; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G004440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmediator of RNA polymerase II transcription subunit 18
Genome locationCmo_Chr12:2729179..2733629
RNA-Seq ExpressionCmoCh12G004440
SyntenyCmoCh12G004440
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006369 - termination of RNA polymerase II transcription (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR005134 - Uncharacterised protein family UPF0114


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020537.1 hypothetical protein SDJN02_17222, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-12592.88Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATRLLRSVRPS+TVVSSSSSSSPSTAATVRCLGK GLNSKNGERLVTSGDGERRQIVNLK    AAAAPETVETETRELDLGSLLANLLVQLKNTAVK
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMF       
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRWNIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
              NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGG GGY
Subjt:  EKNPRWNIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

XP_022951147.1 uncharacterized protein LOC111454079 [Cucurbita moschata]5.4e-13995.58Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKNPRW             NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
Subjt:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

XP_023002007.1 uncharacterized protein LOC111496020 [Cucurbita maxima]3.6e-12790.51Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLK-AAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAV
        MAATRLLRSVRPSATVV SSSSSSPSTAA VRCL KTGLNSKNGERL+TSGDGERRQIVNLK AAAAAAAAPETVET+TRELDLGSLLANLLVQLKNTAV
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLK-AAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAV

Query:  KTKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM
        K KIRRRQIQKFIEKIII+CRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFN VSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM
Subjt:  KTKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM

Query:  TEKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        TEKN RW             NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEK KSIPLSSA DLACFAAAILI SASIFFLSRLNIGGG R GY
Subjt:  TEKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

XP_023538418.1 uncharacterized protein LOC111799204 [Cucurbita pepo subsp. pepo]9.9e-13391.84Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATRL RSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERL+TSGDGER+  VNLKAAAAAAAAPETVET+TRELDLGSLLANLLVQLKNT VK
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKN RW             NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSA DLACFA AILISSASIFFLSRLNIGGG RGGY
Subjt:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

XP_038885641.1 uncharacterized protein LOC120075956 [Benincasa hispida]1.1e-10775.17Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        M ATR ++ +RP++ V SSSSSSSPS+A TVRCLGKTGLN  NGERL+TSGDGER+QIV +K    AAAAP+TVET T EL+LGSLLANLLVQLK T  K
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKI+RRQIQKFIEKIIIDCRFFTL AVAGSLLGSILC++EGSFIVAESYLQYF+G+S+ S+++H VELLIE+LDMFLVGTALVVFGVGLFAMF+GS KM 
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKN-------------PRWNIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKN                 IPTWVEMES+S+AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+++SSASIFFLS+LN+GGGG GG+
Subjt:  EKN-------------PRWNIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

TrEMBL top hitse value%identityAlignment
A0A0A0LLC9 Uncharacterized protein3.4e-10773.47Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATR ++ VRP+A V +SSSSSSPS+   VR LGKTGLN  NGERL+TSG  ERRQ+V +K AAAA AAP+TVET+T ELDLGSL+ANLL+QLKNT  K
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKI++ +IQKFIEKIIIDCRFFTL AV+GSL+GSILC++EGSFIV ESYLQYF+G+S+R+D++H VELLIE+LDMFLVGTAL+VFG+GLFAMFVGSEKM 
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRWN-------------IPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        +KN +W+             IPTWVEMES+S AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+GGGG  G+
Subjt:  EKNPRWN-------------IPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

A0A1S3BAX1 uncharacterized protein LOC1034879362.1e-10472.45Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATR ++ VRP+A V SSSSSSSPS+   VR LGKTGLN  NGERL+TSG GE RQ++ +K   AA  AP+TVET+T ELDLGSL+++LLVQLK T  K
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKI++R+IQKFIEKIIIDCRFFTL AV+GSL+GSILC++EGSFIVAESYLQYF+ +S+R++++H VELLIE+LDMFLVGTALVVFG+GLFAMFVGSEKM 
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKN +W              IPTWVEMES+S AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+G GG GG+
Subjt:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

A0A5A7VG09 UPF0114 domain-containing protein2.1e-10472.79Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATR ++ VRP+A V SSSSSSSPS+   VR LGKTGLN  NGERL+TSG GE RQ+V +K   AA  AP+TVET+T ELDLGSL+++LLVQLK T  K
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKI++R+IQKFIEKIIIDCRFFTL AV+GSL+GSILC++EGSFIVAESYLQYF+ +S+R++++H VELLIE+LDMFLVGTALVVFG+GLFAMFVGSEKM 
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKN +W              IPTWVEMES+S AKSKIGHAVMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+G GG GG+
Subjt:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

A0A6J1GGV4 uncharacterized protein LOC1114540792.6e-13995.58Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
        MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVK

Query:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
        TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT
Subjt:  TKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMT

Query:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        EKNPRW             NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
Subjt:  EKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

A0A6J1KI88 uncharacterized protein LOC1114960201.8e-12790.51Show/hide
Query:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLK-AAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAV
        MAATRLLRSVRPSATVV SSSSSSPSTAA VRCL KTGLNSKNGERL+TSGDGERRQIVNLK AAAAAAAAPETVET+TRELDLGSLLANLLVQLKNTAV
Subjt:  MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLK-AAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAV

