; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G003510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionSec-independent protein translocase protein TATC
Genome locationCmo_Chr12:2170295..2170852
RNA-Seq ExpressionCmoCh12G003510
SyntenyCmoCh12G003510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020445.1 hypothetical protein SDJN02_17129, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9395.24Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYS----HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYS----HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        EPSHVPKDL VVLGLRLPPPS PP EGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK+NCNV+AAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

XP_022951686.1 uncharacterized protein LOC111454434 [Cucurbita moschata]1.4e-98100Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH

Query:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
Subjt:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

XP_023002514.1 uncharacterized protein LOC111496332 [Cucurbita maxima]4.5e-8992.97Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPS AEAQPSC PKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNR+GPEPSH
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH

Query:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        VPKDL VVLGLRLPPP   P E SRSLGVAAEIEFSGSAF+VSPPPSSVPLPNF LMRKLNCNVEAAAGID GAT+NLRRLLRLR
Subjt:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

XP_023538239.1 uncharacterized protein LOC111799074 [Cucurbita pepo subsp. pepo]4.8e-9193.65Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYS----HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP
        MEAVLIPHNFSPAAPAVTFYS    HRRRHRRQPPRFP PRRSFPPSAAE+QPSCRPKGVRFRDQSLAPKK KSIKRCRELPVEMTAEALIVDSTNRMGP
Subjt:  MEAVLIPHNFSPAAPAVTFYS----HRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGP

Query:  EPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        EPSHVPKDL VVLGLRLPPP  PP EGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNF LMRKLNCNVEAAAGIDAGATDNLRRLLRLR
Subjt:  EPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

XP_023546813.1 proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]1.4e-5363.77Show/hide
Query:  MEAVLIPH-----------NFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-
        MEAVLIP            NFSPA           PAV  YSH  RH +QPP  PLPRR FPP+A  A PSCRPKG + RDQSL PKKSK IKR R  P 
Subjt:  MEAVLIPH-----------NFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-

Query:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL
        ++ TAE +IVDSTNR+GPEPSHVPKDL  VLGLR    S+PPREG RS     E EFSGS F VSPPPSSVPLP F L R+++CNVE AAG+DAGATDNL
Subjt:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL

Query:  RRLLRLR
        RRLLRLR
Subjt:  RRLLRLR

TrEMBL top hitse value%identityAlignment
A0A0A0LN70 Uncharacterized protein3.3e-4560.21Show/hide
Query:  PHNFSPA----------APAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-VEMTAEALIVDSTNRMG
        P NFSPA           P +++ S R+   +QPP  PLPRR  PPS   A  S RPK + FRDQSL PKKSK IKR R  P  + T E +IVDSTNR+G
Subjt:  PHNFSPA----------APAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-VEMTAEALIVDSTNRMG

Query:  PEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK-LNCNVEAAAGIDAGATDNLRRLLRLR
        PEPSHVPKDL  +LGLR   PS P  E +RS   AAEIEFSGSA++ SPPPSSVPLP F L RK + CNVE A+G+DAGATDNLRRLLR+R
Subjt:  PEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRK-LNCNVEAAAGIDAGATDNLRRLLRLR

A0A6J1GI76 uncharacterized protein LOC1114544346.8e-99100Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH

Query:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
Subjt:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

A0A6J1HFM4 uncharacterized protein LOC1114630192.1e-5262.8Show/hide
Query:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-
        ME VLIP            NF PA           PAV  YSHR   R+QPP  PLPRR FPP+A  A PSCRPKG + RDQSL PKKSK IKR R  P 
Subjt:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-

Query:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL
        ++ TAE +IVDSTNR+GPEPSHVPKDL  VLGLR    S+PPREG R      E EFSGSAF VSPPPSSVPLP F L R+++CNVE AAG+DAGATDNL
Subjt:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL

Query:  RRLLRLR
        RRLLRLR
Subjt:  RRLLRLR

A0A6J1KEH8 uncharacterized protein LOC1114925082.5e-5363.29Show/hide
Query:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-
        MEAVLIP            NFSPA           PAV  YSH  RH +QPP  PLP R FPP+A    PSCRPKG + RDQSL PKKSK IKR R  P 
Subjt:  MEAVLIP-----------HNFSPAA----------PAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELP-

Query:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL
        ++ TAE +IVDSTNR+GPEPSHVPKDL  VLGLR    S+PPREG RS     E EFSGSAF VSPPPSSVPLP F L R+++CNVE AAG+DAGATDNL
Subjt:  VEMTAEALIVDSTNRMGPEPSHVPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNL

Query:  RRLLRLR
        RRLLRLR
Subjt:  RRLLRLR

A0A6J1KQN3 uncharacterized protein LOC1114963322.2e-8992.97Show/hide
Query:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH
        MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPS AEAQPSC PKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNR+GPEPSH
Subjt:  MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSH

Query:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        VPKDL VVLGLRLPPP   P E SRSLGVAAEIEFSGSAF+VSPPPSSVPLPNF LMRKLNCNVEAAAGID GAT+NLRRLLRLR
Subjt:  VPKDLCVVLGLRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20070.1 unknown protein1.2e-0759.09Show/hide
Query:  VSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        +SPPPSS+P+P F +  KL CNVEAA   D  AT+N+RR+L+LR
Subjt:  VSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR

AT3G21570.1 unknown protein6.2e-0444.83Show/hide
Query:  VAAEIEFSGSA-FNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
        V+A+  ++GS+ F VSP PSS+PLP+F   +K   +      ID  A+ +LRRLLRL+
Subjt:  VAAEIEFSGSA-FNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACGTTTTATAGCCATCGCCGTCGCCATCGCCGGCAACCGCCTCGCTTCCCTTTGCCCCG
TCGTTCATTTCCCCCTTCGGCGGCGGAAGCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAATCAAAATCAATTAAACGAT
GCAGAGAGCTGCCGGTTGAGATGACGGCGGAGGCTTTGATCGTTGATTCCACAAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGTGTCGTTTTAGGA
TTACGTTTGCCGCCGCCGTCGTCGCCGCCGAGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAATTTTCTGGTTCGGCGTTTAACGTTTCGCCGCCGCCGAG
TAGCGTGCCGCTTCCGAATTTCCCTCTGATGCGGAAGCTGAATTGTAATGTAGAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGCGACTTCTACGCC
TCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACGTTTTATAGCCATCGCCGTCGCCATCGCCGGCAACCGCCTCGCTTCCCTTTGCCCCG
TCGTTCATTTCCCCCTTCGGCGGCGGAAGCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAATCAAAATCAATTAAACGAT
GCAGAGAGCTGCCGGTTGAGATGACGGCGGAGGCTTTGATCGTTGATTCCACAAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGTGTCGTTTTAGGA
TTACGTTTGCCGCCGCCGTCGTCGCCGCCGAGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAATTTTCTGGTTCGGCGTTTAACGTTTCGCCGCCGCCGAG
TAGCGTGCCGCTTCCGAATTTCCCTCTGATGCGGAAGCTGAATTGTAATGTAGAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGCGACTTCTACGCC
TCCGATGA
Protein sequenceShow/hide protein sequence
MEAVLIPHNFSPAAPAVTFYSHRRRHRRQPPRFPLPRRSFPPSAAEAQPSCRPKGVRFRDQSLAPKKSKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLCVVLG
LRLPPPSSPPREGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFPLMRKLNCNVEAAAGIDAGATDNLRRLLRLR