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CmoCh12G003900 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G003900
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthioredoxin H-type-like
Genome locationCmo_Chr12:2418405..2420239
RNA-Seq ExpressionCmoCh12G003900
SyntenyCmoCh12G003900
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020483.1 hypothetical protein SDJN02_17168 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-5985.42Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKL---------------------IVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEIN
        MAEEGQVIACHKKAEWDAHLAKAKESGKL                     IVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEIN
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKL---------------------IVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEIN

Query:  AMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSSTA
        AMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSSTA
Subjt:  AMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTSSTA

XP_022951328.1 thioredoxin H-type-like [Cucurbita moschata]4.8e-63100Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSSTA
        KSALLKKIEELKTPTAATTSSTA
Subjt:  KSALLKKIEELKTPTAATTSSTA

XP_023002551.1 thioredoxin H-type-like [Cucurbita maxima]9.1e-6299.17Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        KSALLKKIEELKTPTAATTS+
Subjt:  KSALLKKIEELKTPTAATTSS

XP_023537338.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo]3.4e-6198.35Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCR IAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        KSALLKKIEELKTPTAATTS+
Subjt:  KSALLKKIEELKTPTAATTSS

XP_038886211.1 thioredoxin H-type-like [Benincasa hispida]1.8e-5487.6Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        M EEGQVIACHK+ EW+A LAK KESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGV+FLKVDVDELNTVA+EW+INAMPTFVF+K GETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        K ALLKK+EELKTPTAA TS+
Subjt:  KSALLKKIEELKTPTAATTSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRK2 Thioredoxin domain-containing protein1.6e-5181.3Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        M EEGQVIACHK++EW+A LAKAKESGKL+VVDFTASWCGPCRTIAPYFSELAKNH GV+F+KVDVDELN +A+EW+I AMPTFVF+K GETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSSTA
        ++ALLKKIEELKT T A  +STA
Subjt:  KSALLKKIEELKTPTAATTSSTA

A0A1S3BB48 thioredoxin H1-like1.3e-5385.12Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        M EEGQVIACHK++EWDA LAKAKESGKL+VVDFTASWCGPCRTIAPYFSELAKNHPGV+FLKVDVDELN +A+EW+INAMPTFVF+K GET+HKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        ++ALLKKIEELKT TAA TS+
Subjt:  KSALLKKIEELKTPTAATTSS

A0A6J1GHE8 thioredoxin H-type-like2.3e-63100Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSSTA
        KSALLKKIEELKTPTAATTSSTA
Subjt:  KSALLKKIEELKTPTAATTSSTA

A0A6J1KLL7 thioredoxin H-type-like4.4e-6299.17Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        KSALLKKIEELKTPTAATTS+
Subjt:  KSALLKKIEELKTPTAATTSS

K7NBX3 Thioredoxin H3.2e-4472.73Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEEGQVI CHK AEW   + K KESGKLIVVDFTASWCGPCR IAP F+ELAKN+P V+FLKVDVDELNTVA+EWEINAMPTFVF+K G+ +HKIVGAD
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAATTSS
        K  L  K+EE K    AT+++
Subjt:  KSALLKKIEELKTPTAATTSS

SwissProt top hitse value%identityAlignment
A2YIW7 Thioredoxin H-type6.4e-3458.33Show/hide
Query:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK
        AEEG VIACH K E+DA + KAKE+GK++++DFTASWCGPCR IAP F+E AK  PG VFLKVDVDEL  VA ++ + AMPTF+F+K G    K+VGA K
Subjt:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK

Query:  SALLKKIEELKTPTAATTSS
          L   I +    TAA+ S+
Subjt:  SALLKKIEELKTPTAATTSS

P29448 Thioredoxin H13.2e-3360.75Show/hide
Query:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK
        +EEGQVIACH    W+  L KA ES  L+VVDFTASWCGPCR IAP+F++LAK  P V+FLKVD DEL +VA++W I AMPTF+F+K G+ + K+VGA K
Subjt:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK

Query:  SALLKKI
          L   I
Subjt:  SALLKKI

Q0D840 Thioredoxin H16.4e-3458.33Show/hide
Query:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK
        AEEG VIACH K E+DA + KAKE+GK++++DFTASWCGPCR IAP F+E AK  PG VFLKVDVDEL  VA ++ + AMPTF+F+K G    K+VGA K
Subjt:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK

Query:  SALLKKIEELKTPTAATTSS
          L   I +    TAA+ S+
Subjt:  SALLKKIEELKTPTAATTSS

Q42403 Thioredoxin H38.3e-3458.97Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MA EG+VIACH   +W   L  A ES KLIV+DFTA+WC PCR IAP F++LAK H  VVF KVDVDELNTVA E+++ AMPTF+FMK GE    +VGA 
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAA
        K  ++  +E+ KT  AA
Subjt:  KSALLKKIEELKTPTAA

Q96419 Thioredoxin H-type9.8e-3563.89Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MAEE QVIACH   EW+    KAK+SGKLIV+DFTASWCGPCR I PY SELAK  P V F KVDVD+L  VA E+++ AMP+FV +K G+ V +IVGA 
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKI
        K  LL KI
Subjt:  KSALLKKI

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein2.7e-3262.04Show/hide
Query:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNH-PGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        AEEGQVI CH    W   L KAKES KLIV+DFTASWC PCR IAP F++LAK      +F KVDVDEL +VA E+ + AMPTFVF+K GE V K+VGA+
Subjt:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNH-PGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKI
        K  L  KI
Subjt:  KSALLKKI