Query:  KTKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM
        K KIRRRQIQKFIEKIII+CRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFN VSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM
Subjt:  KTKIRRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKM

Query:  TEKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY
        TEKN RW             NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEK KSIPLSSA DLACFAAAILI SASIFFLSRLNIGGG R GY
Subjt:  TEKNPRW-------------NIPTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY

SwissProt top hitse value%identityAlignment
Q9SJZ6 Mediator of RNA polymerase II transcription subunit 185.9e-7276.27Show/hide
Query:  SGISPSAVASEVRIMCDLEQTEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLK
        SG +   V+SEVR++CDL+Q EP+WTVKH+GGAMRG+GA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGF+F F R  HI+V+VSSVNKM K
Subjt:  SGISPSAVASEVRIMCDLEQTEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLK

Query:  LHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        +H+ DEAVPVTPG+Q+V+VTAPATSENYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Subjt:  LHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM

Arabidopsis top hitse value%identityAlignment
AT2G22370.1 unknown protein4.2e-7376.27Show/hide
Query:  SGISPSAVASEVRIMCDLEQTEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLK
        SG +   V+SEVR++CDL+Q EP+WTVKH+GGAMRG+GA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGF+F F R  HI+V+VSSVNKM K
Subjt:  SGISPSAVASEVRIMCDLEQTEPSWTVKHIGGAMRGSGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLK

Query:  LHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM
        +H+ DEAVPVTPG+Q+V+VTAPATSENYSEVA AVS+FCE+LAPL+HLSKP ISTGVVPTAAAAAASL+SDG GTT+
Subjt:  LHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM

AT4G19390.1 Uncharacterised protein family (UPF0114)4.0e-3138.59Show/hide
Query:  RRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMTEKN
        R   +++ IEK+I  CRF T     GSLLGS+LCF++G   V +S+LQY   V+R       + LL+E++D++L+GT ++VFG+GL+ +F+ +   +E  
Subjt:  RRRQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMTEKN

Query:  PRWNI---------------PTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLN
            +               P W+E++SVSE K+K+GH ++M+L +G+ +K K + ++S TDL C + +I  SSA +F LSRLN
Subjt:  PRWNI---------------PTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLN

AT5G13720.1 Uncharacterised protein family (UPF0114)2.5e-2532.61Show/hide
Query:  RQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVG---------S
        R  +  +E+II D RF  L AV GSL GS+LCFL G   + E+Y  Y+   S+       V  L+E++D++L GT +++F +GL+ +F+          S
Subjt:  RQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVG---------S

