CuGenDBv2

Gene ID	CmoCh12G004790
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	calmodulin-like protein 12
Genome location	Cmo_Chr12:2925327..2925854
RNA-Seq Expression	CmoCh12G004790
Synteny	CmoCh12G004790
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022951742.1 probable calcium-binding protein CML11 [Cucurbita moschata]

1.9e-89

100

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

XP_022951798.1 probable calcium-binding protein CML11 [Cucurbita moschata]

4.3e-81

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAEN+ANEL+KKYD+NGDGVLTKEELQVFLRDVRGSTQLN+Q FLSKIP+TNDKGAH+L+SN  TNPKIQVQ  ATKSSTKVLSEKVSNVPL
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLN REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA KIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

XP_022951799.1 probable calcium-binding protein CML11 [Cucurbita moschata]

1.8e-79

90.17

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Query:  VSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSR
        +SIL+AWAEN+ANEL+KKYD+NGDGVLTKEELQVFLRDVRGSTQLN+QGFLSKIP+TNDKGAH+L+SN  TN KIQVQ K TKSSTKVLSEK+SNVPLSR
Subjt:  VSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSR

Query:  EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYA KIIKKK
Subjt:  EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

XP_023002691.1 probable calcium-binding protein CML11 [Cucurbita maxima]

2.5e-81

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQ WAEN+ANEL+KKYDKNGDG+LTKEELQVFLRDVRGSTQLN QGFLSKIP+TNDKGAHKL+SN  TNPKIQVQ K TKSSTKVLSEKVSNV L
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYA KIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

XP_023538396.1 probable calcium-binding protein CML11 isoform X1 [Cucurbita pepo subsp. pepo]

9.5e-81

90.86

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAEN+ANEL+KKYD+NGDGVLTKEELQ FLRDVRGSTQLNNQGFLSKIP+TNDKGAHKL+SN  TNPKIQVQ KAT SSTKV  EKVSNVPL
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLN REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKL+DYA KII+KK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GII5 probable calcium-binding protein CML11

9.3e-90

100

Show/hide

Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

A0A6J1GIQ8 probable calcium-binding protein CML11

2.1e-81

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAEN+ANEL+KKYD+NGDGVLTKEELQVFLRDVRGSTQLN+Q FLSKIP+TNDKGAH+L+SN  TNPKIQVQ  ATKSSTKVLSEKVSNVPL
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLN REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA KIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

A0A6J1GJT8 probable calcium-binding protein CML11

8.7e-80

90.17

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Query:  VSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSR
        +SIL+AWAEN+ANEL+KKYD+NGDGVLTKEELQVFLRDVRGSTQLN+QGFLSKIP+TNDKGAH+L+SN  TN KIQVQ K TKSSTKVLSEK+SNVPLSR
Subjt:  VSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSR

Query:  EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYA KIIKKK
Subjt:  EQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

A0A6J1KK48 probable calcium-binding protein CML14

9.6e-79

89.71

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQAWAEN+ANEL+KKYD+NGDGVLTKEELQVF RDVRGSTQLNNQGFLS IP+TNDKGA+KL+SN  TNPKIQVQ KATKSSTK  SEKVSNV L
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTF DANND LI+EAELEKLIDYA KIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

A0A6J1KM01 probable calcium-binding protein CML11

1.2e-81

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Query:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL
        MSVSILQ WAEN+ANEL+KKYDKNGDG+LTKEELQVFLRDVRGSTQLN QGFLSKIP+TNDKGAHKL+SN  TNPKIQVQ K TKSSTKVLSEKVSNV L
Subjt:  MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPL

Query:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK
        SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYA KIIKKK
Subjt:  SREQIKKIFKYYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

SwissProt top hits

e value

%identity

Alignment

Q9AWK2 Probable calcium-binding protein CML11

6.8e-05

25.49

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Query:  ELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSD
        E+ + +D+NGDG LT+ EL   LR             L   P T++  +    ++  +N  I+        + ++L ++    P S +QI+++F  +D D
Subjt:  ELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSD

Query:  KDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA
         +GF+   E+  + + LG      +    +  AD + DG IS  E  + I  A
Subjt:  KDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA

Q9LQN4 Probable calcium-binding protein CML17

3.0e-05

24.84

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Query:  NKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKY
        N+  E+ + +D+N DG LT+ EL   LR +    + +   F + I + + K          +N  ++        S ++LS      P + EQ+ ++F+ 
Subjt:  NKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKY

Query:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA
        +D+D +GF+   E+  + + LG      +    +  AD++ DG I+  E  K I+ A
Subjt:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA

Arabidopsis top hits

e value

%identity

Alignment

AT1G32250.1 Calcium-binding EF-hand family protein

2.2e-06

24.84

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Query:  NKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKY
        N+  E+ + +D+N DG LT+ EL   LR +    + +   F + I + + K          +N  ++        S ++LS      P + EQ+ ++F+ 
Subjt:  NKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKY

Query:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA
        +D+D +GF+   E+  + + LG      +    +  AD++ DG I+  E  K I+ A
Subjt:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA

AT2G41100.3 Calcium-binding EF hand family protein

5.3e-05

25.5

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Query:  ELIKKYDKNGDGVLTKEELQVFLRDV-RGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQI---KKIFKY
        E  + +DKNGDG +TK+EL+  +  + +  T+ + Q  ++++    D G            K Q   +A + + K + +      L+ +QI   ++ F+ 
Subjt:  ELIKKYDKNGDGVLTKEELQVFLRDV-RGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQI---KKIFKY

Query:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAE
        +D + DG++ + E+      LG      + Q  +  ADA+ DG IS +E
Subjt:  YDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATAAAGCAAATGAATTGATCAAGAAGTATGACAAAAACGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTT
TCTTCGTGATGTTCGAGGATCAACTCAACTCAACAATCAAGGGTTTTTATCTAAGATTCCAAGAACAAACGACAAGGGTGCACACAAGCTTAACTCAAATCCTCGTACAA
ACCCAAAAATACAAGTACAAAGCAAAGCTACAAAATCCTCGACAAAAGTTCTTAGTGAAAAGGTATCTAACGTGCCACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAA
TATTATGACAGCGACAAAGATGGTTTTCTCAACATAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCGCAGTACGCTATGACTTT
TGCTGATGCTAATAATGATGGTCTTATTAGTGAAGCTGAGCTTGAAAAACTCATAGATTATGCCTATAAAATTATCAAGAAGAAATGA

mRNA sequence

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Protein sequence

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MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTNDKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFK
YYDSDKDGFLNIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK

CmoCh12G004790 (gene) of Cucurbita moschata (Rifu) v1 genome