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CmoCh12G004740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like protein 12
Genome locationCmo_Chr12:2894406..2894894
RNA-Seq ExpressionCmoCh12G004740
SyntenyCmoCh12G004740
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951114.1 uncharacterized protein LOC111454058 [Cucurbita moschata]2.0e-4769.75Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDK+       +L+ +ELQFF RDVR STQLNNR+ILS IPKTNDN AHM SSN H NSKIEIQDKATKS  KV SEK S  PLSRE+IKKIFKYY+
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN YYRAQYALDFAD NNDGLISEDEL+KLIDY  KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

XP_022951743.1 uncharacterized protein LOC111454484 [Cucurbita moschata]2.5e-5070.99Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDK+       +L+K+ELQFF RDVR STQLNNR+ILS IPKTNDN AHM SSN H NSKI++QDKATKS  KVFSEK SDE LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GS+N YYRAQYALD+ADANNDGLISEDEL+KLIDYA KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

XP_023002691.1 probable calcium-binding protein CML11 [Cucurbita maxima]1.0e-4366.05Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDKN       +L+KEELQ FLRDVR STQLN +  LS IPKTND  AH  SSNTH N KI++QDK TKS  KV SEK S+  LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN +Y+AQYA+ FADANNDGLISE ELEKLIDYACKII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

XP_023002692.1 probable calcium-binding protein CML14 [Cucurbita maxima]2.7e-4465.43Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYD+N       +L+K+ELQ FLRDVR STQLNN+  LS IPKTNDNVAH  SSN H N K+++Q+KATKS  KVFSE  SD  LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN +Y+AQYA+ FADANNDG+ISE ELEKLIDYACKII KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

XP_023002693.1 calmodulin-like protein 12 [Cucurbita maxima]7.1e-4566.67Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        +KK+DKN       +LSKEELQFFLRDVRRSTQLNNR+ILS I KTNDN AHM SSN H  SKI++QDKAT+   KV S K SD PL+RE+IKKIFK YD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        S+KD               GS+N YYRAQYALD+ADANNDGLISEDE +KLIDYA KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

TrEMBL top hitse value%identityAlignment
A0A6J1GGN5 uncharacterized protein LOC1114540589.6e-4869.75Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDK+       +L+ +ELQFF RDVR STQLNNR+ILS IPKTNDN AHM SSN H NSKIEIQDKATKS  KV SEK S  PLSRE+IKKIFKYY+
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN YYRAQYALDFAD NNDGLISEDEL+KLIDY  KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

A0A6J1GIK4 uncharacterized protein LOC1114544841.2e-5070.99Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDK+       +L+K+ELQFF RDVR STQLNNR+ILS IPKTNDN AHM SSN H NSKI++QDKATKS  KVFSEK SDE LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GS+N YYRAQYALD+ADANNDGLISEDEL+KLIDYA KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

A0A6J1KK82 probable calcium-binding protein CML141.3e-4465.43Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYD+N       +L+K+ELQ FLRDVR STQLNN+  LS IPKTNDNVAH  SSN H N K+++Q+KATKS  KVFSE  SD  LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN +Y+AQYA+ FADANNDG+ISE ELEKLIDYACKII KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

A0A6J1KM01 probable calcium-binding protein CML114.9e-4466.05Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        MKKYDKN       +L+KEELQ FLRDVR STQLN +  LS IPKTND  AH  SSNTH N KI++QDK TKS  KV SEK S+  LSRE+IKKIFKYYD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        SDKD               GSIN +Y+AQYA+ FADANNDGLISE ELEKLIDYACKII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

A0A6J1KUB3 calmodulin-like protein 123.4e-4566.67Show/hide
Query:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD
        +KK+DKN       +LSKEELQFFLRDVRRSTQLNNR+ILS I KTNDN AHM SSN H  SKI++QDKAT+   KV S K SD PL+RE+IKKIFK YD
Subjt:  MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYD

Query:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK
        S+KD               GS+N YYRAQYALD+ADANNDGLISEDE +KLIDYA KII+KK
Subjt:  SDKD---------------GSINLYYRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTATGACAAAAACGAGAAATTTTATCCGTGCTATTTGCTCAGTAAAGAAGAGCTACAATTCTTTCTCCGTGATGTTCGAAGATCAACTCAACTCAACAATCG
AAAAATTTTATCTATGATCCCAAAGACAAACGACAATGTTGCACACATGTTTAGCTCAAATACTCATATAAACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCC
CGGCAAAAGTTTTTAGTGAAAAGACATCTGATGAGCCACTTAGTCGAGAGAAAATAAAGAAAATTTTCAAATATTACGACAGCGACAAAGATGGCTCAATTAATCTATAC
TACAGGGCTCAATACGCTTTGGATTTTGCTGATGCTAATAATGATGGTCTTATCAGTGAAGATGAGCTTGAAAAACTCATAGATTATGCCTGTAAAATCATCCAGAAAAA
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTATGACAAAAACGAGAAATTTTATCCGTGCTATTTGCTCAGTAAAGAAGAGCTACAATTCTTTCTCCGTGATGTTCGAAGATCAACTCAACTCAACAATCG
AAAAATTTTATCTATGATCCCAAAGACAAACGACAATGTTGCACACATGTTTAGCTCAAATACTCATATAAACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCC
CGGCAAAAGTTTTTAGTGAAAAGACATCTGATGAGCCACTTAGTCGAGAGAAAATAAAGAAAATTTTCAAATATTACGACAGCGACAAAGATGGCTCAATTAATCTATAC
TACAGGGCTCAATACGCTTTGGATTTTGCTGATGCTAATAATGATGGTCTTATCAGTGAAGATGAGCTTGAAAAACTCATAGATTATGCCTGTAAAATCATCCAGAAAAA
ATGA
Protein sequenceShow/hide protein sequence
MKKYDKNEKFYPCYLLSKEELQFFLRDVRRSTQLNNRKILSMIPKTNDNVAHMFSSNTHINSKIEIQDKATKSPAKVFSEKTSDEPLSREKIKKIFKYYDSDKDGSINLY
YRAQYALDFADANNDGLISEDELEKLIDYACKIIQKK