCAGCTCCTGGGAATGCTACAGGAACACTAGTAAATGCCATTCTTAACCACTGCAGTCTCC
CAATGGTTACAACGACAAATGAGGAACTTCTGTCAGACACGGATATTTCTGATGATGAGCTCAATTCCATTGAGATTTTATCTTCTAGAGTTTCTGAGGCACCTATTCGT
CCTGGAATTGTGCATAGGATAGATAAAGGAACTAGTGGATTGCTTGTTGTTGCCAAGGATGAACATGCCCACGCTCACTTATCTGCTCAATTCAAGCAACATTCTATTGA
GAGAGTCTATATCAGTCTCACATGTGGAGTTCCACCCTCAACTGCTGGACGTATCGAGGTACCAATAGGCCGTGATCCGAATAATCGTATTCGCATGAGTGCAGTATCTA
GAACAAATAACAATTCAAATGCAAAGTACGCTGCTAGTAGGTACAAAGTTATTGAAAATTTAGCTCAAGGAGGTTTTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGC
ACACATCAGATCCGTGCACATGCGAAGTATATGGGAATACCCTTACTTGGAGATGAGGTCTATGGAGGTACCAAGAGCATGGCCATGTCGCTGCTTCGGACTCGAACATC
ATCTAGTTGTCACAGCCAACTTATGCAACTTGTTTCCTCATTAGAGAGGCCTTGCCTTCATGCTCTAACTCTCGGGTTTATACATCCTCACACAGGGAAGAACATACGAT
TTTCATGCCCACCCCCTACAGATTTTGCTGAAATTCTGGGTCAGCTTCGTCAAATTAGCACAAAAAAGGTTACCAAATCTTAA
mRNA sequenceShow/hide mRNA sequence
TAGGCGAAAACCCAAGAACCAAATATCGAACTCGGGAGAATGATTTCCATTTGCTCTGCTAGAGCAATTCAAGCTGCACCTTCAATTCAGTTGTTTTTCCCTCGAAACCG
TGGAAGAATCTCTTATGATGTTCTTCGAATCGCTACCAATCACTCTGTCAGATGCTCGGGTTCCGATGAGTGTGGTGATGAAACTCTTCCTGAACCGAGAACCAATTACG
CCGGAATGAGACTGGAAGAGATCGTGGAGACAAAATCCGGTAAAGTTCGTCTTGATTCTTGGATATCCTGCCGCATCGACGGGATTAGTAGGGCTCGGGTGCAGTCCAGT
ATTAGGGCCGGACTGGTTTCAGTCAATGGCCGAGTTATCGATAAGGCTTCTCACAATGTTAAAGCTGGGGATAAGATTAATTGTACAATTTCGGAATTGCAGCCATTGAG
AGCTGAACCTGAAGATATTTATTTGGATATAGTTTATGAGGATGAACATGTTTTAGTGGTAAACAAACCGGCGCACATGGTTGTTCATCCAGCTCCTGGGAATGCTACAG
GAACACTAGTAAATGCCATTCTTAACCACTGCAGTCTCCCAATGGTTACAACGACAAATGAGGAACTTCTGTCAGACACGGATATTTCTGATGATGAGCTCAATTCCATT
GAGATTTTATCTTCTAGAGTTTCTGAGGCACCTATTCGTCCTGGAATTGTGCATAGGATAGATAAAGGAACTAGTGGATTGCTTGTTGTTGCCAAGGATGAACATGCCCA
CGCTCACTTATCTGCTCAATTCAAGCAACATTCTATTGAGAGAGTCTATATCAGTCTCACATGTGGAGTTCCACCCTCAACTGCTGGACGTATCGAGGTACCAATAGGCC
GTGATCCGAATAATCGTATTCGCATGAGTGCAGTATCTAGAACAAATAACAATTCAAATGCAAAGTACGCTGCTAGTAGGTACAAAGTTATTGAAAATTTAGCTCAAGGA
GGTTTTTCATTGGTTGAGTGGAGATTAGAAACAGGCCGCACACATCAGATCCGTGCACATGCGAAGTATATGGGAATACCCTTACTTGGAGATGAGGTCTATGGAGGTAC
CAAGAGCATGGCCATGTCGCTGCTTCGGACTCGAACATCATCTAGTTGTCACAGCCAACTTATGCAACTTGTTTCCTCATTAGAGAGGCCTTGCCTTCATGCTCTAACTC
TCGGGTTTATACATCCTCACACAGGGAAGAACATACGATTTTCATGCCCACCCCCTACAGATTTTGCTGAAATTCTGGGTCAGCTTCGTCAAATTAGCACAAAAAAGGTT
ACCAAATCTTAATTGGGATCCTTCAGTATCTAGCATACACACTCAGCGTCAAACGACTCGGGCATGAAAGACCGAGAAGGGAATGTTCCTAAACTCAATATCCCAATATC
GAAATCGAGGCATAGCAGCACGCAACAATGGCATTAGAAATGGAAACGACACACCGTATCGGTACACTTGATGGTGCTTCTACAGTCGAGATGATCGTGTTGCTTGTGTT
GAACATTCGCCTAATCGCCATGTCCAATGGAACCTCATGTTTCACTTAGTATTGATGGTAAGCCAGCCACCATTGCTATTAATCCATAGGAATGTAGTCGAATATTCATC
GTCATTCAATTGGAAATATATTTGAAAGACATGATTGCAGTAAATTGGGACTCCCTTGAGTGAATTCAAATTAGGCGCTATGAACGTTATGAACATTCCAAGTTACGACA
TCCCTTTGTAAGGTTCTTTATCTCGGGGTTTAGGAATTAG
Protein sequenceShow/hide protein sequence
MISICSARAIQAAPSIQLFFPRNRGRISYDVLRIATNHSVRCSGSDECGDETLPEPRTNYAGMRLEEIVETKSGKVRLDSWISCRIDGISRARVQSSIRAGLVSVNGRVI
DKASHNVKAGDKINCTISELQPLRAEPEDIYLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVTTTNEELLSDTDISDDELNSIEILSSRVSEAPIR
PGIVHRIDKGTSGLLVVAKDEHAHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEVPIGRDPNNRIRMSAVSRTNNNSNAKYAASRYKVIENLAQGGFSLVEWRLETGR
THQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRTSSSCHSQLMQLVSSLERPCLHALTLGFIHPHTGKNIRFSCPPPTDFAEILGQLRQISTKKVTKS