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CmoCh12G004830 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004830
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr12:2973864..2974127
RNA-Seq ExpressionCmoCh12G004830
SyntenyCmoCh12G004830
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]3.6e-2873.49Show/hide
Query:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFE
        MA   V K N SREEMKEIFREHD+DGDGYL+I EL+KA GF GH IPFYKAHYG+A++D+N DGL+SEDEL+KLIDYA+R E
Subjt:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFE

KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]4.3e-2665.06Show/hide
Query:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        RA  KL LSRE++KEIFREHD+DGDG L+++E+VKAFGF G ++PFYKAHYG+A AD+N DG + E+EL+KL+DYA++F+HK+
Subjt:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]3.7e-2563.86Show/hide
Query:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        RA  +L LSRE++KEIFREHD+DGDG L++NE+VKAFG  G ++PFYKAHYG+A AD+N DG + E+EL+KL+DYA++F+HK+
Subjt:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]1.2e-2870.93Show/hide
Query:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        MA   V K N SREEMKEIFREHD+DGDGYL+I+EL+KA GF GH IPFYKAHYG+A+ D+N DGL+SEDEL+KLIDYA+RF+ ++
Subjt:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.4e-2464.56Show/hide
Query:  KLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        +L LSRE++KEIFREHD+DGDG L++NE+VKAFG  G ++PFYKAHYG+A AD+N DG + E+EL+KL+DYA++F+HK+
Subjt:  KLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein5.9e-2970.93Show/hide
Query:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        MA   V K N SREEMKEIFREHD+DGDGYL+I+EL+KA GF GH IPFYKAHYG+A+ D+N DGL+SEDEL+KLIDYA+RF+ ++
Subjt:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

A0A0A0LRC1 Uncharacterized protein1.8e-2563.86Show/hide
Query:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        RA  +L LSRE++KEIFREHD+DGDG L++NE+VKAFG  G ++PFYKAHYG+A AD+N DG + E+EL+KL+DYA++F+HK+
Subjt:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

A0A5A7UYC0 Putative calcium-binding protein CML102.1e-2665.06Show/hide
Query:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        RA  KL LSRE++KEIFREHD+DGDG L+++E+VKAFGF G ++PFYKAHYG+A AD+N DG + E+EL+KL+DYA++F+HK+
Subjt:  RAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

A0A5A7V2Z9 Putative calcium-binding protein CML101.7e-2873.49Show/hide
Query:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFE
        MA   V K N SREEMKEIFREHD+DGDGYL+I EL+KA GF GH IPFYKAHYG+A++D+N DGL+SEDEL+KLIDYA+R E
Subjt:  MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFE

A0A6J1KUW2 calmodulin-like1.1e-2265.38Show/hide
Query:  LNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK
        + LSR ++KEIF EHD+DGDGYL+++EL KAF F G +IP YKAHYGLA+AD + DGL+SE+ELEKL+DYA+R   KK
Subjt:  LNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTCGTGCTGTAGGCAAGCTCAACCTCTCCAGGGAAGAAATGAAGGAGATCTTCCGAGAGCACGACGTTGATGGAGATGGTTACCTCAACATCAACGAGCTCGT
CAAAGCGTTCGGGTTTTGCGGTCATGTTATCCCATTTTACAAAGCTCACTATGGACTAGCTTTTGCTGATGACAACTGCGATGGCCTCGTTTCAGAAGACGAGCTGGAGA
AACTGATTGACTATGCCAAAAGGTTTGAGCACAAGAAGCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTCGTGCTGTAGGCAAGCTCAACCTCTCCAGGGAAGAAATGAAGGAGATCTTCCGAGAGCACGACGTTGATGGAGATGGTTACCTCAACATCAACGAGCTCGT
CAAAGCGTTCGGGTTTTGCGGTCATGTTATCCCATTTTACAAAGCTCACTATGGACTAGCTTTTGCTGATGACAACTGCGATGGCCTCGTTTCAGAAGACGAGCTGGAGA
AACTGATTGACTATGCCAAAAGGTTTGAGCACAAGAAGCATTAA
Protein sequenceShow/hide protein sequence
MAGRAVGKLNLSREEMKEIFREHDVDGDGYLNINELVKAFGFCGHVIPFYKAHYGLAFADDNCDGLVSEDELEKLIDYAKRFEHKKH