CuGenDBv2

Gene ID	CmoCh12G004560
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Thioredoxin domain-containing protein
Genome location	Cmo_Chr12:2792351..2795835
RNA-Seq Expression	CmoCh12G004560
Synteny	CmoCh12G004560
Gene Ontology terms	GO:0006396 - RNA processing (biological process) GO:0045454 - cell redox homeostasis (biological process) GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR013766 - Thioredoxin domain IPR036249 - Thioredoxin-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6585642.1 hypothetical protein SDJN03_18375, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-115

97.61

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWD+NPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDN+QQPPC
Subjt:  SDNKQQPPC

XP_022144394.1 uncharacterized protein LOC111014082 [Momordica charantia]

1.6e-90

80.29

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQP FCFKWPWD +PKNP DC FEGPWLFKSLQNVG FA NF+N+VSKSSPP +NAFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+AL
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        ASGKEATVIEFYSPKC LC+SLL  V +MEARNS WL+IVMADAEN+KWLPELLHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHLL LKRP 
Subjt:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLPGSDNK
        +L GS NK
Subjt:  TLPGSDNK

XP_022951826.1 uncharacterized protein LOC111454558 [Cucurbita moschata]

1.8e-118

100

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

XP_023002017.1 uncharacterized protein LOC111496027 [Cucurbita maxima]

3.2e-115

97.13

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWD+NPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALA GK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPE+LHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

XP_023537358.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo]

8.3e-116

97.61

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWDMNPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALASGK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARN+QWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BAS7 uncharacterized protein LOC103487919

3.9e-87

80.3

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQPLFCFKWPWD++ KN SDC FEGPWLFKSLQNVG FA NF+N+VSKSSPP +  FKPL F+    GNKIS+SRK L+PEEQGEAENRA AAAL
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        ASGKEATVIEFYSPKC LC+SLL  V ++EARNS WLNIVMADAENDKWLPELLHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHL+KLK P 
Subjt:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLP
        + P
Subjt:  TLP

A0A5A7TE38 Thioredoxin-like protein

9.7e-86

79.31

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQPLFCFKWPWD++ +N SDC FEGPWLFKSLQNVG FA NF+N+VSKSSP  +  FKPL F+    GNKIS+SRK L+PEEQGEAENRA AAAL
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        ASGKEATVIEFYSPKC LC+SLL  V ++EARNS WLNIVMADAENDKWLPELLHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHL+KLK P 
Subjt:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLP
        + P
Subjt:  TLP

A0A6J1CS67 uncharacterized protein LOC111014082

7.7e-91

80.29

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL
        M STPKQP FCFKWPWD +PKNP DC FEGPWLFKSLQNVG FA NF+N+VSKSSPP +NAFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+AL
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAAL

Query:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT
        ASGKEATVIEFYSPKC LC+SLL  V +MEARNS WL+IVMADAEN+KWLPELLHYDI YVPCFV+LDK GKALAKTGIPSSRLHVIAGLSHLL LKRP 
Subjt:  ASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPT

Query:  TLPGSDNK
        +L GS NK
Subjt:  TLPGSDNK

A0A6J1GJW7 uncharacterized protein LOC111454558

8.7e-119

100

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

A0A6J1KP92 uncharacterized protein LOC111496027

1.5e-115

97.13

Show/hide

Query:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK
        MRSTPKQPLFCFKWPWD+NPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALA GK
Subjt:  MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGK

Query:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
        EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPE+LHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG
Subjt:  EATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPG

Query:  SDNKQQPPC
        SDNKQQPPC
Subjt:  SDNKQQPPC

SwissProt top hits

e value

%identity

Alignment

P35088 Thiol:disulfide interchange protein TxlA

1.2e-08

38.46

Show/hide

Query:  VIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGK
        ++EFY+  C  C ++ G +  ++   S  L+ VM + +NDKWLPE+L Y++  +P FV L+ QG+
Subjt:  VIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGK

P73920 Thiol:disulfide interchange protein TxlA homolog

7.1e-09

34.57

Show/hide

Query:  AAALASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKT
        A AL +G+  T++EFY+  C  C ++   + +++      +N  M + +N+KWLPE+L Y +  +P FV LD  G A+A++
Subjt:  AAALASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKT

