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CmoCh12G004840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr12:2978072..2978473
RNA-Seq ExpressionCmoCh12G004840
SyntenyCmoCh12G004840
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060891.1 putative calcium-binding protein CML36 [Cucumis melo var. makuwa]6.6e-2656.45Show/hide
Query:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC
        LQ+PLSEKEA+ VLK+RD N DG+L+K+ELM DL     +PS     ++LTREEIKEIF+  DIDGDG LS  EV +AF  MGS     K  + +A AD 
Subjt:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC

Query:  DGDGVISEEELDKLVDYFEKTNKK
        DGDG+ISE EL+KL+DY ++TN +
Subjt:  DGDGVISEEELDKLVDYFEKTNKK

XP_008445562.1 PREDICTED: probable calcium-binding protein CML36 [Cucumis melo]1.9e-2555.65Show/hide
Query:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC
        LQ+PLSEKEA+ V K+RD N DG+L+K+ELM DL     +PS     ++LTREEIKEIF+  DIDGDG LS  EV +AF  MGS     K  + +A AD 
Subjt:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC

Query:  DGDGVISEEELDKLVDYFEKTNKK
        DGDG+ISE EL+KL+DY ++TN +
Subjt:  DGDGVISEEELDKLVDYFEKTNKK

XP_022951882.1 probable calcium-binding protein CML15 [Cucurbita moschata]4.5e-67100Show/hide
Query:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
        MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
Subjt:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG

Query:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
        DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
Subjt:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV

XP_023002890.1 probable calcium-binding protein CML15 [Cucurbita maxima]1.0e-6393.98Show/hide
Query:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
        MES+QEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTRE+IKEIFLEHDIDGDGCLSV E++KAFNFMGSSLSFHKARHG+ALADCDG
Subjt:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG

Query:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
        DG+ISEEELDKLVDYFEKTNKKCLKRVVP RSV
Subjt:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV

XP_038885760.1 probable calcium-binding protein CML36 [Benincasa hispida]1.5e-2555.56Show/hide
Query:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RP----SKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC
        LQRPLSEKEA+ VL++RD N DGVL+K+ELM DL     +P      + LTREEI+EIF   DIDGDG L+  E+T+AF  +GS     KA + +  AD 
Subjt:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RP----SKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC

Query:  DGDGVISEEELDKLVDYFEKTNKKCL
        DGDG+ISE EL+KL+DY EKTN++ L
Subjt:  DGDGVISEEELDKLVDYFEKTNKKCL

TrEMBL top hitse value%identityAlignment
A0A0A0LP46 Uncharacterized protein6.1e-2555.12Show/hide
Query:  ESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHG
        +S+   LQ+PLSEKEA+ +L++RD N DGVL+K+ELM DL     +PS     ++LTREEIKEIF+  DIDGDG LS  EV +AF  MGS     KA + 
Subjt:  ESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHG

Query:  LALADCDGDGVISEEELDKLVDYFEKT
        +A AD DGDG ISE EL+KL+DY ++T
Subjt:  LALADCDGDGVISEEELDKLVDYFEKT

A0A1S3BD12 probable calcium-binding protein CML369.4e-2655.65Show/hide
Query:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC
        LQ+PLSEKEA+ V K+RD N DG+L+K+ELM DL     +PS     ++LTREEIKEIF+  DIDGDG LS  EV +AF  MGS     K  + +A AD 
Subjt:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC

Query:  DGDGVISEEELDKLVDYFEKTNKK
        DGDG+ISE EL+KL+DY ++TN +
Subjt:  DGDGVISEEELDKLVDYFEKTNKK

A0A5A7V530 Putative calcium-binding protein CML363.2e-2656.45Show/hide
Query:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC
        LQ+PLSEKEA+ VLK+RD N DG+L+K+ELM DL     +PS     ++LTREEIKEIF+  DIDGDG LS  EV +AF  MGS     K  + +A AD 
Subjt:  LQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-----RPS----KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADC

Query:  DGDGVISEEELDKLVDYFEKTNKK
        DGDG+ISE EL+KL+DY ++TN +
Subjt:  DGDGVISEEELDKLVDYFEKTNKK

A0A6J1GIW2 probable calcium-binding protein CML152.2e-67100Show/hide
Query:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
        MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
Subjt:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG

Query:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
        DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
Subjt:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV

A0A6J1KQ84 probable calcium-binding protein CML155.1e-6493.98Show/hide
Query:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG
        MES+QEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTRE+IKEIFLEHDIDGDGCLSV E++KAFNFMGSSLSFHKARHG+ALADCDG
Subjt:  MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDG

Query:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV
        DG+ISEEELDKLVDYFEKTNKKCLKRVVP RSV
Subjt:  DGVISEEELDKLVDYFEKTNKKCLKRVVPKRSV

SwissProt top hitse value%identityAlignment
O23320 Calmodulin-like protein 83.0e-0529.46Show/hide
Query:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD
        I+ + Q P  ++  D + ++ D++ +G +E  E +N L   KLQ +   EE+KE F   D D +G +S  E++     +G  L+  +    +  AD DGD
Subjt:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD

Query:  GVISEEELDKLV
        G ++ +E  K++
Subjt:  GVISEEELDKLV

P05933 Calmodulin1.8e-0530.19Show/hide
Query:  QRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-RPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEE
        Q P + +  D + ++ D + +G ++  E +  + R  K     EE++E F   D DG+G ++V E+T     +G  LS  +    +  AD DGDGVI+ E
Subjt:  QRPLSEKEADCVLKLRDTNKDGVLEKKELMNDL-RPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEE

