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CmoCh12G004010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionnucleolar protein 14 isoform X1
Genome locationCmo_Chr12:2500711..2502009
RNA-Seq ExpressionCmoCh12G004010
SyntenyCmoCh12G004010
Gene Ontology termsGO:0030490 - maturation of SSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030692 - Noc4p-Nop14p complex (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007276 - Nucleolar protein 14


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064777.1 nucleolar protein 14 isoform X1 [Cucumis melo var. makuwa]3.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
KAG7020493.1 hypothetical protein SDJN02_17178 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1383.02Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFT
        ++K  E RIGLAR LAIGKRKMMLL EYEKSGKATEFSDERIGEWDEELG  T
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFT
XP_008445433.1 PREDICTED: nucleolar protein 14 isoform X1 [Cucumis melo]3.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
XP_011657408.1 nucleolar protein 14 isoform X1 [Cucumis sativus]3.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
XP_011657409.1 nucleolar protein 14 isoform X2 [Cucumis sativus]3.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
TrEMBL top hitse value%identityAlignment
A0A0A0KD89 Uncharacterized protein1.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
A0A1S3BC88 nucleolar protein 14 isoform X21.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
A0A1S3BDK2 nucleolar protein 14 isoform X11.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
A0A5A7VCP6 Nucleolar protein 14 isoform X11.9e-1173.21Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
        K+K  ERRIGLAR LAI KRK  LLKEYE+S K+TEFSD+RIGEWDEELG F  A+
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAV
A0A6J1KKH7 nucleolar protein 14 isoform X19.4e-1146.49Show/hide
Query:  MAKLSNLGSSNNEMKNKK------------------------------------------KSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERI
        MAKLSNL SSNN+ K+KK                                          K  ERRIGLAR LAI KRK  LL+EYE+SGK+TEFSD+RI
Subjt:  MAKLSNLGSSNNEMKNKK------------------------------------------KSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERI

Query:  GEWDEELGYFTFAV
        GE DEELG F  A+
Subjt:  GEWDEELGYFTFAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G69070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nop14-like protein (InterPro:IPR007276); Has 69842 Blast hits to 35213 proteins in 1572 species: Archae - 363; Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants - 2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI BLink).5.3e-0650Show/hide
Query:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYF
        K+K  ER + ++R  A+ KRK  L KEYE+S K++ F D+RIGE ++ELG F
Subjt:  KKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTTATCAAATCTTGGCTCAAGCAACAACGAAATGAAGAACAAGAAGAAGAGTGCTGAGCGTCGTATTGGCCTGGCTCGTTTACTCGCGATTGGAAAGAGGAA
AATGATGCTGTTGAAGGAGTACGAGAAAAGCGGTAAGGCTACGGAATTTTCCGATGAGCGAATTGGGGAATGGGACGAAGAGCTTGGCTATTTTACGTTCGCAGTGCGAA
TGGAAGAGATTCTATGGCATTCTTTTGCAATATTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGTTATCAAATCTTGGCTCAAGCAACAACGAAATGAAGAACAAGAAGAAGAGTGCTGAGCGTCGTATTGGCCTGGCTCGTTTACTCGCGATTGGAAAGAGGAA
AATGATGCTGTTGAAGGAGTACGAGAAAAGCGGTAAGGCTACGGAATTTTCCGATGAGCGAATTGGGGAATGGGACGAAGAGCTTGGCTATTTTACGTTCGCAGTGCGAA
TGGAAGAGATTCTATGGCATTCTTTTGCAATATTTTTCTAA
Protein sequenceShow/hide protein sequence
MAKLSNLGSSNNEMKNKKKSAERRIGLARLLAIGKRKMMLLKEYEKSGKATEFSDERIGEWDEELGYFTFAVRMEEILWHSFAIFF