Arabidopsis top hits

e value

%identity

Alignment

AT5G06430.1 Thioredoxin superfamily protein

2.3e-63

61.22

Show/hide

Query:  STPKQPLFCFKWPWDMN--PKNPSD-CLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASG
        ST K P FC KWPWD N  PK+ S  C F+GPWLF+S+Q +G  A + L    ++       F+P           +K LS  EQGEAE RAFAAALAS 
Subjt:  STPKQPLFCFKWPWDMN--PKNPSD-CLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASG

Query:  KEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRP
        KEATV+EFYS KC LC+SLL FV ++E RNS WL+I MADAEN+KW PELLHYD+ YVPCFV+LDK G+ALAKTG+PSSR HVIAG+SHLLK+KRP
Subjt:  KEATVIEFYSPKCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGCGTTCGACACCGAAACAGCCTCTCTTTTGCTTCAAATGGCCATGGGACATGAACCCTAAAAATCCTTCAGACTGTTTATTTGAGGGTCCTTGGCTGTTCAAATCACT
GCAAAATGTGGGTGTCTTTGCTGCCAATTTCTTAAACGAAGTTTCAAAGTCATCACCTCCACGGGTCAATGCTTTTAAACCATTGTCGTTTGATGGAAATAAGATATCTA
AGTCTAGAAAAAAGCTAAGTCCTGAAGAGCAAGGAGAGGCAGAAAATAGGGCATTTGCAGCAGCGTTAGCCAGTGGGAAAGAAGCCACCGTCATTGAGTTCTACTCGCCC
AAATGTCCTCTGTGCAGTTCATTGCTTGGTTTTGTTACGCAGATGGAGGCAAGGAATTCACAATGGCTTAACATTGTGATGGCCGATGCAGAGAATGATAAATGGCTGCC
TGAGCTTCTTCATTATGATATTAGTTATGTTCCTTGCTTCGTGATTTTGGACAAACAAGGCAAGGCGCTAGCAAAGACGGGTATTCCAAGCAGTCGGCTTCATGTAATTG
CAGGACTTTCTCATCTTCTCAAACTGAAGCGCCCGACAACACTCCCTGGATCAGATAATAAGCAGCAGCCACCATGTTGAAAACAGACATTTGGAACAAACGGCATGGGT
CGTTGCAAAAATGGTACTAGAATGAAACATCTTCCTAATAAGATGTGGTTCGCGACAAACTAAGGCAAGAATTGGTAAGTATATGACACCCGAGTAAAGGTGGATACATG
AATGAATTGAATCTACATCTGAATGAGAGCAATCATGAGGATATAGTGATCAAGGCTTAAAAGAATCGAAAGTCACTACCTATATGAACAAAGTGCAACTTCCTTTACAT
TGGTTCAATCACAAGAGCAATTATATGTTGGGTATATGAACAAAGTGCACTTTTCCTTTACAATGGCTCACAAGAGCAATTATATATCGGGTAACCTCTTAAGAATTTTT
TTAGGATGCATGCGAGTGAGGATAAAATATGCTAGAATGACTTCTATTTGTTTGTGGAATAGTCTTCACCACTCTTAAGAAGCGAGTAGTAGGTAATATGATCATGTTGC
GGGAGAATGTCGGAACTATTAGGTGTCAAATCTGAATTCTAAATTTTAGACATGAGTCGTCACAAGTTGATTCGGTCTAGCTTCGGTCTAGCGATGAAAATGTGACTCAT
TCCACCCACCAAATTTCTAATTCAATGATAGAGAAATTAAATGGTGAGAGAGATGGCTGAAGTAGAGAAATTGAATGGTGAGAGAGATGGCTGAAAGGACCAAAGGAAGA
AGGTGAATGTTTGATTCTTCAGCAGCATTAATTCATGTTGACTGAATAACAGCTGACAGTTACTTGTGATTATCGCATTCAATGTGCTCGCTGCTCGCTGCCAACATTGC
CTGTCCTTAACTGCCCTCTAAAGGTATGCTTCCATTTTCAACTAAATTTGGTCTAAAAATTTGAT

Protein sequence

Show/hide protein sequence

MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVNAFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSP
KCPLCSSLLGFVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDNKQQPPC

CmoCh12G004560 (gene) of Cucurbita moschata (Rifu) v1 genome