Query:  ELDKLV
        E  +++
Subjt:  ELDKLV

P62184 Calmodulin3.9e-0530.39Show/hide
Query:  SEKEADCVLKLRDTNKDGVLEKKELMNDL-RPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDK
        +E E   ++   D + DG ++  E +  + R  K   + EEI+E F   D DGDG +S  E+      +G  L+  +    +  AD DGDG ++ EE  K
Subjt:  SEKEADCVLKLRDTNKDGVLEKKELMNDL-RPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDK

Query:  LV
        ++
Subjt:  LV

Q6L4D4 Probable calcium-binding protein CML151.0e-0531.43Show/hide
Query:  PLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGE--VTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEE
        P +E E + V +  D N DG + + EL    R     +T +E+  +  E D DGDG +S+GE     A     ++ +    RH   + D DG+GVI+  E
Subjt:  PLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGE--VTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEE

Query:  LDKLV
        L +++
Subjt:  LDKLV

Q9JM83 Calmodulin-41.0e-0527.52Show/hide
Query:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGV
        + + L + L EK+   ++   DT+ DG +  +E +  +   K      E++ +F   D +GDG ++V E+ ++ + +G SLS  +    + +AD D DG 
Subjt:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGV

Query:  ISEEELDKL
        +  EE  +L
Subjt:  ISEEELDKL

Arabidopsis top hitse value%identityAlignment
AT3G03000.1 EF hand calcium-binding protein family1.1e-0528.57Show/hide
Query:  SEKEADCVLKLRDTNKDGVLEKKELMNDLRPS--KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEE
        S+ + D +++  D N +G++E  E +  + P   K   T +++K IF   D DG+G ++  E+  +   +G +L+  +    +  AD DGDG I  +E
Subjt:  SEKEADCVLKLRDTNKDGVLEKKELMNDLRPS--KLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEE

AT3G22930.1 calmodulin-like 111.8e-0528.57Show/hide
Query:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD
        I+ + Q P  ++  D + ++ D++ +G +E  E +N L  ++LQ T   EE+KE F   D D +G +S  E+      +G  L+  +    +  AD DGD
Subjt:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD

Query:  GVISEEELDKLV
        G ++ +E  +++
Subjt:  GVISEEELDKLV

AT3G51920.1 calmodulin 91.4e-0536.51Show/hide
Query:  EEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLV
        +E+ E+F   D DGDG +S  E+ +    MG  ++  +A H +  AD DGDG +S  E  K++
Subjt:  EEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELDKLV

AT4G14640.1 calmodulin 82.1e-0629.46Show/hide
Query:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD
        I+ + Q P  ++  D + ++ D++ +G +E  E +N L   KLQ +   EE+KE F   D D +G +S  E++     +G  L+  +    +  AD DGD
Subjt:  IQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLT--REEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGD

Query:  GVISEEELDKLV
        G ++ +E  K++
Subjt:  GVISEEELDKLV

AT5G17470.1 EF hand calcium-binding protein family1.4e-0532.95Show/hide
Query:  DTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHK---ARHGLALADCDGDGVISEEEL
        D NKDG +   E    +R     +T EEI  +F E D+DGD  + V E        G      +    +    L D DGDG IS  E+
Subjt:  DTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHK---ARHGLALADCDGDGVISEEEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCATTCAAGAAATACTCCAAAGGCCTCTATCTGAGAAGGAAGCAGACTGTGTGCTGAAGCTTCGTGATACCAACAAAGATGGCGTTCTTGAGAAGAAGGAGCT
GATGAATGACTTGAGGCCCTCCAAACTACAGCTCACTCGGGAGGAGATCAAAGAGATTTTCCTAGAACACGACATCGATGGAGATGGTTGTCTTAGTGTCGGTGAGGTAA
CTAAGGCCTTCAATTTCATGGGTTCTTCGCTCTCGTTTCATAAAGCTCGTCATGGCTTGGCTCTTGCTGATTGTGATGGCGATGGCGTTATTAGCGAGGAGGAACTTGAT
AAACTCGTTGATTATTTCGAGAAAACCAACAAGAAGTGTTTAAAGAGAGTGGTTCCAAAAAGAAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCATTCAAGAAATACTCCAAAGGCCTCTATCTGAGAAGGAAGCAGACTGTGTGCTGAAGCTTCGTGATACCAACAAAGATGGCGTTCTTGAGAAGAAGGAGCT
GATGAATGACTTGAGGCCCTCCAAACTACAGCTCACTCGGGAGGAGATCAAAGAGATTTTCCTAGAACACGACATCGATGGAGATGGTTGTCTTAGTGTCGGTGAGGTAA
CTAAGGCCTTCAATTTCATGGGTTCTTCGCTCTCGTTTCATAAAGCTCGTCATGGCTTGGCTCTTGCTGATTGTGATGGCGATGGCGTTATTAGCGAGGAGGAACTTGAT
AAACTCGTTGATTATTTCGAGAAAACCAACAAGAAGTGTTTAAAGAGAGTGGTTCCAAAAAGAAGTGTTTAA
Protein sequenceShow/hide protein sequence
MESIQEILQRPLSEKEADCVLKLRDTNKDGVLEKKELMNDLRPSKLQLTREEIKEIFLEHDIDGDGCLSVGEVTKAFNFMGSSLSFHKARHGLALADCDGDGVISEEELD
KLVDYFEKTNKKCLKRVVPKRSV