Query:  EKMTEKNPRWNI------PTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIG
        ++    +  + +      P W+++ S+ E K+K+GH ++MIL V + E+ K + +++  DL  ++  I +SSAS++ L  L+ G
Subjt:  EKMTEKNPRWNI------PTWVEMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACTCGATTGCTCCGGTCGGTTCGGCCTTCTGCCACCGTGGTGTCTTCTTCTTCTTCATCATCGCCATCCACGGCGGCGACTGTGAGGTGCTTGGGCAAAAC
AGGGCTAAATTCAAAAAATGGCGAACGGTTAGTAACCTCCGGCGACGGTGAGAGAAGACAGATAGTCAACCTTAAGGCGGCGGCGGCGGCGGCGGCGGCTCCAGAGACTG
TGGAGACAGAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGAACACGGCGGTGAAGACAAAGATTCGGAGGCGACAGATTCAGAAA
TTCATCGAAAAGATCATAATCGACTGCCGATTCTTTACATTATTCGCCGTCGCCGGATCTTTACTGGGTTCGATTCTATGTTTCCTTGAGGGGAGCTTTATTGTTGCAGA
GTCATATCTGCAGTACTTTAATGGCGTTTCACGGAGGTCCGACGAGAGTCATGCGGTGGAGCTTCTAATTGAATCATTAGACATGTTCTTGGTCGGAACTGCTCTGGTTG
TTTTCGGTGTCGGATTGTTCGCGATGTTCGTCGGATCGGAGAAGATGACGGAAAAGAACCCGCGGTGGAACATTCCGACATGGGTGGAAATGGAATCCGTGTCGGAGGCA
AAATCGAAGATCGGACACGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAGAAGTTCAAGAGTATACCTTTGAGCTCCGCCACCGATCTCGCCTGTTTCGCCGCCGC
CATTCTGATTTCCTCCGCCTCTATCTTCTTCCTCTCCAGACTCAACATAGGCGGCGGCGGCCGCGGCGGTTACAATTCTTCTGATTTCAAACCAGTGATTGATACTAGTG
GCATTTCTCCAAGTGCTGTGGCTTCGGAGGTTCGAATCATGTGTGACCTCGAGCAGACGGAACCGTCGTGGACTGTTAAACATATTGGAGGGGCAATGAGAGGTTCAGGT
GCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAACGTGCTTCGTTTATTCTATGCGCTTGGCTATAAGTTAGACCATGAGCTGCTGAG
AGTTGGGTTTTCTTTCCGATTCCACCGGGGCACTCATATAACAGTGACGGTTTCTTCAGTTAATAAGATGTTGAAGCTTCATTCGACCGATGAGGCTGTACCTGTAACAC
CTGGTATACAGCTAGTTGAAGTGACAGCCCCAGCAACTTCTGAAAACTACTCCGAAGTAGCCGGTGCAGTGTCAACGTTCTGTGAATATCTTGCACCGCTGCTGCATTTG
TCAAAACCTGGAATATCCACAGGTGTTGTTCCTACAGCTGCTGCCGCTGCAGCATCTCTCCTCTCTGATGGCGCGGGAACGACAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACTCGATTGCTCCGGTCGGTTCGGCCTTCTGCCACCGTGGTGTCTTCTTCTTCTTCATCATCGCCATCCACGGCGGCGACTGTGAGGTGCTTGGGCAAAAC
AGGGCTAAATTCAAAAAATGGCGAACGGTTAGTAACCTCCGGCGACGGTGAGAGAAGACAGATAGTCAACCTTAAGGCGGCGGCGGCGGCGGCGGCGGCTCCAGAGACTG
TGGAGACAGAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTACTCGTTCAATTGAAGAACACGGCGGTGAAGACAAAGATTCGGAGGCGACAGATTCAGAAA
TTCATCGAAAAGATCATAATCGACTGCCGATTCTTTACATTATTCGCCGTCGCCGGATCTTTACTGGGTTCGATTCTATGTTTCCTTGAGGGGAGCTTTATTGTTGCAGA
GTCATATCTGCAGTACTTTAATGGCGTTTCACGGAGGTCCGACGAGAGTCATGCGGTGGAGCTTCTAATTGAATCATTAGACATGTTCTTGGTCGGAACTGCTCTGGTTG
TTTTCGGTGTCGGATTGTTCGCGATGTTCGTCGGATCGGAGAAGATGACGGAAAAGAACCCGCGGTGGAACATTCCGACATGGGTGGAAATGGAATCCGTGTCGGAGGCA
AAATCGAAGATCGGACACGCGGTGATGATGATACTGCAAGTGGGTGTGTTGGAGAAGTTCAAGAGTATACCTTTGAGCTCCGCCACCGATCTCGCCTGTTTCGCCGCCGC
CATTCTGATTTCCTCCGCCTCTATCTTCTTCCTCTCCAGACTCAACATAGGCGGCGGCGGCCGCGGCGGTTACAATTCTTCTGATTTCAAACCAGTGATTGATACTAGTG
GCATTTCTCCAAGTGCTGTGGCTTCGGAGGTTCGAATCATGTGTGACCTCGAGCAGACGGAACCGTCGTGGACTGTTAAACATATTGGAGGGGCAATGAGAGGTTCAGGT
GCTGAACAACTCTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAACGTGCTTCGTTTATTCTATGCGCTTGGCTATAAGTTAGACCATGAGCTGCTGAG
AGTTGGGTTTTCTTTCCGATTCCACCGGGGCACTCATATAACAGTGACGGTTTCTTCAGTTAATAAGATGTTGAAGCTTCATTCGACCGATGAGGCTGTACCTGTAACAC
CTGGTATACAGCTAGTTGAAGTGACAGCCCCAGCAACTTCTGAAAACTACTCCGAAGTAGCCGGTGCAGTGTCAACGTTCTGTGAATATCTTGCACCGCTGCTGCATTTG
TCAAAACCTGGAATATCCACAGGTGTTGTTCCTACAGCTGCTGCCGCTGCAGCATCTCTCCTCTCTGATGGCGCGGGAACGACAATGTAGATGGTTTGCTTTGATGTCAG
CAGTTTTTCAAGCTGAACTCCGATCATTTTCTCGTCCATGAAGCTCTGCATCCGTTCCCTTTCGTGCCTTGAAGCTCCCGGTTTGGATACGATGGAAAAATAGGAAAAAC
GGTGTGAATGATCGATCTGCTGATGCTGCGTATCTGAATTCTGGACAAATAAGTTCAATCTAAAAACCATTTTTGCGTAGTTGGTATATAGAATGTTAGTTGTTGAAGGT
AATATGCCTTGTGTTCATGTCTCAAAGATAATATGGAGGCTTATATTTATGAAGCATTTCGAATTTGGGATTTTCTGGTGTACTCTGTCTTCTACATTTTTATACAGCAT
TTGAATAACTCAATGGAAAATATCAATTTAG
Protein sequenceShow/hide protein sequence
MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVNLKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQK
FIEKIIIDCRFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGTALVVFGVGLFAMFVGSEKMTEKNPRWNIPTWVEMESVSEA
KSKIGHAVMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGYNSSDFKPVIDTSGISPSAVASEVRIMCDLEQTEPSWTVKHIGGAMRGSG
AEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFSFRFHRGTHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSENYSEVAGAVSTFCEYLAPLLHL
SKPGISTGVVPTAAAAAASLLSDGAGTTM