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CmoCh12G004760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like protein 12
Genome locationCmo_Chr12:2900390..2900917
RNA-Seq ExpressionCmoCh12G004760
SyntenyCmoCh12G004760
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951114.1 uncharacterized protein LOC111454058 [Cucurbita moschata]2.0e-7791.43Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYYNSDKD               GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

XP_022951743.1 uncharacterized protein LOC111454484 [Cucurbita moschata]1.2e-6983.43Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        M VSNLQAWAENEANELMKKYDKDGDGMLN QELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAH+NSKI++QDKATKSSTKV SEKAS   L
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GS+NPYYRAQYALD+AD NNDGLISEDELDKLIDY SKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

XP_022951798.1 probable calcium-binding protein CML11 [Cucurbita moschata]6.1e-5872Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVS LQAWAENEANELMKKYD++GDG+L  +ELQ F RDVRGSTQLN++  LSKIPKTND  AH LSSNAH+N KI++Q  ATKSSTKVLSEK S+VPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GSINP+Y+AQYA+ FAD NNDGLISE EL+KLIDY  KIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

XP_023002693.1 calmodulin-like protein 12 [Cucurbita maxima]1.7e-6074.86Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVSNLQAWAE+EANEL+KK+DK+GDG+L+ +ELQFF RDVR STQLNNREILSKI KTNDNAAHMLSSN H+ SKI++QDKAT+ STKVLS KAS VPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        +REQIKKIFK Y+S+KD               GS+NPYYRAQYALD+AD NNDGLISEDE DKLIDY SKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

XP_023538396.1 probable calcium-binding protein CML11 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-5770.86Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVS LQAWAENEANELMKKYD++GDG+L  +ELQFF RDVRGSTQLNN+  LSKIPKTND  AH LSSNAH+N KI++Q KAT SSTKV  EK S+VPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GSINP+Y+AQYA+ FAD NNDGLISE EL+KL+DY  KII+KK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

TrEMBL top hitse value%identityAlignment
A0A6J1GGN5 uncharacterized protein LOC1114540589.7e-7891.43Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYYNSDKD               GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

A0A6J1GIK4 uncharacterized protein LOC1114544845.7e-7083.43Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        M VSNLQAWAENEANELMKKYDKDGDGMLN QELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAH+NSKI++QDKATKSSTKV SEKAS   L
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GS+NPYYRAQYALD+AD NNDGLISEDELDKLIDY SKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

A0A6J1GIQ8 probable calcium-binding protein CML112.9e-5872Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVS LQAWAENEANELMKKYD++GDG+L  +ELQ F RDVRGSTQLN++  LSKIPKTND  AH LSSNAH+N KI++Q  ATKSSTKVLSEK S+VPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GSINP+Y+AQYA+ FAD NNDGLISE EL+KLIDY  KIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

A0A6J1KM01 probable calcium-binding protein CML113.2e-5771.43Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVS LQ WAENEANELMKKYDK+GDG+L  +ELQ F RDVRGSTQLN +  LSKIPKTND  AH LSSN H+N KI++QDK TKSSTKVLSEK S+V L
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        SREQIKKIFKYY+SDKD               GSINP+Y+AQYA+ FAD NNDGLISE EL+KLIDY  KIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

A0A6J1KUB3 calmodulin-like protein 128.2e-6174.86Show/hide
Query:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL
        MSVSNLQAWAE+EANEL+KK+DK+GDG+L+ +ELQFF RDVR STQLNNREILSKI KTNDNAAHMLSSN H+ SKI++QDKAT+ STKVLS KAS VPL
Subjt:  MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPL

Query:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK
        +REQIKKIFK Y+S+KD               GS+NPYYRAQYALD+AD NNDGLISEDE DKLIDY SKIIKKK
Subjt:  SREQIKKIFKYYNSDKD---------------GSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTCTCCAATCTCCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAAAGACGGTGATGGCATGCTCAATAATCAAGAGTTACAATTCTT
TTTCCGTGATGTTCGAGGATCAACTCAACTCAACAATCGAGAAATTTTATCTAAGATCCCAAAGACAAACGACAACGCTGCACACATGTTAAGCTCAAATGCTCATTCAA
ACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCTCGACAAAAGTCCTTAGTGAAAAGGCATCTCATGTGCCACTTAGTAGAGAGCAAATAAAGAAAATTTTCAAA
TATTACAACAGCGACAAAGATGGCTCAATTAATCCATATTACAGGGCTCAATACGCTTTGGATTTTGCTGACGATAATAATGATGGTCTTATCAGTGAAGATGAGCTTGA
CAAACTCATAGATTATGTCAGTAAAATCATCAAGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTCTCCAATCTCCAAGCTTGGGCTGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAAAGACGGTGATGGCATGCTCAATAATCAAGAGTTACAATTCTT
TTTCCGTGATGTTCGAGGATCAACTCAACTCAACAATCGAGAAATTTTATCTAAGATCCCAAAGACAAACGACAACGCTGCACACATGTTAAGCTCAAATGCTCATTCAA
ACTCAAAGATAGAAATACAAGACAAAGCTACAAAATCCTCGACAAAAGTCCTTAGTGAAAAGGCATCTCATGTGCCACTTAGTAGAGAGCAAATAAAGAAAATTTTCAAA
TATTACAACAGCGACAAAGATGGCTCAATTAATCCATATTACAGGGCTCAATACGCTTTGGATTTTGCTGACGATAATAATGATGGTCTTATCAGTGAAGATGAGCTTGA
CAAACTCATAGATTATGTCAGTAAAATCATCAAGAAGAAATGA
Protein sequenceShow/hide protein sequence
MSVSNLQAWAENEANELMKKYDKDGDGMLNNQELQFFFRDVRGSTQLNNREILSKIPKTNDNAAHMLSSNAHSNSKIEIQDKATKSSTKVLSEKASHVPLSREQIKKIFK
YYNSDKDGSINPYYRAQYALDFADDNNDGLISEDELDKLIDYVSKIIKKK