AT1G45145.1 thioredoxin H-type 52.3e-3156.48Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MA EG+VIACH    W+  +  A ES KLIV+DFTASWC PCR IAP F+E+AK    VVF K+DVDEL  VA E+++ AMPTFVFMK G  + ++VGA 
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKI
        K  + +K+
Subjt:  KSALLKKI

AT3G17880.1 tetraticopeptide domain-containing thioredoxin2.7e-2747.66Show/hide
Query:  EGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSA
        +G+VI+ H  +E +A    AK++ +L+++ FTA+WCGPCR ++P +S LA  H  VVFLKVD+D+ N VA  W I+++PTF F++ G+ V K+VGADK +
Subjt:  EGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSA

Query:  LLKKIEE
        L +KI +
Subjt:  LLKKIEE

AT3G51030.1 thioredoxin H-type 12.2e-3460.75Show/hide
Query:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK
        +EEGQVIACH    W+  L KA ES  L+VVDFTASWCGPCR IAP+F++LAK  P V+FLKVD DEL +VA++W I AMPTF+F+K G+ + K+VGA K
Subjt:  AEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADK

Query:  SALLKKI
          L   I
Subjt:  SALLKKI

AT5G42980.1 thioredoxin 35.9e-3558.97Show/hide
Query:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD
        MA EG+VIACH   +W   L  A ES KLIV+DFTA+WC PCR IAP F++LAK H  VVF KVDVDELNTVA E+++ AMPTF+FMK GE    +VGA 
Subjt:  MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGAD

Query:  KSALLKKIEELKTPTAA
        K  ++  +E+ KT  AA
Subjt:  KSALLKKIEELKTPTAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAAGGGCAAGTGATCGCATGCCATAAGAAAGCTGAGTGGGATGCTCATTTAGCGAAAGCGAAGGAATCTGGAAAACTGATTGTTGTGGATTTTACTGCTTC
CTGGTGCGGGCCATGCCGTACAATTGCTCCATATTTCTCAGAATTGGCTAAGAATCATCCCGGTGTCGTTTTCCTGAAAGTGGACGTCGATGAATTGAACACTGTTGCTA
CCGAGTGGGAGATCAATGCAATGCCGACATTTGTTTTCATGAAACGAGGGGAAACAGTTCACAAGATTGTTGGTGCTGATAAATCGGCGCTGTTGAAAAAAATAGAAGAG
CTCAAGACTCCAACTGCTGCTACTACTTCTTCTACTGCTTAG
mRNA sequenceShow/hide mRNA sequence
CATACATATTCTTATTTTTCTACCCGAACCGAAAGAAAGGCGAAGGGTACTTACTGCCCACTGCTCGCTATATAAATACCTGCCCGTCGCCGTCTCCCTCCATCGCTGCA
GTTTTCTTATACGGATAAGACTTTTCGCAGGAAAGCGATTTCTGTGTATTCCAATGGCTGAAGAAGGGCAAGTGATCGCATGCCATAAGAAAGCTGAGTGGGATGCTCAT
TTAGCGAAAGCGAAGGAATCTGGAAAACTGATTGTTGTGGATTTTACTGCTTCCTGGTGCGGGCCATGCCGTACAATTGCTCCATATTTCTCAGAATTGGCTAAGAATCA
TCCCGGTGTCGTTTTCCTGAAAGTGGACGTCGATGAATTGAACACTGTTGCTACCGAGTGGGAGATCAATGCAATGCCGACATTTGTTTTCATGAAACGAGGGGAAACAG
TTCACAAGATTGTTGGTGCTGATAAATCGGCGCTGTTGAAAAAAATAGAAGAGCTCAAGACTCCAACTGCTGCTACTACTTCTTCTACTGCTTAGACACAATCAGCTTGG
AGGATGTGGCCTCGTTGATTAGTATGGTGCAATGATGCTTCTGTTTTCGAGTTTGATCTTCTTGTCAATTTCATACGTTGTGTCTATGATCTCCACGGTTTTGTTTTCCC
TAAAAGAAGTTGGATTATATGCAGAACTCTGAAAGATGATTCTGGTTCTTGTTATCTAGAACTTGCAGGTTTCAATGTGGAATAAATGGGGCTGGAATTTTTGTTGAATT
CTCAAGTCTCATGATTTACACATTCTACCAGCAGGCTTCCGTAAGATCTTGACTCTATTTCTTATCTAATTCTCCATGGATGATGTTGTTTCAGCTTATTCTCATAGTAA
CTAAGAAGAATTGTTTCCTATGAGAAGAATCGTCAACATACACTTGAATTCCGTTCATGTCTAATACATGTTTGAACTTTGAAACTTTTAATTCCATGTCTATCTCTTAT
GTTAAGGACTTTATAAACACGAAATTGAATGTAGACGTTCTACGAATATCATTAGTTGATTTTTAATCTATGGTTTACTGAAGAACAGGGTGGCTGTGTGGCCTCGATAG
AAGCACATCAGCGCATATGGAAAGGGGCTTCATATCCTGCAAGTTTTTCCCTTCTCTAGTCGTCGTCAAAAGAAAATAAATAATAATAATAATAATCATAATTCCCTAAA
GAATGAATTTTTTAGCTTTTGGTTTGATGTGGT
Protein sequenceShow/hide protein sequence
MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVVFLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEE
LKTPTAATTSSTA